RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 FRRS1LQ9P0K9 344 aa11.63□□□□□ -0.55
SHOX2-205ENST00000490689 SERGEFQ9UGK8 458 aa11.63□□□□□ -0.55
SHOX2-205ENST00000490689 UTRNP46939 3433 aa11.63□□□□□ -0.55
SHOX2-205ENST00000490689 C4orf47A7E2U8 309 aa11.63□□□□□ -0.55
SHOX2-205ENST00000490689 UTS2O95399 124 aa11.63□□□□□ -0.55
SHOX2-205ENST00000490689 RPA2P15927 270 aa11.63□□□□□ -0.55
SHOX2-205ENST00000490689 NAGAP17050 411 aa11.63□□□□□ -0.55
SHOX2-205ENST00000490689 THBS2P35442 1172 aa11.63□□□□□ -0.55
SHOX2-205ENST00000490689 DHPSP49366 369 aaPredicted RBP11.63□□□□□ -0.55
SHOX2-205ENST00000490689 ZNF41P51814 821 aaPredicted RBP11.63□□□□□ -0.55
SHOX2-205ENST00000490689 RAB38P57729 211 aa11.63□□□□□ -0.55
SHOX2-205ENST00000490689 UBE2KP61086 200 aa11.63□□□□□ -0.55
SHOX2-205ENST00000490689 EEF1A1P5Q5VTE0 462 aa11.63□□□□□ -0.55
SHOX2-205ENST00000490689 PDE7BQ9NP56 450 aa11.63□□□□□ -0.55
SHOX2-205ENST00000490689 EXOSC3Q9NQT5 275 aaKnown RBP11.63□□□□□ -0.55
SHOX2-205ENST00000490689 B9D1Q9UPM9 204 aa11.63□□□□□ -0.55
SHOX2-205ENST00000490689 MYLKQ15746 1914 aa11.63□□□□□ -0.55
SHOX2-205ENST00000490689 CHD5Q8TDI0 1954 aa11.63□□□□□ -0.55
SHOX2-205ENST00000490689 GNRH1P01148 92 aa11.63□□□□□ -0.55
SHOX2-205ENST00000490689 SFTA3P0C7M3 94 aa11.63□□□□□ -0.55
SHOX2-205ENST00000490689 ALDH3B1P43353 468 aa11.63□□□□□ -0.55
SHOX2-205ENST00000490689 SSX9Q7RTT3 188 aa11.63□□□□□ -0.55
SHOX2-205ENST00000490689 VN1R4Q7Z5H5 301 aa11.63□□□□□ -0.55
SHOX2-205ENST00000490689 C16orf52Q8NHV5 167 aa11.63□□□□□ -0.55
SHOX2-205ENST00000490689 SFT2D1Q8WV19 159 aa11.63□□□□□ -0.55
SHOX2-205ENST00000490689 ZNF707Q96C28 371 aaPredicted RBP11.63□□□□□ -0.55
SHOX2-205ENST00000490689 ZNF442Q9H7R0 627 aa11.63□□□□□ -0.55
SHOX2-205ENST00000490689 MRM2Q9UI43 246 aaKnown RBP11.63□□□□□ -0.55
SHOX2-205ENST00000490689 RAB22AQ9UL26 194 aa11.63□□□□□ -0.55
SHOX2-205ENST00000490689 CTDSPLO15194 276 aa11.62□□□□□ -0.55
SHOX2-205ENST00000490689 SEC14L5O43304 696 aa11.62□□□□□ -0.55
SHOX2-205ENST00000490689 ADAP1O75689 374 aa11.62□□□□□ -0.55
SHOX2-205ENST00000490689 WNT11O96014 354 aa11.62□□□□□ -0.55
SHOX2-205ENST00000490689 CEACAM5P06731 702 aa11.62□□□□□ -0.55
SHOX2-205ENST00000490689 TANGO2Q6ICL3 276 aa11.62□□□□□ -0.55
SHOX2-205ENST00000490689 FAM199XQ6PEV8 388 aaPredicted RBP11.62□□□□□ -0.55
SHOX2-205ENST00000490689 FAM57BQ71RH2 274 aa11.62□□□□□ -0.55
SHOX2-205ENST00000490689 OVCH2Q7RTZ1 564 aa11.62□□□□□ -0.55
SHOX2-205ENST00000490689 CPEB2Q7Z5Q1 589 aaKnown RBP11.62□□□□□ -0.55
SHOX2-205ENST00000490689 MOGAT1Q96PD6 335 aa11.62□□□□□ -0.55
SHOX2-205ENST00000490689 PRSS27Q9BQR3 290 aa11.62□□□□□ -0.55
SHOX2-205ENST00000490689 KCNMB2Q9Y691 235 aa11.62□□□□□ -0.55
SHOX2-205ENST00000490689 A0A1W2PPV9 198 aa11.62□□□□□ -0.55
SHOX2-205ENST00000490689 RNASEK-C17orf49H0YIS7 233 aa11.62□□□□□ -0.55
SHOX2-205ENST00000490689 CD96P40200 585 aa11.62□□□□□ -0.55
SHOX2-205ENST00000490689 SLC17A1Q14916 467 aa11.62□□□□□ -0.55
SHOX2-205ENST00000490689 FCRL6Q6DN72 434 aa11.62□□□□□ -0.55
SHOX2-205ENST00000490689 OR1S1Q8NH92 325 aa11.62□□□□□ -0.55
SHOX2-205ENST00000490689 APOBEC4Q8WW27 367 aaKnown RBP11.62□□□□□ -0.55
SHOX2-205ENST00000490689 MRPS24Q96EL2 167 aaKnown RBP11.62□□□□□ -0.55
SHOX2-205ENST00000490689 LPAR4Q99677 370 aa11.62□□□□□ -0.55
SHOX2-205ENST00000490689 ZMAT5Q9UDW3 170 aaKnown RBP11.62□□□□□ -0.55
SHOX2-205ENST00000490689 UNC13CQ8NB66 2214 aa11.62□□□□□ -0.55
SHOX2-205ENST00000490689 TMEM272A0A1B0GTI8 110 aa11.62□□□□□ -0.55
SHOX2-205ENST00000490689 VSTM2BA6NLU5 285 aa11.62□□□□□ -0.55
SHOX2-205ENST00000490689 PPIAP62937 165 aaKnown RBP11.62□□□□□ -0.55
SHOX2-205ENST00000490689 C2orf68Q2NKX9 166 aa11.62□□□□□ -0.55
SHOX2-205ENST00000490689 RASGRP3Q8IV61 690 aa11.62□□□□□ -0.55
SHOX2-205ENST00000490689 BCORP1Q8N888 145 aa11.62□□□□□ -0.55
SHOX2-205ENST00000490689 ZNF296Q8WUU4 475 aaPredicted RBP11.62□□□□□ -0.55
SHOX2-205ENST00000490689 DAZLQ92904 295 aaKnown RBP11.62□□□□□ -0.55
SHOX2-205ENST00000490689 ZNF775Q96BV0 537 aaPredicted RBP11.62□□□□□ -0.55
SHOX2-205ENST00000490689 KTI12Q96EK9 354 aaPredicted RBP11.62□□□□□ -0.55
SHOX2-205ENST00000490689 GAS2L1Q99501 681 aaPredicted RBP11.62□□□□□ -0.55
SHOX2-205ENST00000490689 SLC19A3Q9BZV2 496 aa11.62□□□□□ -0.55
SHOX2-205ENST00000490689 HEXA-AS1Q9H8Q6 139 aa11.62□□□□□ -0.55
SHOX2-205ENST00000490689 TMED7Q9Y3B3 224 aa11.62□□□□□ -0.55
SHOX2-205ENST00000490689 DICER1Q9UPY3 1922 aaKnown RBP11.61□□□□□ -0.55
SHOX2-205ENST00000490689 PIN1P1O15428 100 aa11.61□□□□□ -0.55
SHOX2-205ENST00000490689 SLC34A2O95436 690 aa11.61□□□□□ -0.55
SHOX2-205ENST00000490689 DPP4P27487 766 aa11.61□□□□□ -0.55
SHOX2-205ENST00000490689 HSD11B2P80365 405 aa11.61□□□□□ -0.55
SHOX2-205ENST00000490689 ATPAF1Q5TC12 328 aaPredicted RBP11.61□□□□□ -0.55
SHOX2-205ENST00000490689 SLC22A24Q8N4F4 322 aa11.61□□□□□ -0.55
SHOX2-205ENST00000490689 SOSTQ9BQB4 213 aa11.61□□□□□ -0.55
SHOX2-205ENST00000490689 HDAC8Q9BY41 377 aa11.61□□□□□ -0.55
SHOX2-205ENST00000490689 A0A0G2JMZ2 1700 aa11.61□□□□□ -0.55
SHOX2-205ENST00000490689 LRRC37A2A6NM11 1700 aa11.61□□□□□ -0.55
SHOX2-205ENST00000490689 FAM230AA0A1W2PPH8 454 aa11.61□□□□□ -0.55
SHOX2-205ENST00000490689 UMAD1C9J7I0 102 aa11.61□□□□□ -0.55
SHOX2-205ENST00000490689 NXPH3O95157 252 aa11.61□□□□□ -0.55
SHOX2-205ENST00000490689 RAB5CP51148 216 aa11.61□□□□□ -0.55
SHOX2-205ENST00000490689 RPS15P62841 145 aaKnown RBP11.61□□□□□ -0.55
SHOX2-205ENST00000490689 RSU1Q15404 277 aa11.61□□□□□ -0.55
SHOX2-205ENST00000490689 ELAVL1Q15717 326 aaKnown RBP11.61□□□□□ -0.55
SHOX2-205ENST00000490689 PHLDA2Q53GA4 152 aa11.61□□□□□ -0.55
SHOX2-205ENST00000490689 ARTNQ5T4W7 220 aa11.61□□□□□ -0.55
SHOX2-205ENST00000490689 FAM24BQ8N5W8 94 aa11.61□□□□□ -0.55
SHOX2-205ENST00000490689 LRFN1Q9P244 771 aa11.61□□□□□ -0.55
SHOX2-205ENST00000490689 MMP24Q9Y5R2 645 aa11.61□□□□□ -0.55
SHOX2-205ENST00000490689 METTL12A8MUP2 240 aa11.61□□□□□ -0.55
SHOX2-205ENST00000490689 OR2T1O43869 369 aa11.61□□□□□ -0.55
SHOX2-205ENST00000490689 GREM1O60565 184 aa11.61□□□□□ -0.55
SHOX2-205ENST00000490689 DIRAS3O95661 229 aa11.61□□□□□ -0.55
SHOX2-205ENST00000490689 EPHA1P21709 976 aa11.61□□□□□ -0.55
SHOX2-205ENST00000490689 HNRNPA2B1P22626 353 aaKnown RBP11.61□□□□□ -0.55
SHOX2-205ENST00000490689 CHATP28329 748 aa11.61□□□□□ -0.55
SHOX2-205ENST00000490689 FCGR2CP31995 323 aa11.61□□□□□ -0.55
SHOX2-205ENST00000490689 TCTN1Q2MV58 587 aa11.61□□□□□ -0.55
SHOX2-205ENST00000490689 GPR119Q8TDV5 335 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms