RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 SMAD7O15105 426 aaKnown RBP9.14□□□□□ -0.95
CDC42SE1-206ENST00000492796 RER1O15258 196 aa9.14□□□□□ -0.95
CDC42SE1-206ENST00000492796 ABHD16AO95870 558 aa9.14□□□□□ -0.95
CDC42SE1-206ENST00000492796 TFP02787 698 aa9.14□□□□□ -0.95
CDC42SE1-206ENST00000492796 ZNF823P16415 610 aa9.14□□□□□ -0.95
CDC42SE1-206ENST00000492796 GCH1P30793 250 aa9.14□□□□□ -0.95
CDC42SE1-206ENST00000492796 RGS6P49758 472 aa9.14□□□□□ -0.95
CDC42SE1-206ENST00000492796 PDLIM4P50479 330 aa9.14□□□□□ -0.95
CDC42SE1-206ENST00000492796 BLVRAP53004 296 aa9.14□□□□□ -0.95
CDC42SE1-206ENST00000492796 ERVS71-1P61550 626 aa9.14□□□□□ -0.95
CDC42SE1-206ENST00000492796 CRMP1Q14194 572 aa9.14□□□□□ -0.95
CDC42SE1-206ENST00000492796 NKPD1Q17RQ9 610 aa9.14□□□□□ -0.95
CDC42SE1-206ENST00000492796 ZNF718Q3SXZ3 478 aa9.14□□□□□ -0.95
CDC42SE1-206ENST00000492796 CCDC92Q53HC0 331 aaPredicted RBP9.14□□□□□ -0.95
CDC42SE1-206ENST00000492796 ELFN2Q5R3F8 820 aa9.14□□□□□ -0.95
CDC42SE1-206ENST00000492796 MBNL2Q5VZF2 373 aaKnown RBP9.14□□□□□ -0.95
CDC42SE1-206ENST00000492796 SLC18B1Q6NT16 456 aa9.14□□□□□ -0.95
CDC42SE1-206ENST00000492796 RFPL4BQ6ZWI9 263 aa9.14□□□□□ -0.95
CDC42SE1-206ENST00000492796 LRP11Q86VZ4 500 aa9.14□□□□□ -0.95
CDC42SE1-206ENST00000492796 HIPK1Q86Z02 1210 aa9.14□□□□□ -0.95
CDC42SE1-206ENST00000492796 HS3ST5Q8IZT8 346 aa9.14□□□□□ -0.95
CDC42SE1-206ENST00000492796 CYB561A3Q8NBI2 242 aa9.14□□□□□ -0.95
CDC42SE1-206ENST00000492796 ICA1LQ8NDH6 482 aa9.14□□□□□ -0.95
CDC42SE1-206ENST00000492796 OR1F12Q8NHA8 337 aa9.14□□□□□ -0.95
CDC42SE1-206ENST00000492796 SNX33Q8WV41 574 aa9.14□□□□□ -0.95
CDC42SE1-206ENST00000492796 PIMREGQ9BSJ6 248 aa9.14□□□□□ -0.95
CDC42SE1-206ENST00000492796 CDADC1Q9BWV3 514 aa9.14□□□□□ -0.95
CDC42SE1-206ENST00000492796 TEX12Q9BXU0 123 aa9.14□□□□□ -0.95
CDC42SE1-206ENST00000492796 REG4Q9BYZ8 158 aa9.14□□□□□ -0.95
CDC42SE1-206ENST00000492796 NMNAT2Q9BZQ4 307 aa9.14□□□□□ -0.95
CDC42SE1-206ENST00000492796 MYEF2Q9P2K5 600 aaKnown RBP9.14□□□□□ -0.95
CDC42SE1-206ENST00000492796 CGGBP1Q9UFW8 167 aaPredicted RBP9.14□□□□□ -0.95
CDC42SE1-206ENST00000492796 CYB5R1Q9UHQ9 305 aa9.14□□□□□ -0.95
CDC42SE1-206ENST00000492796 FZR1Q9UM11 496 aa9.14□□□□□ -0.95
CDC42SE1-206ENST00000492796 IGHV4-30-2A0A087WSY4 118 aa9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 LOC390937A0A1W2PQ73 354 aa9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 RNF223E7ERA6 249 aa9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 LY6HO94772 140 aa9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 CLPTM1O96005 669 aa9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 IGHV3-13P01766 116 aa9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 MT-ND5P03915 603 aa9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 HMGN1P05114 100 aa9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 HEXAP06865 529 aa9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 SPI1P17947 270 aa9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 PAICSP22234 425 aaKnown RBP9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 FMO3P31513 532 aa9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 PYCR1P32322 319 aa9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 GGT2P36268 569 aa9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 ALDH3B1P43353 468 aa9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 PPP1CBP62140 327 aa9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 ECH1Q13011 328 aa9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 OTPQ5XKR4 325 aa9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 FAHD1Q6P587 224 aa9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 CLEC9AQ6UXN8 241 aa9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 PARP8Q8N3A8 854 aa9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 IQCF1Q8N6M8 205 aa9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 OR9Q1Q8NGQ5 310 aa9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 OR2AJ1Q8NGZ0 328 aa9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 SLC25A40Q8TBP6 338 aa9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 C10orf105Q8TEF2 133 aa9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 MARS2Q96GW9 593 aaKnown RBP9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 OR2J1Q9GZK6 312 aa9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 GABARAPL1Q9H0R8 117 aa9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 TPK1Q9H3S4 243 aa9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 SLC25A19Q9HC21 320 aa9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 PAPOLBQ9NRJ5 636 aaKnown RBP9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 MRPL22Q9NWU5 206 aaKnown RBP9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 TAAR3PQ9P1P4 343 aa9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 COMMD3-BMI1R4GMX3 469 aa9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 MAP1AP78559 2803 aaPredicted RBP9.13□□□□□ -0.95
CDC42SE1-206ENST00000492796 A0A096LNT2 108 aa9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 C17orf100A8MU93 164 aa9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 VWC2LB2RUY7 222 aa9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 G3V2T6 193 aa9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 SURF4O15260 269 aa9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 NGFP01138 241 aa9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 DAOP14920 347 aa9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 PRKACGP22612 351 aa9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 POU1F1P28069 291 aa9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 LIPAP38571 399 aa9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 ACTR3P61158 418 aa9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 CDK5Q00535 292 aa9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 LOXL1Q08397 574 aaPredicted RBP9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 GINS1Q14691 196 aa9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 MAD2L1BPQ15013 274 aaPredicted RBP9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 PCGF3Q3KNV8 242 aa9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 ZMAT1Q5H9K5 638 aa9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 TEX30Q5JUR7 227 aa9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 SPATA46Q5T0L3 261 aa9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 TMEM154Q6P9G4 183 aa9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 CORO6Q6QEF8 472 aa9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 CFAP77Q6ZQR2 320 aa9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 ZDHHC13Q8IUH4 622 aa9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 LINC00346Q8IVM7 164 aa9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 ZCCHC24Q8N2G6 241 aaKnown RBP9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 ZNF786Q8N393 782 aa9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 ZNF540Q8NDQ6 660 aa9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 KLF14Q8TD94 323 aaPredicted RBP9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 UBASH3BQ8TF42 649 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms