RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 DEAF1O75398 565 aaPredicted RBP12.24□□□□□ -0.45
BRCA1-218ENST00000489037 CIB2O75838 187 aa12.24□□□□□ -0.45
BRCA1-218ENST00000489037 IGHV3-13P01766 116 aa12.24□□□□□ -0.45
BRCA1-218ENST00000489037 GAAP10253 952 aa12.24□□□□□ -0.45
BRCA1-218ENST00000489037 NAT2P11245 290 aa12.24□□□□□ -0.45
BRCA1-218ENST00000489037 ANXA8P13928 327 aa12.24□□□□□ -0.45
BRCA1-218ENST00000489037 LIPAP38571 399 aa12.24□□□□□ -0.45
BRCA1-218ENST00000489037 GGTLC2Q14390 218 aa12.24□□□□□ -0.45
BRCA1-218ENST00000489037 PCGF3Q3KNV8 242 aa12.24□□□□□ -0.45
BRCA1-218ENST00000489037 ALKBH6Q3KRA9 238 aa12.24□□□□□ -0.45
BRCA1-218ENST00000489037 SPATA46Q5T0L3 261 aa12.24□□□□□ -0.45
BRCA1-218ENST00000489037 CD300LDQ6UXZ3 194 aa12.24□□□□□ -0.45
BRCA1-218ENST00000489037 NAV3Q8IVL0 2385 aa12.24□□□□□ -0.45
BRCA1-218ENST00000489037 ZNF101Q8IZC7 436 aa12.24□□□□□ -0.45
BRCA1-218ENST00000489037 ZNF786Q8N393 782 aa12.24□□□□□ -0.45
BRCA1-218ENST00000489037 PAPD5Q8NDF8 572 aaKnown RBP12.24□□□□□ -0.45
BRCA1-218ENST00000489037 SLC26A10Q8NG04 563 aa12.24□□□□□ -0.45
BRCA1-218ENST00000489037 OR8D4Q8NGM9 314 aa12.24□□□□□ -0.45
BRCA1-218ENST00000489037 IPCEF1Q8WWN9 437 aaPredicted RBP12.24□□□□□ -0.45
BRCA1-218ENST00000489037 TEX12Q9BXU0 123 aa12.24□□□□□ -0.45
BRCA1-218ENST00000489037 PLA2G12AQ9BZM1 189 aa12.24□□□□□ -0.45
BRCA1-218ENST00000489037 OR2J1Q9GZK6 312 aa12.24□□□□□ -0.45
BRCA1-218ENST00000489037 HDHD2Q9H0R4 259 aa12.24□□□□□ -0.45
BRCA1-218ENST00000489037 FN3KQ9H479 309 aa12.24□□□□□ -0.45
BRCA1-218ENST00000489037 CYSLTR2Q9NS75 346 aa12.24□□□□□ -0.45
BRCA1-218ENST00000489037 TBCCD1Q9NVR7 557 aa12.24□□□□□ -0.45
BRCA1-218ENST00000489037 ARMC1Q9NVT9 282 aa12.24□□□□□ -0.45
BRCA1-218ENST00000489037 ATPIF1Q9UII2 106 aa12.24□□□□□ -0.45
BRCA1-218ENST00000489037 KCNG2Q9UJ96 466 aa12.24□□□□□ -0.45
BRCA1-218ENST00000489037 C17orf100A8MU93 164 aa12.23□□□□□ -0.45
BRCA1-218ENST00000489037 RER1O15258 196 aa12.23□□□□□ -0.45
BRCA1-218ENST00000489037 ICMTO60725 284 aa12.23□□□□□ -0.45
BRCA1-218ENST00000489037 GPANK1O95872 356 aa12.23□□□□□ -0.45
BRCA1-218ENST00000489037 ZNF3P17036 446 aa12.23□□□□□ -0.45
BRCA1-218ENST00000489037 POU1F1P28069 291 aa12.23□□□□□ -0.45
BRCA1-218ENST00000489037 NR4A2P43354 598 aa12.23□□□□□ -0.45
BRCA1-218ENST00000489037 RGS6P49758 472 aa12.23□□□□□ -0.45
BRCA1-218ENST00000489037 ERFP50548 548 aa12.23□□□□□ -0.45
BRCA1-218ENST00000489037 MEP1BQ16820 701 aa12.23□□□□□ -0.45
BRCA1-218ENST00000489037 CCDC92Q53HC0 331 aaPredicted RBP12.23□□□□□ -0.45
BRCA1-218ENST00000489037 ZMAT1Q5H9K5 638 aa12.23□□□□□ -0.45
BRCA1-218ENST00000489037 ELFN2Q5R3F8 820 aa12.23□□□□□ -0.45
BRCA1-218ENST00000489037 C1orf146Q5VVC0 180 aa12.23□□□□□ -0.45
BRCA1-218ENST00000489037 MBNL2Q5VZF2 373 aaKnown RBP12.23□□□□□ -0.45
BRCA1-218ENST00000489037 OTPQ5XKR4 325 aa12.23□□□□□ -0.45
BRCA1-218ENST00000489037 RFPL4BQ6ZWI9 263 aa12.23□□□□□ -0.45
BRCA1-218ENST00000489037 CYB561A3Q8NBI2 242 aa12.23□□□□□ -0.45
BRCA1-218ENST00000489037 SLC37A3Q8NCC5 494 aa12.23□□□□□ -0.45
BRCA1-218ENST00000489037 OR5L1Q8NGL2 311 aa12.23□□□□□ -0.45
BRCA1-218ENST00000489037 KLF14Q8TD94 323 aaPredicted RBP12.23□□□□□ -0.45
BRCA1-218ENST00000489037 RDH5Q92781 318 aa12.23□□□□□ -0.45
BRCA1-218ENST00000489037 MARS2Q96GW9 593 aaKnown RBP12.23□□□□□ -0.45
BRCA1-218ENST00000489037 PITX2Q99697 317 aa12.23□□□□□ -0.45
BRCA1-218ENST00000489037 COQ7Q99807 217 aa12.23□□□□□ -0.45
BRCA1-218ENST00000489037 NIPSNAP1Q9BPW8 284 aa12.23□□□□□ -0.45
BRCA1-218ENST00000489037 DECR2Q9NUI1 292 aa12.23□□□□□ -0.45
BRCA1-218ENST00000489037 KIF17Q9P2E2 1029 aa12.23□□□□□ -0.45
BRCA1-218ENST00000489037 CGGBP1Q9UFW8 167 aaPredicted RBP12.23□□□□□ -0.45
BRCA1-218ENST00000489037 TLX2O43763 284 aaPredicted RBP12.22□□□□□ -0.45
BRCA1-218ENST00000489037 CD5LO43866 347 aa12.22□□□□□ -0.45
BRCA1-218ENST00000489037 TIMM8AO60220 97 aaPredicted RBP12.22□□□□□ -0.45
BRCA1-218ENST00000489037 NGFP01138 241 aa12.22□□□□□ -0.45
BRCA1-218ENST00000489037 IGFBP1P08833 259 aaPredicted RBP12.22□□□□□ -0.45
BRCA1-218ENST00000489037 PAICSP22234 425 aaKnown RBP12.22□□□□□ -0.45
BRCA1-218ENST00000489037 FMO3P31513 532 aa12.22□□□□□ -0.45
BRCA1-218ENST00000489037 PYCR1P32322 319 aa12.22□□□□□ -0.45
BRCA1-218ENST00000489037 GRK5P34947 590 aa12.22□□□□□ -0.45
BRCA1-218ENST00000489037 ZNF81P51508 661 aa12.22□□□□□ -0.45
BRCA1-218ENST00000489037 BLVRAP53004 296 aa12.22□□□□□ -0.45
BRCA1-218ENST00000489037 ECH1Q13011 328 aa12.22□□□□□ -0.45
BRCA1-218ENST00000489037 TMEM249Q2WGJ8 235 aa12.22□□□□□ -0.45
BRCA1-218ENST00000489037 SLC27A4Q6P1M0 643 aa12.22□□□□□ -0.45
BRCA1-218ENST00000489037 CORO6Q6QEF8 472 aa12.22□□□□□ -0.45
BRCA1-218ENST00000489037 CCDC121Q6ZUS5 278 aa12.22□□□□□ -0.45
BRCA1-218ENST00000489037 LINC00346Q8IVM7 164 aa12.22□□□□□ -0.45
BRCA1-218ENST00000489037 ATG16L2Q8NAA4 619 aa12.22□□□□□ -0.45
BRCA1-218ENST00000489037 OR4Q3Q8NH05 313 aa12.22□□□□□ -0.45
BRCA1-218ENST00000489037 OTULINQ96BN8 352 aa12.22□□□□□ -0.45
BRCA1-218ENST00000489037 NRBF2Q96F24 287 aa12.22□□□□□ -0.45
BRCA1-218ENST00000489037 YAE1D1Q9NRH1 226 aa12.22□□□□□ -0.45
BRCA1-218ENST00000489037 NKIRAS2Q9NYR9 191 aa12.22□□□□□ -0.45
BRCA1-218ENST00000489037 LHFPL6Q9Y693 200 aa12.22□□□□□ -0.45
BRCA1-218ENST00000489037 VWC2LB2RUY7 222 aa12.21□□□□□ -0.45
BRCA1-218ENST00000489037 J3QW42 95 aa12.21□□□□□ -0.45
BRCA1-218ENST00000489037 TIPRLO75663 272 aa12.21□□□□□ -0.45
BRCA1-218ENST00000489037 TFP02787 698 aa12.21□□□□□ -0.45
BRCA1-218ENST00000489037 HPXP02790 462 aa12.21□□□□□ -0.45
BRCA1-218ENST00000489037 HMGN1P05114 100 aa12.21□□□□□ -0.45
BRCA1-218ENST00000489037 OSMP13725 252 aa12.21□□□□□ -0.45
BRCA1-218ENST00000489037 ACHEP22303 614 aa12.21□□□□□ -0.45
BRCA1-218ENST00000489037 GIFP27352 417 aa12.21□□□□□ -0.45
BRCA1-218ENST00000489037 MPV17P39210 176 aa12.21□□□□□ -0.45
BRCA1-218ENST00000489037 GZMKP49863 264 aa12.21□□□□□ -0.45
BRCA1-218ENST00000489037 SLC25A1P53007 311 aa12.21□□□□□ -0.45
BRCA1-218ENST00000489037 HIST1H3AP68431 136 aa12.21□□□□□ -0.45
BRCA1-218ENST00000489037 MRPS11P82912 194 aaKnown RBP12.21□□□□□ -0.45
BRCA1-218ENST00000489037 CRMP1Q14194 572 aa12.21□□□□□ -0.45
BRCA1-218ENST00000489037 FAM209AQ5JX71 171 aa12.21□□□□□ -0.45
BRCA1-218ENST00000489037 HIST2H3PS2Q5TEC6 136 aa12.21□□□□□ -0.45
BRCA1-218ENST00000489037 CYB5R2Q6BCY4 276 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms