RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	SELE	P16581	610 aa		11.43	□□□□□ -0.58
SAMM50-204	ENST00000493161	HTR5A	P47898	357 aa		11.43	□□□□□ -0.58
SAMM50-204	ENST00000493161	RAG2	P55895	527 aa		11.43	□□□□□ -0.58
SAMM50-204	ENST00000493161	GNB2	P62879	340 aa		11.43	□□□□□ -0.58
SAMM50-204	ENST00000493161	NFYC	Q13952	458 aa		11.43	□□□□□ -0.58
SAMM50-204	ENST00000493161	RABL3	Q5HYI8	236 aa		11.43	□□□□□ -0.58
SAMM50-204	ENST00000493161	RUSC1-AS1	Q66K80	236 aa		11.43	□□□□□ -0.58
SAMM50-204	ENST00000493161	SLC27A4	Q6P1M0	643 aa		11.43	□□□□□ -0.58
SAMM50-204	ENST00000493161	FIP1L1	Q6UN15	594 aa	Known RBP	11.43	□□□□□ -0.58
SAMM50-204	ENST00000493161	LYPD2	Q6UXB3	125 aa		11.43	□□□□□ -0.58
SAMM50-204	ENST00000493161	BTNL3	Q6UXE8	466 aa		11.43	□□□□□ -0.58
SAMM50-204	ENST00000493161	VASH1	Q7L8A9	365 aa	Predicted RBP	11.43	□□□□□ -0.58
SAMM50-204	ENST00000493161	MUC20	Q8N307	709 aa	Predicted RBP	11.43	□□□□□ -0.58
SAMM50-204	ENST00000493161	ATG16L2	Q8NAA4	619 aa		11.43	□□□□□ -0.58
SAMM50-204	ENST00000493161	NPEPL1	Q8NDH3	523 aa		11.43	□□□□□ -0.58
SAMM50-204	ENST00000493161	OR51A7	Q8NH64	312 aa		11.43	□□□□□ -0.58
SAMM50-204	ENST00000493161	ZDHHC16	Q969W1	377 aa		11.43	□□□□□ -0.58
SAMM50-204	ENST00000493161	BPIFA2	Q96DR5	249 aa		11.43	□□□□□ -0.58
SAMM50-204	ENST00000493161	CCT8L2	Q96SF2	557 aa		11.43	□□□□□ -0.58
SAMM50-204	ENST00000493161	CITED1	Q99966	193 aa		11.43	□□□□□ -0.58
SAMM50-204	ENST00000493161	CDADC1	Q9BWV3	514 aa		11.43	□□□□□ -0.58
SAMM50-204	ENST00000493161	CHIA	Q9BZP6	476 aa		11.43	□□□□□ -0.58
SAMM50-204	ENST00000493161	NDRG4	Q9ULP0	352 aa	Known RBP	11.43	□□□□□ -0.58
SAMM50-204	ENST00000493161	KIR2DS1	A0A191URI9	304 aa		11.42	□□□□□ -0.58
SAMM50-204	ENST00000493161	ANGPT2	O15123	496 aa		11.42	□□□□□ -0.58
SAMM50-204	ENST00000493161	COX5B	P10606	129 aa		11.42	□□□□□ -0.58
SAMM50-204	ENST00000493161	NR2C1	P13056	603 aa		11.42	□□□□□ -0.58
SAMM50-204	ENST00000493161	IFI30	P13284	250 aa		11.42	□□□□□ -0.58
SAMM50-204	ENST00000493161	PMEL	P40967	661 aa		11.42	□□□□□ -0.58
SAMM50-204	ENST00000493161	FGF12	P61328	243 aa		11.42	□□□□□ -0.58
SAMM50-204	ENST00000493161	HOXA4	Q00056	320 aa	Predicted RBP	11.42	□□□□□ -0.58
SAMM50-204	ENST00000493161	INTS11	Q5TA45	600 aa	Known RBP	11.42	□□□□□ -0.58
SAMM50-204	ENST00000493161	OLFML2A	Q68BL7	652 aa		11.42	□□□□□ -0.58
SAMM50-204	ENST00000493161	OR2T2	Q6IF00	324 aa		11.42	□□□□□ -0.58
SAMM50-204	ENST00000493161	C17orf107	Q6ZR85	190 aa		11.42	□□□□□ -0.58
SAMM50-204	ENST00000493161	SYT9	Q86SS6	491 aa		11.42	□□□□□ -0.58
SAMM50-204	ENST00000493161	FITM2	Q8N6M3	262 aa		11.42	□□□□□ -0.58
SAMM50-204	ENST00000493161	LRRC8C	Q8TDW0	803 aa		11.42	□□□□□ -0.58
SAMM50-204	ENST00000493161	PTP4A1	Q93096	173 aa		11.42	□□□□□ -0.58
SAMM50-204	ENST00000493161	MEGF10	Q96KG7	1140 aa		11.42	□□□□□ -0.58
SAMM50-204	ENST00000493161	PKP2	Q99959	881 aa		11.42	□□□□□ -0.58
SAMM50-204	ENST00000493161	NUDT16L1	Q9BRJ7	211 aa	Known RBP	11.42	□□□□□ -0.58
SAMM50-204	ENST00000493161	BEX1	Q9HBH7	125 aa		11.42	□□□□□ -0.58
SAMM50-204	ENST00000493161	PTTG3P	Q9NZH4	202 aa		11.42	□□□□□ -0.58
SAMM50-204	ENST00000493161	ARMCX1	Q9P291	453 aa		11.42	□□□□□ -0.58
SAMM50-204	ENST00000493161		F5H5P2	479 aa		11.41	□□□□□ -0.58
SAMM50-204	ENST00000493161	FBP2	O00757	339 aa		11.41	□□□□□ -0.58
SAMM50-204	ENST00000493161	SURF4	O15260	269 aa		11.41	□□□□□ -0.58
SAMM50-204	ENST00000493161	MLNR	O43193	412 aa		11.41	□□□□□ -0.58
SAMM50-204	ENST00000493161	SGCE	O43556	437 aa		11.41	□□□□□ -0.58
SAMM50-204	ENST00000493161	DBH	P09172	617 aa		11.41	□□□□□ -0.58
SAMM50-204	ENST00000493161	GUCA1A	P43080	201 aa	Predicted RBP	11.41	□□□□□ -0.58
SAMM50-204	ENST00000493161	PRSS12	P56730	875 aa		11.41	□□□□□ -0.58
SAMM50-204	ENST00000493161	GUCY1A3	Q02108	690 aa		11.41	□□□□□ -0.58
SAMM50-204	ENST00000493161	ZNF404	Q494X3	552 aa		11.41	□□□□□ -0.58
SAMM50-204	ENST00000493161	NANOGP8	Q6NSW7	305 aa		11.41	□□□□□ -0.58
SAMM50-204	ENST00000493161	BRICD5	Q6PL45	260 aa		11.41	□□□□□ -0.58
SAMM50-204	ENST00000493161		Q6YL49	198 aa		11.41	□□□□□ -0.58
SAMM50-204	ENST00000493161	MOGAT3	Q86VF5	341 aa		11.41	□□□□□ -0.58
SAMM50-204	ENST00000493161	CALHM3	Q86XJ0	350 aa		11.41	□□□□□ -0.58
SAMM50-204	ENST00000493161	C1QL4	Q86Z23	238 aa		11.41	□□□□□ -0.58
SAMM50-204	ENST00000493161	C19orf18	Q8NEA5	215 aa		11.41	□□□□□ -0.58
SAMM50-204	ENST00000493161	OR13C2	Q8NGS9	318 aa		11.41	□□□□□ -0.58
SAMM50-204	ENST00000493161	OR4F5	Q8NH21	305 aa		11.41	□□□□□ -0.58
SAMM50-204	ENST00000493161	C10orf82	Q8WW14	230 aa		11.41	□□□□□ -0.58
SAMM50-204	ENST00000493161	RASSF5	Q8WWW0	418 aa		11.41	□□□□□ -0.58
SAMM50-204	ENST00000493161	NEIL1	Q96FI4	390 aa	Predicted RBP	11.41	□□□□□ -0.58
SAMM50-204	ENST00000493161	RABEP2	Q9H5N1	569 aa		11.41	□□□□□ -0.58
SAMM50-204	ENST00000493161	RHCG	Q9UBD6	479 aa		11.41	□□□□□ -0.58
SAMM50-204	ENST00000493161	MIOX	Q9UGB7	285 aa		11.41	□□□□□ -0.58
SAMM50-204	ENST00000493161	ADAM18	Q9Y3Q7	739 aa		11.41	□□□□□ -0.58
SAMM50-204	ENST00000493161		A6NIZ1	184 aa		11.4	□□□□□ -0.58
SAMM50-204	ENST00000493161	C22orf46	C9J442	243 aa		11.4	□□□□□ -0.58
SAMM50-204	ENST00000493161	IMPA2	O14732	288 aa		11.4	□□□□□ -0.58
SAMM50-204	ENST00000493161	SFTPB	P07988	381 aa		11.4	□□□□□ -0.58
SAMM50-204	ENST00000493161	MELTF	P08582	738 aa		11.4	□□□□□ -0.58
SAMM50-204	ENST00000493161	RAC2	P15153	192 aa		11.4	□□□□□ -0.58
SAMM50-204	ENST00000493161	CTLA4	P16410	223 aa		11.4	□□□□□ -0.58
SAMM50-204	ENST00000493161	ZNF26	P17031	533 aa	Predicted RBP	11.4	□□□□□ -0.58
SAMM50-204	ENST00000493161	TUBG1	P23258	451 aa		11.4	□□□□□ -0.58
SAMM50-204	ENST00000493161	YAP1	P46937	504 aa	Known RBP	11.4	□□□□□ -0.58
SAMM50-204	ENST00000493161	PITPNB	P48739	271 aa		11.4	□□□□□ -0.58
SAMM50-204	ENST00000493161	RAP1B	P61224	184 aa		11.4	□□□□□ -0.58
SAMM50-204	ENST00000493161	RAP1A	P62834	184 aa		11.4	□□□□□ -0.58
SAMM50-204	ENST00000493161	SCRN3	Q0VDG4	424 aa		11.4	□□□□□ -0.58
SAMM50-204	ENST00000493161	CCDC92	Q53HC0	331 aa	Predicted RBP	11.4	□□□□□ -0.58
SAMM50-204	ENST00000493161	MEST	Q5EB52	335 aa		11.4	□□□□□ -0.58
SAMM50-204	ENST00000493161	ASPHD2	Q6ICH7	369 aa		11.4	□□□□□ -0.58
SAMM50-204	ENST00000493161	ZNF841	Q6ZN19	808 aa		11.4	□□□□□ -0.58
SAMM50-204	ENST00000493161	NRM	Q8IXM6	262 aa		11.4	□□□□□ -0.58
SAMM50-204	ENST00000493161	OR8G5	Q8NG78	346 aa		11.4	□□□□□ -0.58
SAMM50-204	ENST00000493161	FNDC8	Q8TC99	324 aa		11.4	□□□□□ -0.58
SAMM50-204	ENST00000493161	RBM4B	Q9BQ04	359 aa	Known RBP	11.4	□□□□□ -0.58
SAMM50-204	ENST00000493161	POLR2J2	Q9GZM3	115 aa	Known RBP	11.4	□□□□□ -0.58
SAMM50-204	ENST00000493161	POLR2J3	Q9H1A7	115 aa	Known RBP	11.4	□□□□□ -0.58
SAMM50-204	ENST00000493161	MMP27	Q9H306	513 aa		11.4	□□□□□ -0.58
SAMM50-204	ENST00000493161	TUBG2	Q9NRH3	451 aa		11.4	□□□□□ -0.58
SAMM50-204	ENST00000493161	BAG5	Q9UL15	447 aa		11.4	□□□□□ -0.58
SAMM50-204	ENST00000493161	A4GNT	Q9UNA3	340 aa		11.4	□□□□□ -0.58
SAMM50-204	ENST00000493161	WNK1	Q9H4A3	2382 aa		11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms