RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 C17orf100A8MU93 164 aa15.47■□□□□ 0.07
COL9A3-214ENST00000490398 RENP00797 406 aa15.47■□□□□ 0.07
COL9A3-214ENST00000490398 CST1P01037 141 aa15.47■□□□□ 0.07
COL9A3-214ENST00000490398 IGHV3-13P01766 116 aa15.47■□□□□ 0.07
COL9A3-214ENST00000490398 COX5BP10606 129 aa15.47■□□□□ 0.07
COL9A3-214ENST00000490398 GIFP27352 417 aa15.47■□□□□ 0.07
COL9A3-214ENST00000490398 NOS3P29474 1203 aa15.47■□□□□ 0.07
COL9A3-214ENST00000490398 CRABP1P29762 137 aa15.47■□□□□ 0.07
COL9A3-214ENST00000490398 IL2RGP31785 369 aa15.47■□□□□ 0.07
COL9A3-214ENST00000490398 PYCR1P32322 319 aa15.47■□□□□ 0.07
COL9A3-214ENST00000490398 PPP1CBP62140 327 aa15.47■□□□□ 0.07
COL9A3-214ENST00000490398 RIN1Q13671 783 aa15.47■□□□□ 0.07
COL9A3-214ENST00000490398 RSPO1Q2MKA7 263 aaPredicted RBP15.47■□□□□ 0.07
COL9A3-214ENST00000490398 SPATA24Q86W54 205 aa15.47■□□□□ 0.07
COL9A3-214ENST00000490398 LINC00346Q8IVM7 164 aa15.47■□□□□ 0.07
COL9A3-214ENST00000490398 LINC00471Q8N535 108 aa15.47■□□□□ 0.07
COL9A3-214ENST00000490398 SLC37A3Q8NCC5 494 aa15.47■□□□□ 0.07
COL9A3-214ENST00000490398 DGCR6LQ9BY27 220 aa15.47■□□□□ 0.07
COL9A3-214ENST00000490398 RACGAP1Q9H0H5 632 aa15.47■□□□□ 0.07
COL9A3-214ENST00000490398 MYOZ1Q9NP98 299 aaPredicted RBP15.47■□□□□ 0.07
COL9A3-214ENST00000490398 HINT3Q9NQE9 182 aaKnown RBP15.47■□□□□ 0.07
COL9A3-214ENST00000490398 TBC1D23Q9NUY8 699 aa15.47■□□□□ 0.07
COL9A3-214ENST00000490398 MRPL22Q9NWU5 206 aaKnown RBP15.47■□□□□ 0.07
COL9A3-214ENST00000490398 EIF3KQ9UBQ5 218 aaKnown RBP15.47■□□□□ 0.07
COL9A3-214ENST00000490398 NDRG4Q9ULP0 352 aaKnown RBP15.47■□□□□ 0.07
COL9A3-214ENST00000490398 STARD10Q9Y365 291 aa15.47■□□□□ 0.07
COL9A3-214ENST00000490398 TCRBV3S1A0A5B6 114 aa15.46■□□□□ 0.07
COL9A3-214ENST00000490398 IDH3BO43837 385 aa15.46■□□□□ 0.07
COL9A3-214ENST00000490398 LILRA1O75019 489 aa15.46■□□□□ 0.07
COL9A3-214ENST00000490398 ZNF16P17020 682 aaPredicted RBP15.46■□□□□ 0.07
COL9A3-214ENST00000490398 RBMXP38159 391 aaKnown RBP15.46■□□□□ 0.07
COL9A3-214ENST00000490398 RPS27P42677 84 aaKnown RBP15.46■□□□□ 0.07
COL9A3-214ENST00000490398 MMP15P51511 669 aa15.46■□□□□ 0.07
COL9A3-214ENST00000490398 CCL8P80075 99 aa15.46■□□□□ 0.07
COL9A3-214ENST00000490398 FLOT2Q14254 428 aa15.46■□□□□ 0.07
COL9A3-214ENST00000490398 ZNF718Q3SXZ3 478 aa15.46■□□□□ 0.07
COL9A3-214ENST00000490398 SPRNQ5BIV9 151 aa15.46■□□□□ 0.07
COL9A3-214ENST00000490398 C6orf52Q5T4I8 152 aa15.46■□□□□ 0.07
COL9A3-214ENST00000490398 DNM1P34Q6PK57 102 aa15.46■□□□□ 0.07
COL9A3-214ENST00000490398 CFAP77Q6ZQR2 320 aa15.46■□□□□ 0.07
COL9A3-214ENST00000490398 PRIMA1Q86XR5 153 aa15.46■□□□□ 0.07
COL9A3-214ENST00000490398 OR51L1Q8NGJ5 315 aa15.46■□□□□ 0.07
COL9A3-214ENST00000490398 OR9Q1Q8NGQ5 310 aa15.46■□□□□ 0.07
COL9A3-214ENST00000490398 OR1F12Q8NHA8 337 aa15.46■□□□□ 0.07
COL9A3-214ENST00000490398 FEVQ99581 238 aa15.46■□□□□ 0.07
COL9A3-214ENST00000490398 WACQ9BTA9 647 aa15.46■□□□□ 0.07
COL9A3-214ENST00000490398 GRIP1Q9Y3R0 1128 aa15.46■□□□□ 0.07
COL9A3-214ENST00000490398 JMJD1CQ15652 2540 aa15.46■□□□□ 0.06
COL9A3-214ENST00000490398 CHD3Q12873 2000 aaKnown RBP15.45■□□□□ 0.06
COL9A3-214ENST00000490398 TVP23AA6NH52 213 aa15.45■□□□□ 0.06
COL9A3-214ENST00000490398 ZSCAN5BA6NJL1 495 aa15.45■□□□□ 0.06
COL9A3-214ENST00000490398 WNT9BO14905 357 aa15.45■□□□□ 0.06
COL9A3-214ENST00000490398 ABHD16AO95870 558 aa15.45■□□□□ 0.06
COL9A3-214ENST00000490398 ERCC1P07992 297 aaPredicted RBP15.45■□□□□ 0.06
COL9A3-214ENST00000490398 GGT2P36268 569 aa15.45■□□□□ 0.06
COL9A3-214ENST00000490398 TEKQ02763 1124 aa15.45■□□□□ 0.06
COL9A3-214ENST00000490398 CRMP1Q14194 572 aa15.45■□□□□ 0.06
COL9A3-214ENST00000490398 TSTQ16762 297 aaKnown RBP15.45■□□□□ 0.06
COL9A3-214ENST00000490398 MBNL2Q5VZF2 373 aaKnown RBP15.45■□□□□ 0.06
COL9A3-214ENST00000490398 SLC18B1Q6NT16 456 aa15.45■□□□□ 0.06
COL9A3-214ENST00000490398 LNX2Q8N448 690 aa15.45■□□□□ 0.06
COL9A3-214ENST00000490398 IQCF1Q8N6M8 205 aa15.45■□□□□ 0.06
COL9A3-214ENST00000490398 OR52L1Q8NGH7 329 aa15.45■□□□□ 0.06
COL9A3-214ENST00000490398 GIPC3Q8TF64 312 aa15.45■□□□□ 0.06
COL9A3-214ENST00000490398 SLCO1C1Q9NYB5 712 aa15.45■□□□□ 0.06
COL9A3-214ENST00000490398 POLR1DQ9Y2S0 133 aa15.45■□□□□ 0.06
COL9A3-214ENST00000490398 CACNG2Q9Y698 323 aa15.45■□□□□ 0.06
COL9A3-214ENST00000490398 CDC14BO60729 498 aa15.44■□□□□ 0.06
COL9A3-214ENST00000490398 FKBP6O75344 327 aa15.44■□□□□ 0.06
COL9A3-214ENST00000490398 RP2O75695 350 aa15.44■□□□□ 0.06
COL9A3-214ENST00000490398 GYPBP06028 91 aa15.44■□□□□ 0.06
COL9A3-214ENST00000490398 CLUP10909 449 aa15.44■□□□□ 0.06
COL9A3-214ENST00000490398 ZNF23P17027 643 aa15.44■□□□□ 0.06
COL9A3-214ENST00000490398 PRKACGP22612 351 aa15.44■□□□□ 0.06
COL9A3-214ENST00000490398 GCH1P30793 250 aa15.44■□□□□ 0.06
COL9A3-214ENST00000490398 SELENOVP59797 346 aa15.44■□□□□ 0.06
COL9A3-214ENST00000490398 CBX1P83916 185 aa15.44■□□□□ 0.06
COL9A3-214ENST00000490398 PPP2R2BQ00005 443 aa15.44■□□□□ 0.06
COL9A3-214ENST00000490398 COX10Q12887 443 aa15.44■□□□□ 0.06
COL9A3-214ENST00000490398 PSG7Q13046 419 aa15.44■□□□□ 0.06
COL9A3-214ENST00000490398 RPL13AP3Q6NVV1 102 aa15.44■□□□□ 0.06
COL9A3-214ENST00000490398 TMEM154Q6P9G4 183 aa15.44■□□□□ 0.06
COL9A3-214ENST00000490398 RDH5Q92781 318 aa15.44■□□□□ 0.06
COL9A3-214ENST00000490398 MSI2Q96DH6 328 aaKnown RBP15.44■□□□□ 0.06
COL9A3-214ENST00000490398 RBM4Q9BWF3 364 aaKnown RBP15.44■□□□□ 0.06
COL9A3-214ENST00000490398 PNRC2Q9NPJ4 139 aaKnown RBP15.44■□□□□ 0.06
COL9A3-214ENST00000490398 ZNF275Q9NSD4 429 aaPredicted RBP15.44■□□□□ 0.06
COL9A3-214ENST00000490398 TBCCD1Q9NVR7 557 aa15.44■□□□□ 0.06
COL9A3-214ENST00000490398 PDP1Q9P0J1 537 aaPredicted RBP15.44■□□□□ 0.06
COL9A3-214ENST00000490398 KLHL21Q9UJP4 597 aa15.44■□□□□ 0.06
COL9A3-214ENST00000490398 YLPM1P49750 1951 aaKnown RBP15.44■□□□□ 0.06
COL9A3-214ENST00000490398 SPRY3O43610 288 aa15.43■□□□□ 0.06
COL9A3-214ENST00000490398 TLX2O43763 284 aaPredicted RBP15.43■□□□□ 0.06
COL9A3-214ENST00000490398 IGHV1-46P01743 117 aa15.43■□□□□ 0.06
COL9A3-214ENST00000490398 TACSTD2P09758 323 aa15.43■□□□□ 0.06
COL9A3-214ENST00000490398 ANOS1P23352 680 aa15.43■□□□□ 0.06
COL9A3-214ENST00000490398 KRTAP27-1Q3LI81 207 aa15.43■□□□□ 0.06
COL9A3-214ENST00000490398 SLC36A3Q495N2 470 aa15.43■□□□□ 0.06
COL9A3-214ENST00000490398 CD300LDQ6UXZ3 194 aa15.43■□□□□ 0.06
COL9A3-214ENST00000490398 PAPD5Q8NDF8 572 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms