RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 OR1J2Q8NGS2 313 aa9.52□□□□□ -0.89
TMEM39A-211ENST00000491685 OR4Q3Q8NH05 313 aa9.52□□□□□ -0.89
TMEM39A-211ENST00000491685 TRUB1Q8WWH5 349 aaKnown RBP9.52□□□□□ -0.89
TMEM39A-211ENST00000491685 PLA2G12AQ9BZM1 189 aa9.52□□□□□ -0.89
TMEM39A-211ENST00000491685 FN3KQ9H479 309 aa9.52□□□□□ -0.89
TMEM39A-211ENST00000491685 RIBC2Q9H4K1 309 aa9.52□□□□□ -0.89
TMEM39A-211ENST00000491685 RPRD1BQ9NQG5 326 aaKnown RBP9.52□□□□□ -0.89
TMEM39A-211ENST00000491685 CMC2Q9NRP2 79 aa9.52□□□□□ -0.89
TMEM39A-211ENST00000491685 CA10Q9NS85 328 aa9.52□□□□□ -0.89
TMEM39A-211ENST00000491685 CRNNQ9UBG3 495 aaPredicted RBP9.52□□□□□ -0.89
TMEM39A-211ENST00000491685 RAB26Q9ULW5 256 aa9.52□□□□□ -0.89
TMEM39A-211ENST00000491685 COA3Q9Y2R0 106 aaPredicted RBP9.52□□□□□ -0.89
TMEM39A-211ENST00000491685 SPEF1Q9Y4P9 236 aa9.52□□□□□ -0.89
TMEM39A-211ENST00000491685 LRRC42Q9Y546 428 aa9.52□□□□□ -0.89
TMEM39A-211ENST00000491685 TIMM10BQ9Y5J6 103 aa9.52□□□□□ -0.89
TMEM39A-211ENST00000491685 HSPE1-MOB4S4R3N1 261 aa9.52□□□□□ -0.89
TMEM39A-211ENST00000491685 SVEP1Q4LDE5 3571 aa9.52□□□□□ -0.89
TMEM39A-211ENST00000491685 IGHV4-61A0A0C4DH41 118 aa9.51□□□□□ -0.89
TMEM39A-211ENST00000491685 EI24O14681 340 aa9.51□□□□□ -0.89
TMEM39A-211ENST00000491685 PHF1O43189 567 aaPredicted RBP9.51□□□□□ -0.89
TMEM39A-211ENST00000491685 MPZL2O60487 215 aa9.51□□□□□ -0.89
TMEM39A-211ENST00000491685 SLC2A10O95528 541 aa9.51□□□□□ -0.89
TMEM39A-211ENST00000491685 IGFBP1P08833 259 aaPredicted RBP9.51□□□□□ -0.89
TMEM39A-211ENST00000491685 HSF2Q03933 536 aa9.51□□□□□ -0.89
TMEM39A-211ENST00000491685 HGFACQ04756 655 aa9.51□□□□□ -0.89
TMEM39A-211ENST00000491685 PIGFQ07326 219 aa9.51□□□□□ -0.89
TMEM39A-211ENST00000491685 GGTLC2Q14390 218 aa9.51□□□□□ -0.89
TMEM39A-211ENST00000491685 LRRC36Q1X8D7 754 aa9.51□□□□□ -0.89
TMEM39A-211ENST00000491685 TMEM236Q5W0B7 351 aa9.51□□□□□ -0.89
TMEM39A-211ENST00000491685 SKA3Q8IX90 412 aa9.51□□□□□ -0.89
TMEM39A-211ENST00000491685 OR6V1Q8N148 313 aa9.51□□□□□ -0.89
TMEM39A-211ENST00000491685 LRRC18Q8N456 261 aa9.51□□□□□ -0.89
TMEM39A-211ENST00000491685 GALNT4Q8N4A0 578 aa9.51□□□□□ -0.89
TMEM39A-211ENST00000491685 PROKR2Q8NFJ6 384 aa9.51□□□□□ -0.89
TMEM39A-211ENST00000491685 OR8D4Q8NGM9 314 aa9.51□□□□□ -0.89
TMEM39A-211ENST00000491685 OR2AJ1Q8NGZ0 328 aa9.51□□□□□ -0.89
TMEM39A-211ENST00000491685 PIMREGQ9BSJ6 248 aa9.51□□□□□ -0.89
TMEM39A-211ENST00000491685 SOX7Q9BT81 388 aa9.51□□□□□ -0.89
TMEM39A-211ENST00000491685 RACGAP1Q9H0H5 632 aa9.51□□□□□ -0.89
TMEM39A-211ENST00000491685 C1orf198Q9H425 327 aa9.51□□□□□ -0.89
TMEM39A-211ENST00000491685 NOX3Q9HBY0 568 aa9.51□□□□□ -0.89
TMEM39A-211ENST00000491685 TMEM160Q9NX00 188 aa9.51□□□□□ -0.89
TMEM39A-211ENST00000491685 IMPAD1Q9NX62 359 aa9.51□□□□□ -0.89
TMEM39A-211ENST00000491685 SMPD3Q9NY59 655 aaPredicted RBP9.51□□□□□ -0.89
TMEM39A-211ENST00000491685 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.51□□□□□ -0.898e-8■■■■■ 33.5
TMEM39A-211ENST00000491685 OR6C68A6NDL8 312 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 ZAR1LA6NP61 321 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 B9A039 149 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 H7C1C5 153 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 SURF4O15260 269 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 SLC16A6O15403 523 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 MITFO75030 526 aaPredicted RBP9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 IGKV3-15P01624 115 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 CST2P09228 141 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 OR4A8P0C604 315 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 FAM157CP0CG43 387 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 B4GALT1P15291 398 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 HNF1AP20823 631 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 USF1P22415 310 aaPredicted RBP9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 PEX2P28328 305 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 SERPINF1P36955 418 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 NR4A2P43354 598 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 GZMKP49863 264 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 PDLIM4P50479 330 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 IDH3GP51553 393 aaPredicted RBP9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 LCN6P62502 163 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 TEKQ02763 1124 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 SCRN3Q0VDG4 424 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 CARTPTQ16568 116 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 MSMPQ1L6U9 139 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 ZIK1Q3SY52 487 aaPredicted RBP9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 SLC35D3Q5M8T2 416 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 ZNF362Q5T0B9 420 aaPredicted RBP9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 SLX4IPQ5VYV7 408 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 ARL9Q6T311 187 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 UGT2A3Q6UWM9 527 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 PTCHD4Q6ZW05 846 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 ZBTB46Q86UZ6 589 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 CPOQ8IVL8 374 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 ZCCHC24Q8N2G6 241 aaKnown RBP9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 CYB561A3Q8NBI2 242 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 PTP4A1Q93096 173 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 NMD3Q96D46 503 aaKnown RBP9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 Q96MT0 163 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 SLC29A1Q99808 456 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 SH3GL3Q99963 347 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 APOL4Q9BPW4 351 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 GABARAPL3Q9BY60 117 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 RAB1BQ9H0U4 201 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 OR51V1Q9H2C8 321 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 PLK3Q9H4B4 646 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 CHODLQ9H9P2 273 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 EIF3KQ9UBQ5 218 aaKnown RBP9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 TMEFF2Q9UIK5 374 aaPredicted RBP9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 KCNG2Q9UJ96 466 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 POLR1DQ9Y2S0 133 aa9.5□□□□□ -0.89
TMEM39A-211ENST00000491685 LOC100130705A0A1B0GUX0 176 aa9.49□□□□□ -0.89
TMEM39A-211ENST00000491685 DENRO43583 198 aaKnown RBP9.49□□□□□ -0.89
TMEM39A-211ENST00000491685 HLA-HP01893 362 aa9.49□□□□□ -0.89
TMEM39A-211ENST00000491685 CTLA4P16410 223 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms