RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 CPOQ8IVL8 374 aa10.02□□□□□ -0.81
CTSA-209ENST00000493522 ZNF611Q8N823 705 aa10.02□□□□□ -0.81
CTSA-209ENST00000493522 OR4F15Q8NGB8 312 aa10.02□□□□□ -0.81
CTSA-209ENST00000493522 OR1J2Q8NGS2 313 aa10.02□□□□□ -0.81
CTSA-209ENST00000493522 OR2AJ1Q8NGZ0 328 aa10.02□□□□□ -0.81
CTSA-209ENST00000493522 SPATA3Q8NHX4 192 aa10.02□□□□□ -0.81
CTSA-209ENST00000493522 ZNRF4Q8WWF5 429 aa10.02□□□□□ -0.81
CTSA-209ENST00000493522 DHRS9Q9BPW9 319 aa10.02□□□□□ -0.81
CTSA-209ENST00000493522 WACQ9BTA9 647 aa10.02□□□□□ -0.81
CTSA-209ENST00000493522 REPIN1Q9BWE0 567 aaKnown RBP10.02□□□□□ -0.81
CTSA-209ENST00000493522 CDADC1Q9BWV3 514 aa10.02□□□□□ -0.81
CTSA-209ENST00000493522 OR51B6Q9H340 312 aa10.02□□□□□ -0.81
CTSA-209ENST00000493522 FAIMQ9NVQ4 179 aa10.02□□□□□ -0.81
CTSA-209ENST00000493522 PLEK2Q9NYT0 353 aa10.02□□□□□ -0.81
CTSA-209ENST00000493522 LHFPL6Q9Y693 200 aa10.02□□□□□ -0.81
CTSA-209ENST00000493522 COMMD3-BMI1R4GMX3 469 aa10.02□□□□□ -0.81
CTSA-209ENST00000493522 FBN1P35555 2871 aaKnown RBP10.01□□□□□ -0.81
CTSA-209ENST00000493522 TRIM64A6NGJ6 449 aa10.01□□□□□ -0.81
CTSA-209ENST00000493522 TRIM64BA6NI03 449 aa10.01□□□□□ -0.81
CTSA-209ENST00000493522 INAFM1C9JVW0 142 aa10.01□□□□□ -0.81
CTSA-209ENST00000493522 PRODHO43272 600 aa10.01□□□□□ -0.81
CTSA-209ENST00000493522 PRKYO43930 277 aa10.01□□□□□ -0.81
CTSA-209ENST00000493522 GLCEO94923 617 aa10.01□□□□□ -0.81
CTSA-209ENST00000493522 FAM157BP0CG42 384 aa10.01□□□□□ -0.81
CTSA-209ENST00000493522 STOMP27105 288 aa10.01□□□□□ -0.81
CTSA-209ENST00000493522 PEX2P28328 305 aa10.01□□□□□ -0.81
CTSA-209ENST00000493522 POLR2IP36954 125 aaKnown RBP10.01□□□□□ -0.81
CTSA-209ENST00000493522 ENTPD1P49961 510 aa10.01□□□□□ -0.81
CTSA-209ENST00000493522 FABP6P51161 128 aa10.01□□□□□ -0.81
CTSA-209ENST00000493522 BLVRAP53004 296 aa10.01□□□□□ -0.81
CTSA-209ENST00000493522 APOFQ13790 326 aa10.01□□□□□ -0.81
CTSA-209ENST00000493522 LRRC36Q1X8D7 754 aa10.01□□□□□ -0.81
CTSA-209ENST00000493522 LCN1P1Q5VSP4 162 aa10.01□□□□□ -0.81
CTSA-209ENST00000493522 TMEM154Q6P9G4 183 aa10.01□□□□□ -0.81
CTSA-209ENST00000493522 VASH1Q7L8A9 365 aaPredicted RBP10.01□□□□□ -0.81
CTSA-209ENST00000493522 ERI1Q8IV48 349 aaKnown RBP10.01□□□□□ -0.81
CTSA-209ENST00000493522 FBXL14Q8N1E6 418 aa10.01□□□□□ -0.81
CTSA-209ENST00000493522 PAQR4Q8N4S7 273 aaPredicted RBP10.01□□□□□ -0.81
CTSA-209ENST00000493522 TCEANCQ8N8B7 351 aa10.01□□□□□ -0.81
CTSA-209ENST00000493522 ZNF511Q8NB15 262 aa10.01□□□□□ -0.81
CTSA-209ENST00000493522 CPEB3Q8NE35 698 aaKnown RBP10.01□□□□□ -0.81
CTSA-209ENST00000493522 BBS1Q8NFJ9 593 aa10.01□□□□□ -0.81
CTSA-209ENST00000493522 OR6N2Q8NGY6 317 aa10.01□□□□□ -0.81
CTSA-209ENST00000493522 FAM81AQ8TBF8 368 aa10.01□□□□□ -0.81
CTSA-209ENST00000493522 ZMYND19Q96E35 227 aaPredicted RBP10.01□□□□□ -0.81
CTSA-209ENST00000493522 IL4I1Q96RQ9 567 aa10.01□□□□□ -0.81
CTSA-209ENST00000493522 INTS14Q96SY0 518 aa10.01□□□□□ -0.81
CTSA-209ENST00000493522 SLC29A1Q99808 456 aa10.01□□□□□ -0.81
CTSA-209ENST00000493522 GSX2Q9BZM3 304 aa10.01□□□□□ -0.81
CTSA-209ENST00000493522 TOR3AQ9H497 397 aa10.01□□□□□ -0.81
CTSA-209ENST00000493522 IMPAD1Q9NX62 359 aa10.01□□□□□ -0.81
CTSA-209ENST00000493522 KCNG2Q9UJ96 466 aa10.01□□□□□ -0.81
CTSA-209ENST00000493522 NDRG4Q9ULP0 352 aaKnown RBP10.01□□□□□ -0.81
CTSA-209ENST00000493522 SPEF1Q9Y4P9 236 aa10.01□□□□□ -0.81
CTSA-209ENST00000493522 C5orf49A4QMS7 147 aa10□□□□□ -0.81
CTSA-209ENST00000493522 RER1O15258 196 aa10□□□□□ -0.81
CTSA-209ENST00000493522 SNAP29O95721 258 aa10□□□□□ -0.81
CTSA-209ENST00000493522 ZNF35P13682 527 aa10□□□□□ -0.81
CTSA-209ENST00000493522 GSTT1P30711 240 aa10□□□□□ -0.81
CTSA-209ENST00000493522 GGT2P36268 569 aa10□□□□□ -0.81
CTSA-209ENST00000493522 RPS27P42677 84 aaKnown RBP10□□□□□ -0.81
CTSA-209ENST00000493522 CDC42P60953 191 aa10□□□□□ -0.81
CTSA-209ENST00000493522 RPS23P62266 143 aaKnown RBP10□□□□□ -0.81
CTSA-209ENST00000493522 HGFACQ04756 655 aa10□□□□□ -0.81
CTSA-209ENST00000493522 LINC01590Q5TEZ4 76 aa10□□□□□ -0.81
CTSA-209ENST00000493522 LPCAT4Q643R3 524 aa10□□□□□ -0.81
CTSA-209ENST00000493522 SLC18B1Q6NT16 456 aa10□□□□□ -0.81
CTSA-209ENST00000493522 ZNF544Q6NX49 715 aa10□□□□□ -0.81
CTSA-209ENST00000493522 CFAP77Q6ZQR2 320 aa10□□□□□ -0.81
CTSA-209ENST00000493522 GALNT4Q8N4A0 578 aa10□□□□□ -0.81
CTSA-209ENST00000493522 NUP37Q8NFH4 326 aa10□□□□□ -0.81
CTSA-209ENST00000493522 GJC3Q8NFK1 279 aa10□□□□□ -0.81
CTSA-209ENST00000493522 OR1F12Q8NHA8 337 aa10□□□□□ -0.81
CTSA-209ENST00000493522 TMEM163Q8TC26 289 aa10□□□□□ -0.81
CTSA-209ENST00000493522 SMAP2Q8WU79 429 aaPredicted RBP10□□□□□ -0.81
CTSA-209ENST00000493522 TMEM171Q8WVE6 324 aa10□□□□□ -0.81
CTSA-209ENST00000493522 MBOAT4Q96T53 435 aa10□□□□□ -0.81
CTSA-209ENST00000493522 GRIP2Q9C0E4 1043 aa10□□□□□ -0.81
CTSA-209ENST00000493522 HDHD2Q9H0R4 259 aa10□□□□□ -0.81
CTSA-209ENST00000493522 DCLRE1BQ9H816 532 aa10□□□□□ -0.81
CTSA-209ENST00000493522 WDR76Q9H967 626 aa10□□□□□ -0.81
CTSA-209ENST00000493522 CA10Q9NS85 328 aa10□□□□□ -0.81
CTSA-209ENST00000493522 GDF2Q9UK05 429 aaPredicted RBP10□□□□□ -0.81
CTSA-209ENST00000493522 LAMP3Q9UQV4 416 aa10□□□□□ -0.81
CTSA-209ENST00000493522 LOC100509620A0A075B734 347 aa9.99□□□□□ -0.81
CTSA-209ENST00000493522 SYNGR3O43761 229 aa9.99□□□□□ -0.81
CTSA-209ENST00000493522 TLX2O43763 284 aaPredicted RBP9.99□□□□□ -0.81
CTSA-209ENST00000493522 GPRIN2O60269 458 aa9.99□□□□□ -0.81
CTSA-209ENST00000493522 SELENOFO60613 162 aa9.99□□□□□ -0.81
CTSA-209ENST00000493522 TMCC2O75069 709 aa9.99□□□□□ -0.81
CTSA-209ENST00000493522 LCKP06239 509 aa9.99□□□□□ -0.81
CTSA-209ENST00000493522 SOD3P08294 240 aa9.99□□□□□ -0.81
CTSA-209ENST00000493522 COX5BP10606 129 aa9.99□□□□□ -0.81
CTSA-209ENST00000493522 PSKH1P11801 424 aa9.99□□□□□ -0.81
CTSA-209ENST00000493522 SLC2A5P22732 501 aa9.99□□□□□ -0.81
CTSA-209ENST00000493522 NR4A1P22736 598 aa9.99□□□□□ -0.81
CTSA-209ENST00000493522 TTKP33981 857 aa9.99□□□□□ -0.81
CTSA-209ENST00000493522 THBS4P35443 961 aa9.99□□□□□ -0.81
CTSA-209ENST00000493522 NAA10P41227 235 aaPredicted RBP9.99□□□□□ -0.81
CTSA-209ENST00000493522 PTH2RP49190 550 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms