RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 OR52D1Q9H346 318 aa19.53■□□□□ 0.72
COL9A3-213ENST00000489045 MSL2Q9HCI7 577 aa19.53■□□□□ 0.72
COL9A3-213ENST00000489045 KLHL21Q9UJP4 597 aa19.53■□□□□ 0.72
COL9A3-213ENST00000489045 GRIP1Q9Y3R0 1128 aa19.53■□□□□ 0.72
COL9A3-213ENST00000489045 OR6C6A6NF89 314 aa19.52■□□□□ 0.72
COL9A3-213ENST00000489045 DCTN3O75935 186 aa19.52■□□□□ 0.72
COL9A3-213ENST00000489045 GPANK1O95872 356 aa19.52■□□□□ 0.72
COL9A3-213ENST00000489045 CCDC92Q53HC0 331 aaPredicted RBP19.52■□□□□ 0.72
COL9A3-213ENST00000489045 SPRNQ5BIV9 151 aa19.52■□□□□ 0.72
COL9A3-213ENST00000489045 ZMAT1Q5H9K5 638 aa19.52■□□□□ 0.72
COL9A3-213ENST00000489045 MTX3Q5HYI7 312 aa19.52■□□□□ 0.72
COL9A3-213ENST00000489045 C16orf89Q6UX73 402 aa19.52■□□□□ 0.72
COL9A3-213ENST00000489045 DEFB107AQ8IZN7 70 aa19.52■□□□□ 0.72
COL9A3-213ENST00000489045 CCL17Q92583 94 aa19.52■□□□□ 0.72
COL9A3-213ENST00000489045 TIMD4Q96H15 378 aa19.52■□□□□ 0.72
COL9A3-213ENST00000489045 ZDHHC8Q9ULC8 765 aa19.52■□□□□ 0.72
COL9A3-213ENST00000489045 POLR1DQ9Y2S0 133 aa19.52■□□□□ 0.72
COL9A3-213ENST00000489045 DYSFO75923 2080 aa19.52■□□□□ 0.71
COL9A3-213ENST00000489045 DCTN6O00399 190 aa19.51■□□□□ 0.71
COL9A3-213ENST00000489045 OR10H3O60404 316 aa19.51■□□□□ 0.71
COL9A3-213ENST00000489045 UBOX5O94941 541 aa19.51■□□□□ 0.71
COL9A3-213ENST00000489045 FPR3P25089 353 aa19.51■□□□□ 0.71
COL9A3-213ENST00000489045 RRM2P31350 389 aa19.51■□□□□ 0.71
COL9A3-213ENST00000489045 SLC6A6P31641 620 aa19.51■□□□□ 0.71
COL9A3-213ENST00000489045 CENPAP49450 140 aa19.51■□□□□ 0.71
COL9A3-213ENST00000489045 MXRA7P84157 204 aa19.51■□□□□ 0.71
COL9A3-213ENST00000489045 KCNMB1Q16558 191 aa19.51■□□□□ 0.71
COL9A3-213ENST00000489045 RFX4Q33E94 735 aa19.51■□□□□ 0.71
COL9A3-213ENST00000489045 C1orf94Q6P1W5 598 aa19.51■□□□□ 0.71
COL9A3-213ENST00000489045 DNM1P34Q6PK57 102 aa19.51■□□□□ 0.71
COL9A3-213ENST00000489045 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.51■□□□□ 0.71
COL9A3-213ENST00000489045 OR1F12Q8NHA8 337 aa19.51■□□□□ 0.71
COL9A3-213ENST00000489045 RAB1CQ92928 201 aa19.51■□□□□ 0.71
COL9A3-213ENST00000489045 RAB39BQ96DA2 213 aa19.51■□□□□ 0.71
COL9A3-213ENST00000489045 DIRC2Q96SL1 478 aa19.51■□□□□ 0.71
COL9A3-213ENST00000489045 NDE1Q9NXR1 346 aa19.51■□□□□ 0.71
COL9A3-213ENST00000489045 STARD10Q9Y365 291 aa19.51■□□□□ 0.71
COL9A3-213ENST00000489045 RER1O15258 196 aa19.5■□□□□ 0.71
COL9A3-213ENST00000489045 DEAF1O75398 565 aaPredicted RBP19.5■□□□□ 0.71
COL9A3-213ENST00000489045 CD55P08174 381 aa19.5■□□□□ 0.71
COL9A3-213ENST00000489045 TUBG1P23258 451 aa19.5■□□□□ 0.71
COL9A3-213ENST00000489045 CRABP1P29762 137 aa19.5■□□□□ 0.71
COL9A3-213ENST00000489045 CDK5R2Q13319 367 aa19.5■□□□□ 0.71
COL9A3-213ENST00000489045 MEP1BQ16820 701 aa19.5■□□□□ 0.71
COL9A3-213ENST00000489045 LEG1Q6P5S2 330 aa19.5■□□□□ 0.71
COL9A3-213ENST00000489045 JAZF1Q86VZ6 243 aa19.5■□□□□ 0.71
COL9A3-213ENST00000489045 ZDHHC21Q8IVQ6 265 aa19.5■□□□□ 0.71
COL9A3-213ENST00000489045 RFLNBQ8N5W9 214 aa19.5■□□□□ 0.71
COL9A3-213ENST00000489045 SAMD8Q96LT4 415 aa19.5■□□□□ 0.71
COL9A3-213ENST00000489045 IL1RAPQ9NPH3 570 aa19.5■□□□□ 0.71
COL9A3-213ENST00000489045 TUBG2Q9NRH3 451 aa19.5■□□□□ 0.71
COL9A3-213ENST00000489045 PURGQ9UJV8 347 aaKnown RBP19.5■□□□□ 0.71
COL9A3-213ENST00000489045 IGLV1-36A0A0B4J1U3 117 aa19.49■□□□□ 0.71
COL9A3-213ENST00000489045 TRAV20A0A0B4J274 112 aa19.49■□□□□ 0.71
COL9A3-213ENST00000489045 IGHV2-5P01817 119 aa19.49■□□□□ 0.71
COL9A3-213ENST00000489045 DBHP09172 617 aa19.49■□□□□ 0.71
COL9A3-213ENST00000489045 KITLGP21583 273 aa19.49■□□□□ 0.71
COL9A3-213ENST00000489045 TNFAIP6P98066 277 aaPredicted RBP19.49■□□□□ 0.71
COL9A3-213ENST00000489045 HNRNPA0Q13151 305 aaKnown RBP19.49■□□□□ 0.71
COL9A3-213ENST00000489045 ACSM5Q6NUN0 579 aa19.49■□□□□ 0.71
COL9A3-213ENST00000489045 PGM2L1Q6PCE3 622 aa19.49■□□□□ 0.71
COL9A3-213ENST00000489045 CMBLQ96DG6 245 aa19.49■□□□□ 0.71
COL9A3-213ENST00000489045 NMNAT3Q96T66 252 aa19.49■□□□□ 0.71
COL9A3-213ENST00000489045 C19orf24Q9BVV8 132 aa19.49■□□□□ 0.71
COL9A3-213ENST00000489045 IFT27Q9BW83 186 aa19.49■□□□□ 0.71
COL9A3-213ENST00000489045 ATPIF1Q9UII2 106 aa19.49■□□□□ 0.71
COL9A3-213ENST00000489045 TMCC3Q9ULS5 477 aa19.49■□□□□ 0.71
COL9A3-213ENST00000489045 B9D1Q9UPM9 204 aa19.49■□□□□ 0.71
COL9A3-213ENST00000489045 LHFPL6Q9Y693 200 aa19.49■□□□□ 0.71
COL9A3-213ENST00000489045 WNK2Q9Y3S1 2297 aa19.48■□□□□ 0.71
COL9A3-213ENST00000489045 ARPC3O15145 178 aa19.48■□□□□ 0.71
COL9A3-213ENST00000489045 RENP00797 406 aa19.48■□□□□ 0.71
COL9A3-213ENST00000489045 ANPEPP15144 967 aa19.48■□□□□ 0.71
COL9A3-213ENST00000489045 HIST1H1CP16403 213 aaKnown RBP19.48■□□□□ 0.71
COL9A3-213ENST00000489045 IFNGR2P38484 337 aa19.48■□□□□ 0.71
COL9A3-213ENST00000489045 GSSP48637 474 aa19.48■□□□□ 0.71
COL9A3-213ENST00000489045 ERFP50548 548 aa19.48■□□□□ 0.71
COL9A3-213ENST00000489045 SLC3A1Q07837 685 aa19.48■□□□□ 0.71
COL9A3-213ENST00000489045 DBPQ10586 325 aaPredicted RBP19.48■□□□□ 0.71
COL9A3-213ENST00000489045 SPATS1Q496A3 300 aa19.48■□□□□ 0.71
COL9A3-213ENST00000489045 Q6ZR03 302 aa19.48■□□□□ 0.71
COL9A3-213ENST00000489045 ZNF771Q7L3S4 317 aaPredicted RBP19.48■□□□□ 0.71
COL9A3-213ENST00000489045 OR6V1Q8N148 313 aa19.48■□□□□ 0.71
COL9A3-213ENST00000489045 OR4K13Q8NH42 304 aa19.48■□□□□ 0.71
COL9A3-213ENST00000489045 COG8Q96MW5 612 aa19.48■□□□□ 0.71
COL9A3-213ENST00000489045 GAL3ST1Q99999 423 aa19.48■□□□□ 0.71
COL9A3-213ENST00000489045 SRA1Q9HD15 236 aaKnown RBP19.48■□□□□ 0.71
COL9A3-213ENST00000489045 ISPDA4D126 451 aa19.47■□□□□ 0.71
COL9A3-213ENST00000489045 TCF21O43680 179 aa19.47■□□□□ 0.71
COL9A3-213ENST00000489045 HIST1H3AP68431 136 aa19.47■□□□□ 0.71
COL9A3-213ENST00000489045 HIST2H3PS2Q5TEC6 136 aa19.47■□□□□ 0.71
COL9A3-213ENST00000489045 LIPNQ5VXI9 398 aa19.47■□□□□ 0.71
COL9A3-213ENST00000489045 FAHD2BQ6P2I3 314 aaPredicted RBP19.47■□□□□ 0.71
COL9A3-213ENST00000489045 PGBD2Q6P3X8 592 aa19.47■□□□□ 0.71
COL9A3-213ENST00000489045 CORO6Q6QEF8 472 aa19.47■□□□□ 0.71
COL9A3-213ENST00000489045 CYP2R1Q6VVX0 501 aa19.47■□□□□ 0.71
COL9A3-213ENST00000489045 ZNF620Q6ZNG0 422 aa19.47■□□□□ 0.71
COL9A3-213ENST00000489045 HIST2H3AQ71DI3 136 aa19.47■□□□□ 0.71
COL9A3-213ENST00000489045 GJC3Q8NFK1 279 aa19.47■□□□□ 0.71
COL9A3-213ENST00000489045 OR2Z1Q8NG97 314 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms