RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 OR52B2Q96RD2 323 aa13.42□□□□□ -0.26
USP48-210ENST00000489108 PAIP2Q9BPZ3 127 aaKnown RBP13.42□□□□□ -0.26
USP48-210ENST00000489108 PRSS27Q9BQR3 290 aa13.42□□□□□ -0.26
USP48-210ENST00000489108 IKZF5Q9H5V7 419 aa13.42□□□□□ -0.26
USP48-210ENST00000489108 TUBG2Q9NRH3 451 aa13.42□□□□□ -0.26
USP48-210ENST00000489108 VAPAQ9P0L0 249 aa13.42□□□□□ -0.26
USP48-210ENST00000489108 KIF17Q9P2E2 1029 aa13.42□□□□□ -0.26
USP48-210ENST00000489108 STX18Q9P2W9 335 aaKnown RBP13.42□□□□□ -0.26
USP48-210ENST00000489108 NDRG4Q9ULP0 352 aaKnown RBP13.42□□□□□ -0.26
USP48-210ENST00000489108 A0A0U1RQK1 487 aa13.41□□□□□ -0.26
USP48-210ENST00000489108 ZNF879B4DU55 563 aa13.41□□□□□ -0.26
USP48-210ENST00000489108 PHYHO14832 338 aa13.41□□□□□ -0.26
USP48-210ENST00000489108 OPN1SWP03999 348 aa13.41□□□□□ -0.26
USP48-210ENST00000489108 OPN1MWP04001 364 aa13.41□□□□□ -0.26
USP48-210ENST00000489108 SCG5P05408 212 aa13.41□□□□□ -0.26
USP48-210ENST00000489108 OPN1MW2P0DN77 364 aa13.41□□□□□ -0.26
USP48-210ENST00000489108 OPN1MW3P0DN78 364 aa13.41□□□□□ -0.26
USP48-210ENST00000489108 MMP9P14780 707 aa13.41□□□□□ -0.26
USP48-210ENST00000489108 LOXL3P58215 753 aa13.41□□□□□ -0.26
USP48-210ENST00000489108 GDPGP1Q6ZNW5 385 aa13.41□□□□□ -0.26
USP48-210ENST00000489108 RBP7Q96R05 134 aa13.41□□□□□ -0.26
USP48-210ENST00000489108 TRIM15Q9C019 465 aa13.41□□□□□ -0.26
USP48-210ENST00000489108 IGHV1-69DA0A0B4J2H0 117 aa13.4□□□□□ -0.26
USP48-210ENST00000489108 ZNF816-ZNF321PA0A0X1KG74 233 aa13.4□□□□□ -0.26
USP48-210ENST00000489108 M0QX08 132 aa13.4□□□□□ -0.26
USP48-210ENST00000489108 OR7A10O76100 309 aa13.4□□□□□ -0.26
USP48-210ENST00000489108 FSTL3O95633 263 aa13.4□□□□□ -0.26
USP48-210ENST00000489108 IGHV1-69P01742 117 aa13.4□□□□□ -0.26
USP48-210ENST00000489108 MT-ND1P03886 318 aa13.4□□□□□ -0.26
USP48-210ENST00000489108 VSIG8P0DPA2 414 aa13.4□□□□□ -0.26
USP48-210ENST00000489108 GPX2P18283 190 aa13.4□□□□□ -0.26
USP48-210ENST00000489108 PPIBP23284 216 aaKnown RBP13.4□□□□□ -0.26
USP48-210ENST00000489108 GUCA1AP43080 201 aaPredicted RBP13.4□□□□□ -0.26
USP48-210ENST00000489108 SRP9P49458 86 aaKnown RBP13.4□□□□□ -0.26
USP48-210ENST00000489108 GUCY1A3Q02108 690 aa13.4□□□□□ -0.26
USP48-210ENST00000489108 EGR3Q06889 387 aa13.4□□□□□ -0.26
USP48-210ENST00000489108 ZNF181Q2M3W8 571 aa13.4□□□□□ -0.26
USP48-210ENST00000489108 C1orf94Q6P1W5 598 aa13.4□□□□□ -0.26
USP48-210ENST00000489108 DCDC5Q6ZRR9 648 aa13.4□□□□□ -0.26
USP48-210ENST00000489108 FOXL2NBQ6ZUU3 175 aa13.4□□□□□ -0.26
USP48-210ENST00000489108 SLC30A8Q8IWU4 369 aa13.4□□□□□ -0.26
USP48-210ENST00000489108 C19orf18Q8NEA5 215 aa13.4□□□□□ -0.26
USP48-210ENST00000489108 OR13G1Q8NGZ3 307 aa13.4□□□□□ -0.26
USP48-210ENST00000489108 PFN4Q8NHR9 129 aa13.4□□□□□ -0.26
USP48-210ENST00000489108 LHX4Q969G2 390 aa13.4□□□□□ -0.26
USP48-210ENST00000489108 WDFY2Q96P53 400 aa13.4□□□□□ -0.26
USP48-210ENST00000489108 SSU72Q9NP77 194 aaKnown RBP13.4□□□□□ -0.26
USP48-210ENST00000489108 KCNK9Q9NPC2 374 aa13.4□□□□□ -0.26
USP48-210ENST00000489108 A0A1W2PPL8 197 aa13.39□□□□□ -0.27
USP48-210ENST00000489108 GMNCA6NCL1 334 aa13.39□□□□□ -0.27
USP48-210ENST00000489108 LRRC30A6NM36 301 aa13.39□□□□□ -0.27
USP48-210ENST00000489108 C12orf71A8MTZ7 269 aa13.39□□□□□ -0.27
USP48-210ENST00000489108 TSPAN9O75954 239 aa13.39□□□□□ -0.27
USP48-210ENST00000489108 COX5BP10606 129 aa13.39□□□□□ -0.27
USP48-210ENST00000489108 RAC2P15153 192 aa13.39□□□□□ -0.27
USP48-210ENST00000489108 HTR5AP47898 357 aa13.39□□□□□ -0.27
USP48-210ENST00000489108 TOP3AQ13472 1001 aaPredicted RBP13.39□□□□□ -0.27
USP48-210ENST00000489108 PAGE3Q5JUK9 113 aa13.39□□□□□ -0.27
USP48-210ENST00000489108 VAX1Q5SQQ9 334 aa13.39□□□□□ -0.27
USP48-210ENST00000489108 OR2T2Q6IF00 324 aa13.39□□□□□ -0.27
USP48-210ENST00000489108 VASH1Q7L8A9 365 aaPredicted RBP13.39□□□□□ -0.27
USP48-210ENST00000489108 MAVSQ7Z434 540 aa13.39□□□□□ -0.27
USP48-210ENST00000489108 SYT9Q86SS6 491 aa13.39□□□□□ -0.27
USP48-210ENST00000489108 LDLRAD3Q86YD5 345 aa13.39□□□□□ -0.27
USP48-210ENST00000489108 C1orf87Q8N0U7 546 aa13.39□□□□□ -0.27
USP48-210ENST00000489108 OR8G5Q8NG78 346 aa13.39□□□□□ -0.27
USP48-210ENST00000489108 SLC7A6Q92536 515 aa13.39□□□□□ -0.27
USP48-210ENST00000489108 ALG12Q9BV10 488 aa13.39□□□□□ -0.27
USP48-210ENST00000489108 TMEM109Q9BVC6 243 aa13.39□□□□□ -0.27
USP48-210ENST00000489108 DPAGT1Q9H3H5 408 aa13.39□□□□□ -0.27
USP48-210ENST00000489108 TXNIPQ9H3M7 391 aa13.39□□□□□ -0.27
USP48-210ENST00000489108 C20orf141Q9NUB4 165 aa13.39□□□□□ -0.27
USP48-210ENST00000489108 THAP1Q9NVV9 213 aa13.39□□□□□ -0.27
USP48-210ENST00000489108 GMEB1Q9Y692 573 aa13.39□□□□□ -0.27
USP48-210ENST00000489108 NOTCH3Q9UM47 2321 aa13.38□□□□□ -0.27
USP48-210ENST00000489108 TRBV5-3A0A0A0MS03 114 aa13.38□□□□□ -0.27
USP48-210ENST00000489108 F5H5P2 479 aa13.38□□□□□ -0.27
USP48-210ENST00000489108 LIPFP07098 398 aa13.38□□□□□ -0.27
USP48-210ENST00000489108 TSPAN19P0C672 248 aa13.38□□□□□ -0.27
USP48-210ENST00000489108 NR2C1P13056 603 aa13.38□□□□□ -0.27
USP48-210ENST00000489108 MSR1P21757 451 aa13.38□□□□□ -0.27
USP48-210ENST00000489108 PSMB10P40306 273 aa13.38□□□□□ -0.27
USP48-210ENST00000489108 CD276Q5ZPR3 534 aa13.38□□□□□ -0.27
USP48-210ENST00000489108 DHRS7BQ6IAN0 325 aaPredicted RBP13.38□□□□□ -0.27
USP48-210ENST00000489108 FUNDC1Q8IVP5 155 aa13.38□□□□□ -0.27
USP48-210ENST00000489108 NKAIN4Q8IVV8 208 aa13.38□□□□□ -0.27
USP48-210ENST00000489108 PDZD9Q8IXQ8 264 aa13.38□□□□□ -0.27
USP48-210ENST00000489108 SCCPDHQ8NBX0 429 aa13.38□□□□□ -0.27
USP48-210ENST00000489108 SGTBQ96EQ0 304 aa13.38□□□□□ -0.27
USP48-210ENST00000489108 TECTBQ96PL2 329 aa13.38□□□□□ -0.27
USP48-210ENST00000489108 EMC7Q9NPA0 242 aa13.38□□□□□ -0.27
USP48-210ENST00000489108 PTTG3PQ9NZH4 202 aa13.38□□□□□ -0.27
USP48-210ENST00000489108 EVPLLA8MZ36 301 aa13.37□□□□□ -0.27
USP48-210ENST00000489108 RGS16O15492 202 aaPredicted RBP13.37□□□□□ -0.27
USP48-210ENST00000489108 MLNRO43193 412 aa13.37□□□□□ -0.27
USP48-210ENST00000489108 DOK2O60496 412 aa13.37□□□□□ -0.27
USP48-210ENST00000489108 SNNO75324 88 aaPredicted RBP13.37□□□□□ -0.27
USP48-210ENST00000489108 CD247P20963 164 aa13.37□□□□□ -0.27
USP48-210ENST00000489108 FUT4P22083 530 aa13.37□□□□□ -0.27
USP48-210ENST00000489108 HOXA4Q00056 320 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms