RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 DUSP13Q9UII6 198 aa12.04□□□□□ -0.48
CCM2-217ENST00000492883 FZR1Q9UM11 496 aa12.04□□□□□ -0.48
CCM2-217ENST00000492883 GRIP1Q9Y3R0 1128 aa12.04□□□□□ -0.48
CCM2-217ENST00000492883 COMMD3-BMI1R4GMX3 469 aa12.04□□□□□ -0.48
CCM2-217ENST00000492883 PRODHO43272 600 aa12.03□□□□□ -0.48
CCM2-217ENST00000492883 PRKYO43930 277 aa12.03□□□□□ -0.48
CCM2-217ENST00000492883 ABHD16AO95870 558 aa12.03□□□□□ -0.48
CCM2-217ENST00000492883 ANPEPP15144 967 aa12.03□□□□□ -0.48
CCM2-217ENST00000492883 PAX1P15863 534 aa12.03□□□□□ -0.48
CCM2-217ENST00000492883 WNT5AP41221 380 aa12.03□□□□□ -0.48
CCM2-217ENST00000492883 ECH1Q13011 328 aa12.03□□□□□ -0.48
CCM2-217ENST00000492883 APOFQ13790 326 aa12.03□□□□□ -0.48
CCM2-217ENST00000492883 RCN1Q15293 331 aa12.03□□□□□ -0.48
CCM2-217ENST00000492883 SWI5Q1ZZU3 235 aa12.03□□□□□ -0.48
CCM2-217ENST00000492883 ZIK1Q3SY52 487 aaPredicted RBP12.03□□□□□ -0.48
CCM2-217ENST00000492883 SLC35D3Q5M8T2 416 aa12.03□□□□□ -0.48
CCM2-217ENST00000492883 C12orf73Q69YU5 71 aa12.03□□□□□ -0.48
CCM2-217ENST00000492883 C11orf71Q6IPW1 123 aa12.03□□□□□ -0.48
CCM2-217ENST00000492883 CFAP77Q6ZQR2 320 aa12.03□□□□□ -0.48
CCM2-217ENST00000492883 DCXRQ7Z4W1 244 aa12.03□□□□□ -0.48
CCM2-217ENST00000492883 ERI1Q8IV48 349 aaKnown RBP12.03□□□□□ -0.48
CCM2-217ENST00000492883 TCEANCQ8N8B7 351 aa12.03□□□□□ -0.48
CCM2-217ENST00000492883 BBS1Q8NFJ9 593 aa12.03□□□□□ -0.48
CCM2-217ENST00000492883 ABHD4Q8TB40 342 aa12.03□□□□□ -0.48
CCM2-217ENST00000492883 ZMYND19Q96E35 227 aaPredicted RBP12.03□□□□□ -0.48
CCM2-217ENST00000492883 IL4I1Q96RQ9 567 aa12.03□□□□□ -0.48
CCM2-217ENST00000492883 INTS14Q96SY0 518 aa12.03□□□□□ -0.48
CCM2-217ENST00000492883 COQ7Q99807 217 aa12.03□□□□□ -0.48
CCM2-217ENST00000492883 SYT3Q9BQG1 590 aa12.03□□□□□ -0.48
CCM2-217ENST00000492883 CXXC4Q9H2H0 198 aa12.03□□□□□ -0.48
CCM2-217ENST00000492883 CENPMQ9NSP4 180 aa12.03□□□□□ -0.48
CCM2-217ENST00000492883 FBXO9Q9UK97 447 aaPredicted RBP12.03□□□□□ -0.48
CCM2-217ENST00000492883 TMEM129A0AVI4 362 aa12.02□□□□□ -0.49
CCM2-217ENST00000492883 F5H5K5 113 aa12.02□□□□□ -0.49
CCM2-217ENST00000492883 M0R129 80 aa12.02□□□□□ -0.49
CCM2-217ENST00000492883 DBHP09172 617 aa12.02□□□□□ -0.49
CCM2-217ENST00000492883 GCH1P30793 250 aa12.02□□□□□ -0.49
CCM2-217ENST00000492883 ERVS71-1P61550 626 aa12.02□□□□□ -0.49
CCM2-217ENST00000492883 PPP1CBP62140 327 aa12.02□□□□□ -0.49
CCM2-217ENST00000492883 TAF13Q15543 124 aa12.02□□□□□ -0.49
CCM2-217ENST00000492883 MSMPQ1L6U9 139 aa12.02□□□□□ -0.49
CCM2-217ENST00000492883 ZNF718Q3SXZ3 478 aa12.02□□□□□ -0.49
CCM2-217ENST00000492883 TEX30Q5JUR7 227 aa12.02□□□□□ -0.49
CCM2-217ENST00000492883 SHEQ5VZ18 495 aa12.02□□□□□ -0.49
CCM2-217ENST00000492883 SHFQ7M4L6 423 aa12.02□□□□□ -0.49
CCM2-217ENST00000492883 C1orf174Q8IYL3 243 aa12.02□□□□□ -0.49
CCM2-217ENST00000492883 ZNF101Q8IZC7 436 aa12.02□□□□□ -0.49
CCM2-217ENST00000492883 OR6N2Q8NGY6 317 aa12.02□□□□□ -0.49
CCM2-217ENST00000492883 SYNPRQ8TBG9 265 aa12.02□□□□□ -0.49
CCM2-217ENST00000492883 TMEM163Q8TC26 289 aa12.02□□□□□ -0.49
CCM2-217ENST00000492883 MAP6Q96JE9 813 aa12.02□□□□□ -0.49
CCM2-217ENST00000492883 DCLRE1CQ96SD1 692 aaKnown RBP12.02□□□□□ -0.49
CCM2-217ENST00000492883 DOK1Q99704 481 aa12.02□□□□□ -0.49
CCM2-217ENST00000492883 SLC29A1Q99808 456 aa12.02□□□□□ -0.49
CCM2-217ENST00000492883 ATF6BQ99941 703 aa12.02□□□□□ -0.49
CCM2-217ENST00000492883 VRK1Q99986 396 aaPredicted RBP12.02□□□□□ -0.49
CCM2-217ENST00000492883 MRPL37Q9BZE1 423 aaKnown RBP12.02□□□□□ -0.49
CCM2-217ENST00000492883 DYNLRB1Q9NP97 96 aa12.02□□□□□ -0.49
CCM2-217ENST00000492883 TBCCD1Q9NVR7 557 aa12.02□□□□□ -0.49
CCM2-217ENST00000492883 ATPIF1Q9UII2 106 aa12.02□□□□□ -0.49
CCM2-217ENST00000492883 CRYBG3Q68DQ2 2970 aa12.02□□□□□ -0.49
CCM2-217ENST00000492883 A0A1W2PPW3 197 aa12.01□□□□□ -0.49
CCM2-217ENST00000492883 NGFP01138 241 aa12.01□□□□□ -0.49
CCM2-217ENST00000492883 EVX1P49640 407 aa12.01□□□□□ -0.49
CCM2-217ENST00000492883 CDC42P60953 191 aa12.01□□□□□ -0.49
CCM2-217ENST00000492883 EFNB1P98172 346 aa12.01□□□□□ -0.49
CCM2-217ENST00000492883 EIF2B1Q14232 305 aaKnown RBP12.01□□□□□ -0.49
CCM2-217ENST00000492883 TESK1Q15569 626 aa12.01□□□□□ -0.49
CCM2-217ENST00000492883 PCK2Q16822 640 aa12.01□□□□□ -0.49
CCM2-217ENST00000492883 LRRC36Q1X8D7 754 aa12.01□□□□□ -0.49
CCM2-217ENST00000492883 Q5PR19 223 aa12.01□□□□□ -0.49
CCM2-217ENST00000492883 SPATA46Q5T0L3 261 aa12.01□□□□□ -0.49
CCM2-217ENST00000492883 LCN1P1Q5VSP4 162 aa12.01□□□□□ -0.49
CCM2-217ENST00000492883 DPY19L4Q7Z388 723 aa12.01□□□□□ -0.49
CCM2-217ENST00000492883 BCDIN3DQ7Z5W3 292 aaKnown RBP12.01□□□□□ -0.49
CCM2-217ENST00000492883 LRP11Q86VZ4 500 aa12.01□□□□□ -0.49
CCM2-217ENST00000492883 TIGD4Q8IY51 512 aa12.01□□□□□ -0.49
CCM2-217ENST00000492883 SLC25A40Q8TBP6 338 aa12.01□□□□□ -0.49
CCM2-217ENST00000492883 TEAD3Q99594 435 aa12.01□□□□□ -0.49
CCM2-217ENST00000492883 TOR3AQ9H497 397 aa12.01□□□□□ -0.49
CCM2-217ENST00000492883 PNRC2Q9NPJ4 139 aaKnown RBP12.01□□□□□ -0.49
CCM2-217ENST00000492883 IMPAD1Q9NX62 359 aa12.01□□□□□ -0.49
CCM2-217ENST00000492883 SETXQ7Z333 2677 aaKnown RBP12.01□□□□□ -0.49
CCM2-217ENST00000492883 PRR14LQ5THK1 2151 aa12.01□□□□□ -0.49
CCM2-217ENST00000492883 H7C417 338 aa12□□□□□ -0.49
CCM2-217ENST00000492883 SELENOFO60613 162 aa12□□□□□ -0.49
CCM2-217ENST00000492883 NDUFS7O75251 213 aa12□□□□□ -0.49
CCM2-217ENST00000492883 ERCC1P07992 297 aaPredicted RBP12□□□□□ -0.49
CCM2-217ENST00000492883 ADRA2AP08913 450 aa12□□□□□ -0.49
CCM2-217ENST00000492883 PSKH1P11801 424 aa12□□□□□ -0.49
CCM2-217ENST00000492883 ZNF250P15622 560 aa12□□□□□ -0.49
CCM2-217ENST00000492883 SLC2A5P22732 501 aa12□□□□□ -0.49
CCM2-217ENST00000492883 NAA10P41227 235 aaPredicted RBP12□□□□□ -0.49
CCM2-217ENST00000492883 TPTEP56180 551 aa12□□□□□ -0.49
CCM2-217ENST00000492883 KLF3P57682 345 aaPredicted RBP12□□□□□ -0.49
CCM2-217ENST00000492883 ELF3P78545 371 aaPredicted RBP12□□□□□ -0.49
CCM2-217ENST00000492883 TRIP10Q15642 601 aa12□□□□□ -0.49
CCM2-217ENST00000492883 MOGQ16653 247 aa12□□□□□ -0.49
CCM2-217ENST00000492883 NXNL2Q5VZ03 156 aa12□□□□□ -0.49
CCM2-217ENST00000492883 PRSS57Q6UWY2 283 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms