RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 GMPR2Q9P2T1 348 aaKnown RBP10.42□□□□□ -0.74
CPSF3-204ENST00000489403 PPP1R3CQ9UQK1 317 aa10.42□□□□□ -0.74
CPSF3-204ENST00000489403 TEX13CA0A0J9YWL9 993 aa10.41□□□□□ -0.74
CPSF3-204ENST00000489403 LOC100653049A0A140TA62 436 aa10.41□□□□□ -0.74
CPSF3-204ENST00000489403 CEACAM18A8MTB9 384 aa10.41□□□□□ -0.74
CPSF3-204ENST00000489403 TMEM178BH3BS89 294 aa10.41□□□□□ -0.74
CPSF3-204ENST00000489403 KRT34O76011 436 aa10.41□□□□□ -0.74
CPSF3-204ENST00000489403 IFNW1P05000 195 aa10.41□□□□□ -0.74
CPSF3-204ENST00000489403 CD14P08571 375 aa10.41□□□□□ -0.74
CPSF3-204ENST00000489403 CTLA4P16410 223 aa10.41□□□□□ -0.74
CPSF3-204ENST00000489403 RPL4P36578 427 aaKnown RBP10.41□□□□□ -0.74
CPSF3-204ENST00000489403 GPR4P46093 362 aa10.41□□□□□ -0.74
CPSF3-204ENST00000489403 MMP16P51512 607 aa10.41□□□□□ -0.74
CPSF3-204ENST00000489403 SF3A3Q12874 501 aaKnown RBP eCLIP10.41□□□□□ -0.74
CPSF3-204ENST00000489403 BAMBIQ13145 260 aa10.41□□□□□ -0.74
CPSF3-204ENST00000489403 AQP6Q13520 282 aa10.41□□□□□ -0.74
CPSF3-204ENST00000489403 MAPRE2Q15555 327 aa10.41□□□□□ -0.74
CPSF3-204ENST00000489403 ESCO2Q56NI9 601 aa10.41□□□□□ -0.74
CPSF3-204ENST00000489403 OTPQ5XKR4 325 aa10.41□□□□□ -0.74
CPSF3-204ENST00000489403 C1orf94Q6P1W5 598 aa10.41□□□□□ -0.74
CPSF3-204ENST00000489403 TBPL2Q6SJ96 375 aa10.41□□□□□ -0.74
CPSF3-204ENST00000489403 RNF113BQ8IZP6 322 aaKnown RBP10.41□□□□□ -0.74
CPSF3-204ENST00000489403 OR5AS1Q8N127 324 aa10.41□□□□□ -0.74
CPSF3-204ENST00000489403 PCYOX1LQ8NBM8 494 aa10.41□□□□□ -0.74
CPSF3-204ENST00000489403 FAM156AQ8NDB6 213 aa10.41□□□□□ -0.74
CPSF3-204ENST00000489403 ACOT11Q8WXI4 607 aaPredicted RBP10.41□□□□□ -0.74
CPSF3-204ENST00000489403 ZNF570Q96NI8 536 aa10.41□□□□□ -0.74
CPSF3-204ENST00000489403 GPA33Q99795 319 aa10.41□□□□□ -0.74
CPSF3-204ENST00000489403 ZMAT3Q9HA38 289 aaKnown RBP10.41□□□□□ -0.74
CPSF3-204ENST00000489403 SAR1AQ9NR31 198 aa10.41□□□□□ -0.74
CPSF3-204ENST00000489403 MRGBPQ9NV56 204 aa10.41□□□□□ -0.74
CPSF3-204ENST00000489403 GID8Q9NWU2 228 aa10.41□□□□□ -0.74
CPSF3-204ENST00000489403 GRHPRQ9UBQ7 328 aa10.41□□□□□ -0.74
CPSF3-204ENST00000489403 OR5V1Q9UGF6 321 aa10.41□□□□□ -0.74
CPSF3-204ENST00000489403 CMYA5Q8N3K9 4069 aa10.4□□□□□ -0.74
CPSF3-204ENST00000489403 PRSS37A4D1T9 235 aa10.4□□□□□ -0.74
CPSF3-204ENST00000489403 XKRYO14609 159 aa10.4□□□□□ -0.74
CPSF3-204ENST00000489403 IMPA2O14732 288 aa10.4□□□□□ -0.74
CPSF3-204ENST00000489403 SURF4O15260 269 aa10.4□□□□□ -0.74
CPSF3-204ENST00000489403 RNASE1P07998 156 aaKnown RBP10.4□□□□□ -0.74
CPSF3-204ENST00000489403 MDH2P40926 338 aaKnown RBP10.4□□□□□ -0.74
CPSF3-204ENST00000489403 GUCY1A3Q02108 690 aa10.4□□□□□ -0.74
CPSF3-204ENST00000489403 PAX2Q02962 417 aa10.4□□□□□ -0.74
CPSF3-204ENST00000489403 PAX8Q06710 450 aa10.4□□□□□ -0.74
CPSF3-204ENST00000489403 ZBED5Q49AG3 693 aa10.4□□□□□ -0.74
CPSF3-204ENST00000489403 CCDC92Q53HC0 331 aaPredicted RBP10.4□□□□□ -0.74
CPSF3-204ENST00000489403 CGB2Q6NT52 195 aa10.4□□□□□ -0.74
CPSF3-204ENST00000489403 ZNF730Q6ZMV8 503 aa10.4□□□□□ -0.74
CPSF3-204ENST00000489403 MBOAT2Q6ZWT7 520 aa10.4□□□□□ -0.74
CPSF3-204ENST00000489403 MUC20Q8N307 709 aaPredicted RBP10.4□□□□□ -0.74
CPSF3-204ENST00000489403 ZNF420Q8TAQ5 688 aaPredicted RBP10.4□□□□□ -0.74
CPSF3-204ENST00000489403 LZICQ8WZA0 190 aa10.4□□□□□ -0.74
CPSF3-204ENST00000489403 PTP4A1Q93096 173 aa10.4□□□□□ -0.74
CPSF3-204ENST00000489403 RASD2Q96D21 266 aa10.4□□□□□ -0.74
CPSF3-204ENST00000489403 COG8Q96MW5 612 aa10.4□□□□□ -0.74
CPSF3-204ENST00000489403 UNKLQ9H9P5 680 aaKnown RBP10.4□□□□□ -0.74
CPSF3-204ENST00000489403 GCM1Q9NP62 436 aa10.4□□□□□ -0.74
CPSF3-204ENST00000489403 CMTM6Q9NX76 183 aa10.4□□□□□ -0.74
CPSF3-204ENST00000489403 ASH2LQ9UBL3 628 aa10.4□□□□□ -0.74
CPSF3-204ENST00000489403 LRCH1Q9Y2L9 728 aa10.4□□□□□ -0.74
CPSF3-204ENST00000489403 IGHV3OR16-10A0A075B7F0 116 aa10.39□□□□□ -0.75
CPSF3-204ENST00000489403 OR6C6A6NF89 314 aa10.39□□□□□ -0.75
CPSF3-204ENST00000489403 AHCYL1O43865 530 aa10.39□□□□□ -0.75
CPSF3-204ENST00000489403 ZNF205O95201 554 aa10.39□□□□□ -0.75
CPSF3-204ENST00000489403 DBHP09172 617 aa10.39□□□□□ -0.75
CPSF3-204ENST00000489403 WNT2P09544 360 aa10.39□□□□□ -0.75
CPSF3-204ENST00000489403 IGHV4-38-2P0DP08 117 aa10.39□□□□□ -0.75
CPSF3-204ENST00000489403 TROVE2P10155 538 aaKnown RBP eCLIP10.39□□□□□ -0.75
CPSF3-204ENST00000489403 RAC2P15153 192 aa10.39□□□□□ -0.75
CPSF3-204ENST00000489403 CD80P33681 288 aa10.39□□□□□ -0.75
CPSF3-204ENST00000489403 LSM6P62312 80 aaKnown RBP10.39□□□□□ -0.75
CPSF3-204ENST00000489403 KRR1Q13601 381 aaKnown RBP10.39□□□□□ -0.75
CPSF3-204ENST00000489403 FBXW12Q6X9E4 464 aa10.39□□□□□ -0.75
CPSF3-204ENST00000489403 TMPRSS11FQ6ZWK6 438 aa10.39□□□□□ -0.75
CPSF3-204ENST00000489403 JAZF1Q86VZ6 243 aa10.39□□□□□ -0.75
CPSF3-204ENST00000489403 PARP8Q8N3A8 854 aa10.39□□□□□ -0.75
CPSF3-204ENST00000489403 ATG16L2Q8NAA4 619 aa10.39□□□□□ -0.75
CPSF3-204ENST00000489403 OR10AD1Q8NGE0 317 aa10.39□□□□□ -0.75
CPSF3-204ENST00000489403 OR52E2Q8NGJ4 325 aa10.39□□□□□ -0.75
CPSF3-204ENST00000489403 TAF15Q92804 592 aaKnown RBP eCLIP10.39□□□□□ -0.75
CPSF3-204ENST00000489403 RCN3Q96D15 328 aa10.39□□□□□ -0.75
CPSF3-204ENST00000489403 MEGF10Q96KG7 1140 aa10.39□□□□□ -0.75
CPSF3-204ENST00000489403 SSBP3Q9BWW4 388 aaPredicted RBP10.39□□□□□ -0.75
CPSF3-204ENST00000489403 MS4A7Q9GZW8 240 aaPredicted RBP10.39□□□□□ -0.75
CPSF3-204ENST00000489403 SYT4Q9H2B2 425 aa10.39□□□□□ -0.75
CPSF3-204ENST00000489403 PTTG3PQ9NZH4 202 aa10.39□□□□□ -0.75
CPSF3-204ENST00000489403 COA3Q9Y2R0 106 aaPredicted RBP10.39□□□□□ -0.75
CPSF3-204ENST00000489403 SOX21Q9Y651 276 aaPredicted RBP10.39□□□□□ -0.75
CPSF3-204ENST00000489403 MEGF8Q7Z7M0 2845 aa10.39□□□□□ -0.75
CPSF3-204ENST00000489403 TRAV40A0A0B4J280 105 aa10.38□□□□□ -0.75
CPSF3-204ENST00000489403 IGHV2-70DA0A0C4DH43 119 aa10.38□□□□□ -0.75
CPSF3-204ENST00000489403 H0YL77 283 aa10.38□□□□□ -0.75
CPSF3-204ENST00000489403 CLDN34H7C241 214 aa10.38□□□□□ -0.75
CPSF3-204ENST00000489403 J3QW42 95 aa10.38□□□□□ -0.75
CPSF3-204ENST00000489403 IFNL4K9M1U5 179 aa10.38□□□□□ -0.75
CPSF3-204ENST00000489403 RER1O15258 196 aa10.38□□□□□ -0.75
CPSF3-204ENST00000489403 MLNRO43193 412 aa10.38□□□□□ -0.75
CPSF3-204ENST00000489403 SLC16A7O60669 478 aa10.38□□□□□ -0.75
CPSF3-204ENST00000489403 KHDRBS3O75525 346 aaKnown RBP10.38□□□□□ -0.75
CPSF3-204ENST00000489403 ZNF682O95780 498 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms