RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 ZNF835Q9Y2P0 537 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 RFNGQ9Y644 331 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 OR6C74A6NCV1 312 aa2.24□□□□□ -2.05
CD46-216ENST00000490278 SCAMP2O15127 329 aaKnown RBP2.24□□□□□ -2.05
CD46-216ENST00000490278 HUS1O60921 280 aa2.24□□□□□ -2.05
CD46-216ENST00000490278 CDH16O75309 829 aa2.24□□□□□ -2.05
CD46-216ENST00000490278 RDH16O75452 317 aa2.24□□□□□ -2.05
CD46-216ENST00000490278 GCM2O75603 506 aaPredicted RBP2.24□□□□□ -2.05
CD46-216ENST00000490278 OR2F2O95006 317 aa2.24□□□□□ -2.05
CD46-216ENST00000490278 YIF1AO95070 293 aa2.24□□□□□ -2.05
CD46-216ENST00000490278 ARG1P05089 322 aa2.24□□□□□ -2.05
CD46-216ENST00000490278 ZNF286BP0CG31 522 aa2.24□□□□□ -2.05
CD46-216ENST00000490278 RAB3AP20336 220 aa2.24□□□□□ -2.05
CD46-216ENST00000490278 GTF2E2P29084 291 aaKnown RBP2.24□□□□□ -2.05
CD46-216ENST00000490278 MRPL19P49406 292 aaKnown RBP2.24□□□□□ -2.05
CD46-216ENST00000490278 P2RX1P51575 399 aa2.24□□□□□ -2.05
CD46-216ENST00000490278 RPS15P62841 145 aaKnown RBP2.24□□□□□ -2.05
CD46-216ENST00000490278 BEX3Q00994 111 aa2.24□□□□□ -2.05
CD46-216ENST00000490278 LIPEQ05469 1076 aa2.24□□□□□ -2.05
CD46-216ENST00000490278 PSMD5Q16401 504 aa2.24□□□□□ -2.05
CD46-216ENST00000490278 ALKBH6Q3KRA9 238 aa2.24□□□□□ -2.05
CD46-216ENST00000490278 SMUG1Q53HV7 270 aa2.24□□□□□ -2.05
CD46-216ENST00000490278 SPANXN2Q5MJ10 180 aa2.24□□□□□ -2.05
CD46-216ENST00000490278 GPR107Q5VW38 600 aa2.24□□□□□ -2.05
CD46-216ENST00000490278 TTC23LQ6PF05 361 aa2.24□□□□□ -2.05
CD46-216ENST00000490278 TMEM205Q6UW68 189 aa2.24□□□□□ -2.05
CD46-216ENST00000490278 KRTAP5-5Q701N2 237 aaPredicted RBP2.24□□□□□ -2.05
CD46-216ENST00000490278 LGI3Q8N145 548 aa2.24□□□□□ -2.05
CD46-216ENST00000490278 OR8U1Q8NH10 309 aa2.24□□□□□ -2.05
CD46-216ENST00000490278 LYPD6BQ8NI32 183 aa2.24□□□□□ -2.05
CD46-216ENST00000490278 NUBPLQ8TB37 319 aa2.24□□□□□ -2.05
CD46-216ENST00000490278 RGP1Q92546 391 aaPredicted RBP2.24□□□□□ -2.05
CD46-216ENST00000490278 RBMXL1Q96E39 390 aaKnown RBP2.24□□□□□ -2.05
CD46-216ENST00000490278 NARS2Q96I59 477 aaKnown RBP2.24□□□□□ -2.05
CD46-216ENST00000490278 LINC00477Q96M19 166 aa2.24□□□□□ -2.05
CD46-216ENST00000490278 LCE3DQ9BYE3 92 aa2.24□□□□□ -2.05
CD46-216ENST00000490278 RAB20Q9NX57 234 aa2.24□□□□□ -2.05
CD46-216ENST00000490278 MTCH1Q9NZJ7 389 aa2.24□□□□□ -2.05
CD46-216ENST00000490278 SLC17A4Q9Y2C5 497 aa2.24□□□□□ -2.05
CD46-216ENST00000490278 A0A075B6Q4 140 aa2.23□□□□□ -2.05
CD46-216ENST00000490278 IGKV6-21A0A0C4DH24 114 aa2.23□□□□□ -2.05
CD46-216ENST00000490278 A0A0U1RQV1 116 aa2.23□□□□□ -2.05
CD46-216ENST00000490278 SPRR5A0A1B0GTR4 108 aa2.23□□□□□ -2.05
CD46-216ENST00000490278 A0A1W2PQ67 120 aa2.23□□□□□ -2.05
CD46-216ENST00000490278 SGK1O00141 431 aa2.23□□□□□ -2.05
CD46-216ENST00000490278 ZNF207O43670 478 aaKnown RBP2.23□□□□□ -2.05
CD46-216ENST00000490278 FOXH1O75593 365 aa2.23□□□□□ -2.05
CD46-216ENST00000490278 APCSP02743 223 aa2.23□□□□□ -2.05
CD46-216ENST00000490278 EIF4EP06730 217 aaKnown RBP2.23□□□□□ -2.05
CD46-216ENST00000490278 LINC00869P0C866 280 aa2.23□□□□□ -2.05
CD46-216ENST00000490278 ERGP11308 486 aa2.23□□□□□ -2.05
CD46-216ENST00000490278 SYKP43405 635 aa2.23□□□□□ -2.05
CD46-216ENST00000490278 HCAR3P49019 387 aa2.23□□□□□ -2.05
CD46-216ENST00000490278 CRISP1P54107 249 aa2.23□□□□□ -2.05
CD46-216ENST00000490278 PPP1CBP62140 327 aa2.23□□□□□ -2.05
CD46-216ENST00000490278 CUL2Q13617 745 aa2.23□□□□□ -2.05
CD46-216ENST00000490278 TRAM2Q15035 370 aa2.23□□□□□ -2.05
CD46-216ENST00000490278 XKR4Q5GH76 650 aa2.23□□□□□ -2.05
CD46-216ENST00000490278 AVPI1Q5T686 147 aa2.23□□□□□ -2.05
CD46-216ENST00000490278 NPSR1Q6W5P4 371 aa2.23□□□□□ -2.05
CD46-216ENST00000490278 SHISA6Q6ZSJ9 500 aa2.23□□□□□ -2.05
CD46-216ENST00000490278 BHLHA15Q7RTS1 189 aaPredicted RBP2.23□□□□□ -2.05
CD46-216ENST00000490278 SCD5Q86SK9 330 aa2.23□□□□□ -2.05
CD46-216ENST00000490278 ZNF709Q8N972 641 aa2.23□□□□□ -2.05
CD46-216ENST00000490278 OR10AD1Q8NGE0 317 aa2.23□□□□□ -2.05
CD46-216ENST00000490278 ZNF461Q8TAF7 563 aa2.23□□□□□ -2.05
CD46-216ENST00000490278 LRRC29Q8WV35 223 aa2.23□□□□□ -2.05
CD46-216ENST00000490278 DEDD2Q8WXF8 326 aa2.23□□□□□ -2.05
CD46-216ENST00000490278 OR10C1Q96KK4 312 aa2.23□□□□□ -2.05
CD46-216ENST00000490278 PANX1Q96RD7 426 aa2.23□□□□□ -2.05
CD46-216ENST00000490278 GEMIN7Q9H840 131 aaKnown RBP2.23□□□□□ -2.05
CD46-216ENST00000490278 LYARQ9NX58 379 aaKnown RBP2.23□□□□□ -2.05
CD46-216ENST00000490278 GGA2Q9UJY4 613 aa2.23□□□□□ -2.05
CD46-216ENST00000490278 HYOU1Q9Y4L1 999 aa2.23□□□□□ -2.05
CD46-216ENST00000490278 PTPRTO14522 1441 aa2.23□□□□□ -2.05
CD46-216ENST00000490278 PLA2R1Q13018 1463 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 A0A1B0GW55 424 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 C7orf66A4D0T2 115 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 COLCA2A8K830 154 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 L7N2F9 121 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 RAD51CO43502 376 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 AQP8O94778 261 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 DUX4L2P0CJ85 424 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 DUX4L3P0CJ86 424 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 DUX4L5P0CJ88 424 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 DUX4L6P0CJ89 424 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 DUX4L7P0CJ90 424 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 ATF6P18850 670 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 BCKDHBP21953 392 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 U2AF2P26368 475 aaKnown RBP eCLIP2.22□□□□□ -2.055e-10■■■□□ 16.1
CD46-216ENST00000490278 PRR3P79522 188 aaKnown RBP2.22□□□□□ -2.05
CD46-216ENST00000490278 MERTKQ12866 999 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 SHHQ15465 462 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 LY6EQ16553 131 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 SNRNP35Q16560 246 aaKnown RBP2.22□□□□□ -2.05
CD46-216ENST00000490278 HSDL1Q3SXM5 330 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 CHRFAM7AQ494W8 412 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 COX19Q49B96 90 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 ZNF880Q6PDB4 577 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 MRPL55Q7Z7F7 128 aaKnown RBP2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms