RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	TYW3	Q6IPR3	259 aa	Known RBP	4.37	□□□□□ -1.71
SEC13-219	ENST00000492602	REEP3	Q6NUK4	255 aa		4.37	□□□□□ -1.71
SEC13-219	ENST00000492602	ULK3	Q6PHR2	472 aa		4.37	□□□□□ -1.71
SEC13-219	ENST00000492602	LYPD2	Q6UXB3	125 aa		4.37	□□□□□ -1.71
SEC13-219	ENST00000492602	H1FNT	Q75WM6	255 aa	Predicted RBP	4.37	□□□□□ -1.71
SEC13-219	ENST00000492602	HDDC2	Q7Z4H3	204 aa		4.37	□□□□□ -1.71
SEC13-219	ENST00000492602	VMO1	Q7Z5L0	202 aa		4.37	□□□□□ -1.71
SEC13-219	ENST00000492602	VRK2	Q86Y07	508 aa		4.37	□□□□□ -1.71
SEC13-219	ENST00000492602	SLC30A8	Q8IWU4	369 aa		4.37	□□□□□ -1.71
SEC13-219	ENST00000492602	RPP25L	Q8N5L8	163 aa	Known RBP	4.37	□□□□□ -1.71
SEC13-219	ENST00000492602	PNLDC1	Q8NA58	520 aa	Known RBP	4.37	□□□□□ -1.71
SEC13-219	ENST00000492602	PIK3C3	Q8NEB9	887 aa		4.37	□□□□□ -1.71
SEC13-219	ENST00000492602	OR5AU1	Q8NGC0	362 aa		4.37	□□□□□ -1.71
SEC13-219	ENST00000492602	MFSD8	Q8NHS3	518 aa		4.37	□□□□□ -1.71
SEC13-219	ENST00000492602	BBS10	Q8TAM1	723 aa		4.37	□□□□□ -1.71
SEC13-219	ENST00000492602	SLC7A13	Q8TCU3	470 aa		4.37	□□□□□ -1.71
SEC13-219	ENST00000492602	NPRL2	Q8WTW4	380 aa		4.37	□□□□□ -1.71
SEC13-219	ENST00000492602	C10orf82	Q8WW14	230 aa		4.37	□□□□□ -1.71
SEC13-219	ENST00000492602	RASSF5	Q8WWW0	418 aa		4.37	□□□□□ -1.71
SEC13-219	ENST00000492602	CNOT9	Q92600	299 aa	Known RBP	4.37	□□□□□ -1.71
SEC13-219	ENST00000492602	SLC38A4	Q969I6	547 aa		4.37	□□□□□ -1.71
SEC13-219	ENST00000492602	OXGR1	Q96P68	337 aa		4.37	□□□□□ -1.71
SEC13-219	ENST00000492602	SSX3	Q99909	188 aa		4.37	□□□□□ -1.71
SEC13-219	ENST00000492602	SH3GL1	Q99961	368 aa		4.37	□□□□□ -1.71
SEC13-219	ENST00000492602	SPATA9	Q9BWV2	254 aa		4.37	□□□□□ -1.71
SEC13-219	ENST00000492602	WNT10A	Q9GZT5	417 aa		4.37	□□□□□ -1.71
SEC13-219	ENST00000492602	FAM234A	Q9H0X4	552 aa		4.37	□□□□□ -1.71
SEC13-219	ENST00000492602	MUC13	Q9H3R2	512 aa		4.37	□□□□□ -1.71
SEC13-219	ENST00000492602	ZNF702P	Q9H963	129 aa		4.37	□□□□□ -1.71
SEC13-219	ENST00000492602	TPT1P8	Q9HAU6	139 aa		4.37	□□□□□ -1.71
SEC13-219	ENST00000492602	PNPO	Q9NVS9	261 aa		4.37	□□□□□ -1.71
SEC13-219	ENST00000492602	ARGLU1	Q9NWB6	273 aa	Predicted RBP	4.37	□□□□□ -1.71
SEC13-219	ENST00000492602	OSGIN1	Q9UJX0	560 aa		4.37	□□□□□ -1.71
SEC13-219	ENST00000492602	TSSC4	Q9Y5U2	329 aa	Predicted RBP	4.37	□□□□□ -1.71
SEC13-219	ENST00000492602	TRAV36DV7	A0A075B6V5	113 aa		4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	TMEM120B	A0PK00	339 aa		4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	MEIOC	A2RUB1	952 aa		4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	CDHR4	A6H8M9	788 aa		4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	FBP2	O00757	339 aa		4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	NPFF	O15130	113 aa		4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	FARS2	O95363	451 aa	Known RBP	4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	BCHE	P06276	602 aa		4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	NR2C1	P13056	603 aa		4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	ETS2	P15036	469 aa		4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	CCNO	P22674	350 aa		4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	AHCY	P23526	432 aa		4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	MAGOH	P61326	146 aa	Known RBP	4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	PLP2	Q04941	152 aa		4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	EPS8	Q12929	822 aa		4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	ZNF404	Q494X3	552 aa		4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	MRPL2	Q5T653	305 aa	Known RBP	4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	INTS11	Q5TA45	600 aa	Known RBP	4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	CARD17	Q5XLA6	110 aa		4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	FAM91A1	Q658Y4	838 aa		4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	ZNF841	Q6ZN19	808 aa		4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	DPPA2	Q7Z7J5	298 aa		4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	UEVLD	Q8IX04	471 aa		4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	SKA3	Q8IX90	412 aa		4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	ANKFN1	Q8N957	763 aa		4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	OR2Z1	Q8NG97	314 aa		4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	OR1J2	Q8NGS2	313 aa		4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	OR6N1	Q8NGY5	312 aa		4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	ZNF420	Q8TAQ5	688 aa	Predicted RBP	4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	FGFBP3	Q8TAT2	258 aa		4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	SLC25A40	Q8TBP6	338 aa		4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	PNPT1	Q8TCS8	783 aa	Known RBP	4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	SLC38A5	Q8WUX1	472 aa		4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	ITLN1	Q8WWA0	313 aa		4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	FOXB1	Q99853	325 aa		4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	NDEL1	Q9GZM8	345 aa		4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	C12orf10	Q9HB07	376 aa		4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	A4GALT	Q9NPC4	353 aa		4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	NANS	Q9NR45	359 aa		4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	AIG1	Q9NVV5	245 aa		4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	STX18	Q9P2W9	335 aa	Known RBP	4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	DNAJB11	Q9UBS4	358 aa		4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	CGGBP1	Q9UFW8	167 aa	Predicted RBP	4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	HAO1	Q9UJM8	370 aa		4.36	□□□□□ -1.71
SEC13-219	ENST00000492602	TRBV23-1	A0A0A0MS06	115 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	LOC102725191	A0A1B0GVB3	256 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	ANGPT2	O15123	496 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	SYNGR1	O43759	233 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	CHST1	O43916	411 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	TIMM8A	O60220	97 aa	Predicted RBP	4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	GMNN	O75496	209 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	LY86	O95711	162 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	SNAP29	O95721	258 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	IGF2	P01344	180 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	FRMD6-AS1	P0C7T7	363 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	GKN3P	P0CG01	181 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	ETFA	P13804	333 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	PRKAR1B	P31321	381 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	SAA4	P35542	130 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	RPS5	P46782	204 aa	Known RBP	4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	NPY4R	P50391	375 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	CDK6	Q00534	326 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	BNIP2	Q12982	314 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	CYLC2	Q14093	348 aa	Predicted RBP	4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	RGN	Q15493	299 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	MAPK11	Q15759	364 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms