RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 EXD2Q9NVH0 621 aa11.48□□□□□ -0.57
HDAC3-213ENST00000492506 SDHAF2Q9NX18 166 aa11.48□□□□□ -0.57
HDAC3-213ENST00000492506 SCP2D1Q9UJQ7 156 aa11.48□□□□□ -0.57
HDAC3-213ENST00000492506 ZNF724A8MTY0 619 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 A8MXK9 166 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 NPIPB8E9PQR5 432 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 H7C2Y5 167 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 PLA2G10O15496 165 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 TSC22D2O75157 780 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 PEX14O75381 377 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 RAD51DO75771 328 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 S100A8P05109 93 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 H2AFB1P0C5Y9 115 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 H2AFB2P0C5Z0 115 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 ACSM4P0C7M7 580 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 FAM157BP0CG42 384 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 SMIM6P0DI80 62 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 HPGDP15428 266 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 MEOX2P50222 304 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 MAP2K6P52564 334 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 PRKAG1P54619 331 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 MTPNP58546 118 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 ZNF91Q05481 1191 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 GGTLC2Q14390 218 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 TSTQ16762 297 aaKnown RBP11.47□□□□□ -0.57
HDAC3-213ENST00000492506 MST1LQ2TV78 715 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 KLHL26Q53HC5 615 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 ZNF385BQ569K4 471 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 SLC25A53Q5H9E4 307 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 LIPNQ5VXI9 398 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 NOXRED1Q6NXP6 359 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 IKBIPQ70UQ0 350 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 TMEM179BQ7Z7N9 219 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 STPG2Q8N412 459 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 UXS1Q8NBZ7 420 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 ATP6V1C2Q8NEY4 427 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 OR52N5Q8NH56 324 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 GPR119Q8TDV5 335 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 FAM120BQ96EK7 910 aaKnown RBP11.47□□□□□ -0.57
HDAC3-213ENST00000492506 OTUB1Q96FW1 271 aaPredicted RBP11.47□□□□□ -0.57
HDAC3-213ENST00000492506 MS4A4EQ96PG1 132 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 INPP5KQ9BT40 448 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 THUMPD3Q9BV44 507 aaKnown RBP11.47□□□□□ -0.57
HDAC3-213ENST00000492506 PRRG3Q9BZD7 231 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 TUBB1Q9H4B7 451 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 ISYNA1Q9NPH2 558 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 PDP1Q9P0J1 537 aaPredicted RBP11.47□□□□□ -0.57
HDAC3-213ENST00000492506 CYB5R1Q9UHQ9 305 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 TGP01266 2768 aa11.47□□□□□ -0.57
HDAC3-213ENST00000492506 A0A096LPI6 279 aa11.46□□□□□ -0.57
HDAC3-213ENST00000492506 A0A0A6YYJ9 748 aa11.46□□□□□ -0.57
HDAC3-213ENST00000492506 IGHV4-61A0A0C4DH41 118 aa11.46□□□□□ -0.57
HDAC3-213ENST00000492506 A0A1W2PR80 420 aa11.46□□□□□ -0.57
HDAC3-213ENST00000492506 IRGMA1A4Y4 181 aa11.46□□□□□ -0.57
HDAC3-213ENST00000492506 ETV2O00321 342 aaPredicted RBP11.46□□□□□ -0.57
HDAC3-213ENST00000492506 FABP7O15540 132 aa11.46□□□□□ -0.57
HDAC3-213ENST00000492506 CHP2O43745 196 aa11.46□□□□□ -0.57
HDAC3-213ENST00000492506 PRKYO43930 277 aa11.46□□□□□ -0.57
HDAC3-213ENST00000492506 MITFO75030 526 aaPredicted RBP11.46□□□□□ -0.57
HDAC3-213ENST00000492506 LINC00032P0C843 101 aa11.46□□□□□ -0.57
HDAC3-213ENST00000492506 CFPP27918 469 aa11.46□□□□□ -0.57
HDAC3-213ENST00000492506 NTF4P34130 210 aa11.46□□□□□ -0.57
HDAC3-213ENST00000492506 GRK5P34947 590 aa11.46□□□□□ -0.57
HDAC3-213ENST00000492506 GPC1P35052 558 aa11.46□□□□□ -0.57
HDAC3-213ENST00000492506 FRKP42685 505 aaPredicted RBP11.46□□□□□ -0.57
HDAC3-213ENST00000492506 RNF144AP50876 292 aaPredicted RBP11.46□□□□□ -0.57
HDAC3-213ENST00000492506 P2RX1P51575 399 aa11.46□□□□□ -0.57
HDAC3-213ENST00000492506 SUMO3P55854 103 aaPredicted RBP11.46□□□□□ -0.57
HDAC3-213ENST00000492506 MLLT11Q13015 90 aaPredicted RBP11.46□□□□□ -0.57
HDAC3-213ENST00000492506 KIAA0040Q15053 153 aa11.46□□□□□ -0.57
HDAC3-213ENST00000492506 C6orf136Q5SQH8 315 aa11.46□□□□□ -0.57
HDAC3-213ENST00000492506 UTS2BQ765I0 119 aa11.46□□□□□ -0.57
HDAC3-213ENST00000492506 TRIM46Q7Z4K8 759 aa11.46□□□□□ -0.57
HDAC3-213ENST00000492506 GALNT5Q7Z7M9 940 aa11.46□□□□□ -0.57
HDAC3-213ENST00000492506 HS3ST5Q8IZT8 346 aa11.46□□□□□ -0.57
HDAC3-213ENST00000492506 LILRB2Q8N423 598 aa11.46□□□□□ -0.57
HDAC3-213ENST00000492506 OR4D10Q8NGI6 311 aa11.46□□□□□ -0.57
HDAC3-213ENST00000492506 OR2T11Q8NH01 316 aa11.46□□□□□ -0.57
HDAC3-213ENST00000492506 PHOSPHO1Q8TCT1 267 aa11.46□□□□□ -0.57
HDAC3-213ENST00000492506 ZNF764Q96H86 408 aaPredicted RBP11.46□□□□□ -0.57
HDAC3-213ENST00000492506 MRGPRX4Q96LA9 322 aa11.46□□□□□ -0.57
HDAC3-213ENST00000492506 C7orf50Q9BRJ6 194 aaKnown RBP11.46□□□□□ -0.57
HDAC3-213ENST00000492506 TCEAL7Q9BRU2 100 aa11.46□□□□□ -0.57
HDAC3-213ENST00000492506 SOX7Q9BT81 388 aa11.46□□□□□ -0.57
HDAC3-213ENST00000492506 TMEM43Q9BTV4 400 aa11.46□□□□□ -0.57
HDAC3-213ENST00000492506 CLN6Q9NWW5 311 aa11.46□□□□□ -0.57
HDAC3-213ENST00000492506 IMPAD1Q9NX62 359 aa11.46□□□□□ -0.57
HDAC3-213ENST00000492506 PPP1R14DQ9NXH3 145 aa11.46□□□□□ -0.57
HDAC3-213ENST00000492506 REV1Q9UBZ9 1251 aa11.46□□□□□ -0.57
HDAC3-213ENST00000492506 MRPS7Q9Y2R9 242 aaKnown RBP11.46□□□□□ -0.57
HDAC3-213ENST00000492506 SAMHD1Q9Y3Z3 626 aaKnown RBP11.46□□□□□ -0.57
HDAC3-213ENST00000492506 CCL27Q9Y4X3 112 aa11.46□□□□□ -0.57
HDAC3-213ENST00000492506 NUBP2Q9Y5Y2 271 aa11.46□□□□□ -0.57
HDAC3-213ENST00000492506 CDH10Q9Y6N8 788 aa11.46□□□□□ -0.57
HDAC3-213ENST00000492506 IGKV3D-15A0A087WSY6 115 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 TMEM82A0PJX8 343 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 M0R233 179 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 AIPO00170 330 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 NDUFS8O00217 210 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 WRBO00258 174 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms