RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 OR6V1Q8N148 313 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 ZNF611Q8N823 705 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 PTP4A1Q93096 173 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 SAMD8Q96LT4 415 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 SLC38A2Q96QD8 506 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 C19orf24Q9BVV8 132 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 RBM4Q9BWF3 364 aaKnown RBP5.83□□□□□ -1.48
VPS52-219ENST00000493379 RACGAP1Q9H0H5 632 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 ESRP2Q9H6T0 727 aaKnown RBP5.83□□□□□ -1.48
VPS52-219ENST00000493379 EGLN3Q9H6Z9 239 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 CMC2Q9NRP2 79 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 PDP1Q9P0J1 537 aaPredicted RBP5.83□□□□□ -1.48
VPS52-219ENST00000493379 FBXL3Q9UKT7 428 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 B9D1Q9UPM9 204 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 POFUT2Q9Y2G5 429 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 FKBP7Q9Y680 259 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 TENM1Q9UKZ4 2725 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 ROS1P08922 2347 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 IGLV1-36A0A0B4J1U3 117 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 IGHV1-18A0A0C4DH31 117 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 OR6C68A6NDL8 312 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 G3V2T6 193 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 OVOL3O00110 214 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 DCTN6O00399 190 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 XKRYO14609 159 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 GNGT2O14610 69 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 HS3ST1O14792 307 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 TPD52L2O43399 206 aaKnown RBP5.82□□□□□ -1.48
VPS52-219ENST00000493379 KHDRBS3O75525 346 aaKnown RBP5.82□□□□□ -1.48
VPS52-219ENST00000493379 UBL3O95164 117 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 FARS2O95363 451 aaKnown RBP5.82□□□□□ -1.48
VPS52-219ENST00000493379 CST2P09228 141 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 COX5BP10606 129 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 CTLA4P16410 223 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 CD53P19397 219 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 DNASE1P24855 282 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 LAP3P28838 519 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 GRK5P34947 590 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 CENPAP49450 140 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 ZNF84P51523 738 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 SLC25A1P53007 311 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 LGALS4P56470 323 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 RAB1AP62820 205 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 DEFA6Q01524 100 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 IL1RL1Q01638 556 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 BSPH1Q075Z2 132 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 ENDOGQ14249 297 aaKnown RBP5.82□□□□□ -1.48
VPS52-219ENST00000493379 ETFDHQ16134 617 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 ZNF672Q499Z4 452 aaPredicted RBP5.82□□□□□ -1.48
VPS52-219ENST00000493379 TEX30Q5JUR7 227 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 C9orf135Q5VTT2 229 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 MBNL2Q5VZF2 373 aaKnown RBP5.82□□□□□ -1.48
VPS52-219ENST00000493379 ACSM5Q6NUN0 579 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 ZNF813Q6ZN06 617 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 RHOUQ7L0Q8 258 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 DTX2Q86UW9 622 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 ZNF584Q8IVC4 421 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 GLB1L2Q8IW92 636 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 SYT14Q8NB59 555 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 NUP37Q8NFH4 326 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 OR2T33Q8NG76 320 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 OR4Q3Q8NH05 313 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 OR52N5Q8NH56 324 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 FGFBP3Q8TAT2 258 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 FANK1Q8TC84 345 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 LRTOMTQ8WZ04 291 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 RASD2Q96D21 266 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 FBXO17Q96EF6 278 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 ZNF570Q96NI8 536 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 ERMAPQ96PL5 475 aaPredicted RBP5.82□□□□□ -1.48
VPS52-219ENST00000493379 TSSK6Q9BXA6 273 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 NUAK2Q9H093 628 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 MARCH7Q9H992 704 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 SLC25A19Q9HC21 320 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 S100A14Q9HCY8 104 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 POLE4Q9NR33 117 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 USE1Q9NZ43 259 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 IL20RAQ9UHF4 553 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 ATPIF1Q9UII2 106 aa5.82□□□□□ -1.48
VPS52-219ENST00000493379 SLC16A7O60669 478 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 SERPINI2O75830 405 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 SLC2A10O95528 541 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 PPP1R3DO95685 299 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 SNAP29O95721 258 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 PLAUP00749 431 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 PTHP01270 115 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 CD8AP01732 235 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 HLA-HP01893 362 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 TFP02787 698 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 HMGN1P05114 100 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 IGFBP1P08833 259 aaPredicted RBP5.81□□□□□ -1.48
VPS52-219ENST00000493379 CECR9P0C854 216 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 GAAP10253 952 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 B4GALT1P15291 398 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 NR4A1P22736 598 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 BLVRAP53004 296 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 CRISP1P54107 249 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 UBE2NP61088 152 aaKnown RBP5.81□□□□□ -1.48
VPS52-219ENST00000493379 PCBD1P61457 104 aa5.81□□□□□ -1.48
VPS52-219ENST00000493379 NKX6-1P78426 367 aaPredicted RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms