RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 PRAMEF6Q5VXH4 476 aa18.36■□□□□ 0.53
RNF40-203ENST00000493683 RPS19BP1Q86WX3 136 aaKnown RBP18.36■□□□□ 0.53
RNF40-203ENST00000493683 UQCC2Q9BRT2 126 aa18.36■□□□□ 0.53
RNF40-203ENST00000493683 FAM234AQ9H0X4 552 aa18.36■□□□□ 0.53
RNF40-203ENST00000493683 ZNF355PQ9NSJ1 428 aa18.36■□□□□ 0.53
RNF40-203ENST00000493683 LIN7CQ9NUP9 197 aaKnown RBP18.36■□□□□ 0.53
RNF40-203ENST00000493683 CDK5R1Q15078 307 aa18.36■□□□□ 0.53
RNF40-203ENST00000493683 ADAM5Q6NVV9 412 aa18.36■□□□□ 0.53
RNF40-203ENST00000493683 CPEB2Q7Z5Q1 589 aaKnown RBP18.36■□□□□ 0.53
RNF40-203ENST00000493683 OR5M8Q8NGP6 311 aa18.36■□□□□ 0.53
RNF40-203ENST00000493683 GPX8Q8TED1 209 aa18.36■□□□□ 0.53
RNF40-203ENST00000493683 PRR14Q9BWN1 585 aa18.36■□□□□ 0.53
RNF40-203ENST00000493683 ACTR3CQ9C0K3 210 aaPredicted RBP18.36■□□□□ 0.53
RNF40-203ENST00000493683 DLL4Q9NR61 685 aa18.36■□□□□ 0.53
RNF40-203ENST00000493683 SLC25A37Q9NYZ2 338 aa18.36■□□□□ 0.53
RNF40-203ENST00000493683 TOPAZ1Q8N9V7 1692 aa18.35■□□□□ 0.53
RNF40-203ENST00000493683 EDIL3O43854 480 aa18.35■□□□□ 0.53
RNF40-203ENST00000493683 MGMTP16455 207 aa18.35■□□□□ 0.53
RNF40-203ENST00000493683 EN2P19622 333 aaPredicted RBP18.35■□□□□ 0.53
RNF40-203ENST00000493683 CSN1S1P47710 185 aa18.35■□□□□ 0.53
RNF40-203ENST00000493683 RAB13P51153 203 aa18.35■□□□□ 0.53
RNF40-203ENST00000493683 OR13H1Q8NG92 308 aa18.35■□□□□ 0.53
RNF40-203ENST00000493683 C11orf40Q8WZ69 217 aa18.35■□□□□ 0.53
RNF40-203ENST00000493683 MVB12AQ96EY5 273 aa18.35■□□□□ 0.53
RNF40-203ENST00000493683 DEFA4P12838 97 aa18.35■□□□□ 0.53
RNF40-203ENST00000493683 LILRA3Q8N6C8 439 aaPredicted RBP18.35■□□□□ 0.53
RNF40-203ENST00000493683 LINC01465Q8N7H1 131 aa18.35■□□□□ 0.53
RNF40-203ENST00000493683 FYTTD1Q96QD9 318 aaKnown RBP18.35■□□□□ 0.53
RNF40-203ENST00000493683 BANF2Q9H503 90 aa18.35■□□□□ 0.53
RNF40-203ENST00000493683 R4GMQ9 66 aa18.35■□□□□ 0.53
RNF40-203ENST00000493683 OR5H14A6NHG9 310 aa18.35■□□□□ 0.53
RNF40-203ENST00000493683 SH2D1BO14796 132 aa18.35■□□□□ 0.53
RNF40-203ENST00000493683 SLCO4A1Q96BD0 722 aa18.35■□□□□ 0.53
RNF40-203ENST00000493683 IP6K3Q96PC2 410 aa18.35■□□□□ 0.53
RNF40-203ENST00000493683 LAMP3Q9UQV4 416 aa18.35■□□□□ 0.53
RNF40-203ENST00000493683 OR6C68A6NDL8 312 aa18.35■□□□□ 0.53
RNF40-203ENST00000493683 CCSO14618 274 aa18.35■□□□□ 0.53
RNF40-203ENST00000493683 ZNF77Q15935 545 aa18.35■□□□□ 0.53
RNF40-203ENST00000493683 ACKR1Q16570 336 aa18.35■□□□□ 0.53
RNF40-203ENST00000493683 ST8SIA4Q92187 359 aa18.35■□□□□ 0.53
RNF40-203ENST00000493683 PDFQ9HBH1 243 aa18.35■□□□□ 0.53
RNF40-203ENST00000493683 TRAV1-2A0A0B4J238 106 aa18.34■□□□□ 0.53
RNF40-203ENST00000493683 CT45A10P0DMU9 189 aa18.34■□□□□ 0.53
RNF40-203ENST00000493683 SLC2A1P11166 492 aa18.34■□□□□ 0.53
RNF40-203ENST00000493683 H3F3AP84243 136 aa18.34■□□□□ 0.53
RNF40-203ENST00000493683 ACOT6Q3I5F7 207 aaPredicted RBP18.34■□□□□ 0.53
RNF40-203ENST00000493683 RHOUQ7L0Q8 258 aa18.34■□□□□ 0.53
RNF40-203ENST00000493683 DUSP13Q9UII6 198 aa18.34■□□□□ 0.53
RNF40-203ENST00000493683 CXorf51AA0A1B0GTR3 108 aa18.34■□□□□ 0.53
RNF40-203ENST00000493683 PRSS44E7EML9 344 aa18.34■□□□□ 0.53
RNF40-203ENST00000493683 FCGR2CP31995 323 aa18.34■□□□□ 0.53
RNF40-203ENST00000493683 ADGRG3Q86Y34 549 aa18.34■□□□□ 0.53
RNF40-203ENST00000493683 MFSD4AQ8N468 514 aa18.34■□□□□ 0.53
RNF40-203ENST00000493683 CHRDL1Q9BU40 450 aa18.34■□□□□ 0.53
RNF40-203ENST00000493683 HCSTQ9UBK5 93 aa18.34■□□□□ 0.53
RNF40-203ENST00000493683 ZNF346Q9UL40 294 aaKnown RBP18.34■□□□□ 0.53
RNF40-203ENST00000493683 DSCR3O14972 297 aa18.34■□□□□ 0.53
RNF40-203ENST00000493683 PDGFBP01127 241 aaPredicted RBP18.34■□□□□ 0.53
RNF40-203ENST00000493683 ZNF573Q86YE8 665 aa18.34■□□□□ 0.53
RNF40-203ENST00000493683 BPIFCQ8NFQ6 507 aa18.34■□□□□ 0.53
RNF40-203ENST00000493683 OR51F2Q8NH61 342 aa18.34■□□□□ 0.53
RNF40-203ENST00000493683 OR51E1Q8TCB6 317 aa18.34■□□□□ 0.53
RNF40-203ENST00000493683 C12orf10Q9HB07 376 aa18.34■□□□□ 0.53
RNF40-203ENST00000493683 SLC5A6Q9Y289 635 aa18.34■□□□□ 0.53
RNF40-203ENST00000493683 RPL12P30050 165 aaKnown RBP18.34■□□□□ 0.53
RNF40-203ENST00000493683 SLC37A2Q8TED4 501 aa18.34■□□□□ 0.53
RNF40-203ENST00000493683 H1FXQ92522 213 aaKnown RBP18.34■□□□□ 0.53
RNF40-203ENST00000493683 ELSPBP1Q96BH3 223 aa18.34■□□□□ 0.53
RNF40-203ENST00000493683 CDCP1Q9H5V8 836 aa18.34■□□□□ 0.53
RNF40-203ENST00000493683 RGPD8O14715 1765 aaPredicted RBP18.34■□□□□ 0.53
RNF40-203ENST00000493683 SLC19A1P41440 591 aa18.33■□□□□ 0.53
RNF40-203ENST00000493683 PRTGQ2VWP7 1150 aa18.33■□□□□ 0.53
RNF40-203ENST00000493683 NKAIN1Q4KMZ8 207 aa18.33■□□□□ 0.53
RNF40-203ENST00000493683 BAHD1Q8TBE0 780 aaPredicted RBP18.33■□□□□ 0.53
RNF40-203ENST00000493683 KCNE4Q8WWG9 221 aa18.33■□□□□ 0.53
RNF40-203ENST00000493683 C2orf50Q96LR7 162 aa18.33■□□□□ 0.53
RNF40-203ENST00000493683 SOX7Q9BT81 388 aa18.33■□□□□ 0.53
RNF40-203ENST00000493683 NIT2Q9NQR4 276 aa18.33■□□□□ 0.53
RNF40-203ENST00000493683 GPR173Q9NS66 373 aa18.33■□□□□ 0.53
RNF40-203ENST00000493683 RYDENQ9NUL5 291 aaKnown RBP18.33■□□□□ 0.53
RNF40-203ENST00000493683 PTAFRP25105 342 aa18.33■□□□□ 0.53
RNF40-203ENST00000493683 IRS1P35568 1242 aa18.33■□□□□ 0.53
RNF40-203ENST00000493683 ELLP55199 621 aaPredicted RBP18.33■□□□□ 0.53
RNF40-203ENST00000493683 OR8G1Q15617 311 aa18.33■□□□□ 0.53
RNF40-203ENST00000493683 SH3BGRL2Q9UJC5 107 aa18.33■□□□□ 0.53
RNF40-203ENST00000493683 ZNF195O14628 629 aa18.33■□□□□ 0.52
RNF40-203ENST00000493683 HMGA1P17096 107 aaKnown RBP18.33■□□□□ 0.52
RNF40-203ENST00000493683 BAP18Q8IXM2 172 aa18.33■□□□□ 0.52
RNF40-203ENST00000493683 OR8U1Q8NH10 309 aa18.33■□□□□ 0.52
RNF40-203ENST00000493683 AKIP1Q9NQ31 210 aa18.33■□□□□ 0.52
RNF40-203ENST00000493683 PMS2P1A4D2B8 440 aa18.33■□□□□ 0.52
RNF40-203ENST00000493683 TBXA2RP21731 343 aa18.33■□□□□ 0.52
RNF40-203ENST00000493683 OR51H1Q8NH63 302 aa18.33■□□□□ 0.52
RNF40-203ENST00000493683 IGLV3-25P01717 112 aa18.32■□□□□ 0.52
RNF40-203ENST00000493683 QDPRP09417 244 aa18.32■□□□□ 0.52
RNF40-203ENST00000493683 PTCRAQ6ISU1 281 aaPredicted RBP18.32■□□□□ 0.52
RNF40-203ENST00000493683 USP51Q70EK9 711 aa18.32■□□□□ 0.52
RNF40-203ENST00000493683 TCTE3Q8IZS6 198 aa18.32■□□□□ 0.52
RNF40-203ENST00000493683 ZADH2Q8N4Q0 377 aa18.32■□□□□ 0.52
RNF40-203ENST00000493683 ARHGEF39Q8N4T4 335 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms