RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 PPP1R2P9O14990 202 aa3.34□□□□□ -1.87
VPS26A-206ENST00000489794 B4GALT5O43286 388 aa3.34□□□□□ -1.87
VPS26A-206ENST00000489794 HUS1O60921 280 aa3.34□□□□□ -1.87
VPS26A-206ENST00000489794 KRT34O76011 436 aa3.34□□□□□ -1.87
VPS26A-206ENST00000489794 CTDNEP1O95476 244 aa3.34□□□□□ -1.87
VPS26A-206ENST00000489794 CLTAP09496 248 aa3.34□□□□□ -1.87
VPS26A-206ENST00000489794 UBCP0CG48 685 aaKnown RBP3.34□□□□□ -1.87
VPS26A-206ENST00000489794 CD9P21926 228 aa3.34□□□□□ -1.87
VPS26A-206ENST00000489794 BCKDHBP21953 392 aa3.34□□□□□ -1.87
VPS26A-206ENST00000489794 FOXN2P32314 431 aa3.34□□□□□ -1.87
VPS26A-206ENST00000489794 NAA10P41227 235 aaPredicted RBP3.34□□□□□ -1.87
VPS26A-206ENST00000489794 TMED10P49755 219 aaKnown RBP3.34□□□□□ -1.87
VPS26A-206ENST00000489794 SSR4P51571 173 aa3.34□□□□□ -1.87
VPS26A-206ENST00000489794 ERCC8Q13216 396 aa3.34□□□□□ -1.87
VPS26A-206ENST00000489794 GINS1Q14691 196 aa3.34□□□□□ -1.87
VPS26A-206ENST00000489794 PON3Q15166 354 aa3.34□□□□□ -1.87
VPS26A-206ENST00000489794 C5orf47Q569G3 176 aa3.34□□□□□ -1.87
VPS26A-206ENST00000489794 LIN9Q5TKA1 542 aa3.34□□□□□ -1.87
VPS26A-206ENST00000489794 Q6ZSR3 168 aa3.34□□□□□ -1.87
VPS26A-206ENST00000489794 PDIK1LQ8N165 341 aa3.34□□□□□ -1.87
VPS26A-206ENST00000489794 TCAIMQ8N3R3 496 aa3.34□□□□□ -1.87
VPS26A-206ENST00000489794 STPG2Q8N412 459 aa3.34□□□□□ -1.87
VPS26A-206ENST00000489794 ASCC1Q8N9N2 400 aaKnown RBP3.34□□□□□ -1.87
VPS26A-206ENST00000489794 PROKR2Q8NFJ6 384 aa3.34□□□□□ -1.87
VPS26A-206ENST00000489794 RAB1CQ92928 201 aa3.34□□□□□ -1.87
VPS26A-206ENST00000489794 TOP1MTQ969P6 601 aa3.34□□□□□ -1.87
VPS26A-206ENST00000489794 CREB3L1Q96BA8 519 aa3.34□□□□□ -1.87
VPS26A-206ENST00000489794 RPF2Q9H7B2 306 aaKnown RBP3.34□□□□□ -1.87
VPS26A-206ENST00000489794 ZNF629Q9UEG4 869 aaPredicted RBP3.34□□□□□ -1.87
VPS26A-206ENST00000489794 IGHV3-74A0A0B4J1X5 117 aa3.33□□□□□ -1.88
VPS26A-206ENST00000489794 A0A0J9YYE9 177 aa3.33□□□□□ -1.88
VPS26A-206ENST00000489794 NMT2O60551 498 aa3.33□□□□□ -1.88
VPS26A-206ENST00000489794 SLC25A14O95258 325 aaPredicted RBP3.33□□□□□ -1.88
VPS26A-206ENST00000489794 TRBC1P01850 177 aa3.33□□□□□ -1.88
VPS26A-206ENST00000489794 ZNF823P16415 610 aa3.33□□□□□ -1.88
VPS26A-206ENST00000489794 PSMC3P17980 439 aa3.33□□□□□ -1.88
VPS26A-206ENST00000489794 HRH1P35367 487 aa3.33□□□□□ -1.88
VPS26A-206ENST00000489794 NSG1P42857 185 aa3.33□□□□□ -1.88
VPS26A-206ENST00000489794 YWHAGP61981 247 aaKnown RBP eCLIP3.33□□□□□ -1.88
VPS26A-206ENST00000489794 ACTA2P62736 377 aa3.33□□□□□ -1.88
VPS26A-206ENST00000489794 ACTC1P68032 377 aa3.33□□□□□ -1.88
VPS26A-206ENST00000489794 ECH1Q13011 328 aa3.33□□□□□ -1.88
VPS26A-206ENST00000489794 PPM1LQ5SGD2 360 aa3.33□□□□□ -1.88
VPS26A-206ENST00000489794 THEM4Q5T1C6 240 aa3.33□□□□□ -1.88
VPS26A-206ENST00000489794 MLIPQ5VWP3 458 aa3.33□□□□□ -1.88
VPS26A-206ENST00000489794 TEX43Q6ZNM6 134 aa3.33□□□□□ -1.88
VPS26A-206ENST00000489794 OAFQ86UD1 273 aa3.33□□□□□ -1.88
VPS26A-206ENST00000489794 MS4A15Q8N5U1 240 aa3.33□□□□□ -1.88
VPS26A-206ENST00000489794 EID2Q8N6I1 236 aa3.33□□□□□ -1.88
VPS26A-206ENST00000489794 OR5T3Q8NGG3 340 aa3.33□□□□□ -1.88
VPS26A-206ENST00000489794 OR10R2Q8NGX6 335 aa3.33□□□□□ -1.88
VPS26A-206ENST00000489794 ATP6V1G3Q96LB4 118 aa3.33□□□□□ -1.88
VPS26A-206ENST00000489794 NEUROG2Q9H2A3 272 aa3.33□□□□□ -1.88
VPS26A-206ENST00000489794 DYRK4Q9NR20 520 aa3.33□□□□□ -1.88
VPS26A-206ENST00000489794 GPATCH2LQ9NWQ4 482 aa3.33□□□□□ -1.88
VPS26A-206ENST00000489794 SLIT3O75094 1523 aa3.33□□□□□ -1.88
VPS26A-206ENST00000489794 COL4A4P53420 1690 aaPredicted RBP3.33□□□□□ -1.88
VPS26A-206ENST00000489794 KCNE1BA0A087WTH5 132 aa3.32□□□□□ -1.88
VPS26A-206ENST00000489794 KBTBD11-OT1A0A1B0GTJ5 212 aa3.32□□□□□ -1.88
VPS26A-206ENST00000489794 A0A1B0GUH1 482 aa3.32□□□□□ -1.88
VPS26A-206ENST00000489794 CIB4A0PJX0 185 aa3.32□□□□□ -1.88
VPS26A-206ENST00000489794 PSMD11O00231 422 aa3.32□□□□□ -1.88
VPS26A-206ENST00000489794 SIRPB1O00241 398 aa3.32□□□□□ -1.88
VPS26A-206ENST00000489794 CDC7O00311 574 aa3.32□□□□□ -1.88
VPS26A-206ENST00000489794 SIVA1O15304 175 aa3.32□□□□□ -1.88
VPS26A-206ENST00000489794 YKT6O15498 198 aa3.32□□□□□ -1.88
VPS26A-206ENST00000489794 CHST1O43916 411 aa3.32□□□□□ -1.88
VPS26A-206ENST00000489794 CCNB2O95067 398 aa3.32□□□□□ -1.88
VPS26A-206ENST00000489794 SNAI1O95863 264 aaPredicted RBP3.32□□□□□ -1.88
VPS26A-206ENST00000489794 SERPINE2P07093 398 aa3.32□□□□□ -1.88
VPS26A-206ENST00000489794 MRPL3P09001 348 aaKnown RBP3.32□□□□□ -1.88
VPS26A-206ENST00000489794 FOLR1P15328 257 aa3.32□□□□□ -1.88
VPS26A-206ENST00000489794 PGAM1P18669 254 aa3.32□□□□□ -1.88
VPS26A-206ENST00000489794 CX3CR1P49238 355 aa3.32□□□□□ -1.88
VPS26A-206ENST00000489794 CCNHP51946 323 aaPredicted RBP3.32□□□□□ -1.88
VPS26A-206ENST00000489794 ARG2P78540 354 aa3.32□□□□□ -1.88
VPS26A-206ENST00000489794 HSDL1Q3SXM5 330 aa3.32□□□□□ -1.88
VPS26A-206ENST00000489794 CCNJQ5T5M9 372 aa3.32□□□□□ -1.88
VPS26A-206ENST00000489794 ANKRD22Q5VYY1 191 aa3.32□□□□□ -1.88
VPS26A-206ENST00000489794 SLC25A25Q6KCM7 469 aa3.32□□□□□ -1.88
VPS26A-206ENST00000489794 PGAM4Q8N0Y7 254 aa3.32□□□□□ -1.88
VPS26A-206ENST00000489794 LIX1Q8N485 282 aa3.32□□□□□ -1.88
VPS26A-206ENST00000489794 NOXO1Q8NFA2 376 aa3.32□□□□□ -1.88
VPS26A-206ENST00000489794 OR1S2Q8NGQ3 325 aa3.32□□□□□ -1.88
VPS26A-206ENST00000489794 CA5BP1Q8WTZ4 195 aa3.32□□□□□ -1.88
VPS26A-206ENST00000489794 FAM3DQ96BQ1 224 aa3.32□□□□□ -1.88
VPS26A-206ENST00000489794 MSANTD3Q96H12 275 aa3.32□□□□□ -1.88
VPS26A-206ENST00000489794 SPIN2AQ99865 258 aa3.32□□□□□ -1.88
VPS26A-206ENST00000489794 SPIN2BQ9BPZ2 258 aa3.32□□□□□ -1.88
VPS26A-206ENST00000489794 CHMP4BQ9H444 224 aaKnown RBP3.32□□□□□ -1.88
VPS26A-206ENST00000489794 FGF20Q9NP95 211 aaPredicted RBP3.32□□□□□ -1.88
VPS26A-206ENST00000489794 FAM49BQ9NUQ9 324 aa3.32□□□□□ -1.88
VPS26A-206ENST00000489794 CLN8Q9UBY8 286 aa3.32□□□□□ -1.88
VPS26A-206ENST00000489794 NUP214P35658 2090 aaPredicted RBP3.31□□□□□ -1.88
VPS26A-206ENST00000489794 A0A1W2PP18 115 aa3.31□□□□□ -1.88
VPS26A-206ENST00000489794 HIDE1A8MVS5 230 aa3.31□□□□□ -1.88
VPS26A-206ENST00000489794 HSBP1L1C9JCN9 74 aa3.31□□□□□ -1.88
VPS26A-206ENST00000489794 K7ERQ8 282 aa3.31□□□□□ -1.88
VPS26A-206ENST00000489794 MRPS12O15235 138 aaKnown RBP3.31□□□□□ -1.88
VPS26A-206ENST00000489794 ENTPD5O75356 428 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms