RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 IGF2-ASQ6U949 168 aa12.3□□□□□ -0.44
COPS7B-221ENST00000488111 MARCH3Q86UD3 253 aa12.3□□□□□ -0.44
COPS7B-221ENST00000488111 PUSL1Q8N0Z8 303 aaKnown RBP12.3□□□□□ -0.44
COPS7B-221ENST00000488111 PHOSPHO1Q8TCT1 267 aa12.3□□□□□ -0.44
COPS7B-221ENST00000488111 ADAMTS17Q8TE56 1095 aa12.3□□□□□ -0.44
COPS7B-221ENST00000488111 GFI1Q99684 422 aa12.3□□□□□ -0.44
COPS7B-221ENST00000488111 SMAD5Q99717 465 aaKnown RBP12.3□□□□□ -0.44
COPS7B-221ENST00000488111 DNAJB12Q9NXW2 375 aaKnown RBP12.3□□□□□ -0.44
COPS7B-221ENST00000488111 FOXJ3Q9UPW0 622 aa12.3□□□□□ -0.44
COPS7B-221ENST00000488111 C2orf72A6NCS6 295 aa12.29□□□□□ -0.44
COPS7B-221ENST00000488111 UNC119BA6NIH7 251 aa12.29□□□□□ -0.44
COPS7B-221ENST00000488111 RFPL4AA6NLU0 287 aa12.29□□□□□ -0.44
COPS7B-221ENST00000488111 RFPL4AL1F8VTS6 287 aa12.29□□□□□ -0.44
COPS7B-221ENST00000488111 ACOT7O00154 380 aa12.29□□□□□ -0.44
COPS7B-221ENST00000488111 OIP5O43482 229 aa12.29□□□□□ -0.44
COPS7B-221ENST00000488111 PVALBP20472 110 aaPredicted RBP12.29□□□□□ -0.44
COPS7B-221ENST00000488111 NOS3P29474 1203 aa12.29□□□□□ -0.44
COPS7B-221ENST00000488111 GDI2P50395 445 aaKnown RBP12.29□□□□□ -0.44
COPS7B-221ENST00000488111 CDK5R1Q15078 307 aa12.29□□□□□ -0.44
COPS7B-221ENST00000488111 TSC22D1Q15714 1073 aa12.29□□□□□ -0.44
COPS7B-221ENST00000488111 CCDC36Q8IYA8 594 aa12.29□□□□□ -0.44
COPS7B-221ENST00000488111 ARMC10Q8N2F6 343 aa12.29□□□□□ -0.44
COPS7B-221ENST00000488111 LNX2Q8N448 690 aa12.29□□□□□ -0.44
COPS7B-221ENST00000488111 SMPDL3BQ92485 455 aa12.29□□□□□ -0.44
COPS7B-221ENST00000488111 SMIM19Q96E16 107 aa12.29□□□□□ -0.44
COPS7B-221ENST00000488111 PIGMQ9H3S5 423 aa12.29□□□□□ -0.44
COPS7B-221ENST00000488111 CMC2Q9NRP2 79 aa12.29□□□□□ -0.44
COPS7B-221ENST00000488111 DISC1C4P0D8 188 aa12.29□□□□□ -0.44
COPS7B-221ENST00000488111 GPR31O00270 319 aa12.29□□□□□ -0.44
COPS7B-221ENST00000488111 PTNP21246 168 aa12.29□□□□□ -0.44
COPS7B-221ENST00000488111 SLC2A5P22732 501 aa12.29□□□□□ -0.44
COPS7B-221ENST00000488111 ACTC1P68032 377 aa12.29□□□□□ -0.44
COPS7B-221ENST00000488111 ACTA1P68133 377 aa12.29□□□□□ -0.44
COPS7B-221ENST00000488111 SORDQ00796 357 aa12.29□□□□□ -0.44
COPS7B-221ENST00000488111 FAM74A1Q5RGS3 127 aa12.29□□□□□ -0.44
COPS7B-221ENST00000488111 ELP2Q6IA86 826 aa12.29□□□□□ -0.44
COPS7B-221ENST00000488111 TMEM88Q6PEY1 159 aa12.29□□□□□ -0.44
COPS7B-221ENST00000488111 ZNF613Q6PF04 617 aa12.29□□□□□ -0.44
COPS7B-221ENST00000488111 CBLN3Q6UW01 205 aa12.29□□□□□ -0.44
COPS7B-221ENST00000488111 UNQ9370/PRO34162Q6UXP9 181 aa12.29□□□□□ -0.44
COPS7B-221ENST00000488111 DNM1P46Q6ZS02 220 aa12.29□□□□□ -0.44
COPS7B-221ENST00000488111 SSX6Q7RTT6 188 aa12.29□□□□□ -0.44
COPS7B-221ENST00000488111 RPS19BP1Q86WX3 136 aaKnown RBP12.29□□□□□ -0.44
COPS7B-221ENST00000488111 SVBPQ8N300 66 aa12.29□□□□□ -0.44
COPS7B-221ENST00000488111 SFT2D1Q8WV19 159 aa12.29□□□□□ -0.44
COPS7B-221ENST00000488111 TSNAXQ99598 290 aaKnown RBP12.29□□□□□ -0.44
COPS7B-221ENST00000488111 SCNM1Q9BWG6 230 aa12.29□□□□□ -0.44
COPS7B-221ENST00000488111 TRAV14DV4A0A0A6YYC5 116 aa12.28□□□□□ -0.44
COPS7B-221ENST00000488111 TMEM272A0A1B0GTI8 110 aa12.28□□□□□ -0.44
COPS7B-221ENST00000488111 IFITM5A6NNB3 132 aa12.28□□□□□ -0.44
COPS7B-221ENST00000488111 TMEM127O75204 238 aa12.28□□□□□ -0.44
COPS7B-221ENST00000488111 SNAPINO95295 136 aa12.28□□□□□ -0.44
COPS7B-221ENST00000488111 CD1AP06126 327 aa12.28□□□□□ -0.44
COPS7B-221ENST00000488111 WT1P19544 449 aaPredicted RBP12.28□□□□□ -0.44
COPS7B-221ENST00000488111 HTR2AP28223 471 aa12.28□□□□□ -0.44
COPS7B-221ENST00000488111 HES5Q5TA89 166 aa12.28□□□□□ -0.44
COPS7B-221ENST00000488111 ZNF600Q6ZNG1 722 aa12.28□□□□□ -0.44
COPS7B-221ENST00000488111 OR52L1Q8NGH7 329 aa12.28□□□□□ -0.44
COPS7B-221ENST00000488111 SLC22A8Q8TCC7 542 aa12.28□□□□□ -0.44
COPS7B-221ENST00000488111 SLC25A28Q96A46 364 aa12.28□□□□□ -0.44
COPS7B-221ENST00000488111 THOC3Q96J01 351 aaKnown RBP12.28□□□□□ -0.44
COPS7B-221ENST00000488111 KLHDC3Q9BQ90 382 aa12.28□□□□□ -0.44
COPS7B-221ENST00000488111 TBL1XR1Q9BZK7 514 aa12.28□□□□□ -0.44
COPS7B-221ENST00000488111 ENKD1Q9H0I2 346 aa12.28□□□□□ -0.44
COPS7B-221ENST00000488111 KRCC1Q9NPI7 259 aaPredicted RBP12.28□□□□□ -0.44
COPS7B-221ENST00000488111 HAO2Q9NYQ3 351 aa12.28□□□□□ -0.44
COPS7B-221ENST00000488111 TMEM218A2RU14 115 aa12.28□□□□□ -0.44
COPS7B-221ENST00000488111 RAB19A4D1S5 217 aa12.28□□□□□ -0.44
COPS7B-221ENST00000488111 NKX2-8O15522 239 aa12.28□□□□□ -0.44
COPS7B-221ENST00000488111 GLAP06280 429 aa12.28□□□□□ -0.44
COPS7B-221ENST00000488111 ACHEP22303 614 aa12.28□□□□□ -0.44
COPS7B-221ENST00000488111 CBFBQ13951 182 aa12.28□□□□□ -0.44
COPS7B-221ENST00000488111 RBMS2Q15434 407 aaKnown RBP12.28□□□□□ -0.44
COPS7B-221ENST00000488111 FCRLAQ7L513 359 aa12.28□□□□□ -0.44
COPS7B-221ENST00000488111 SERPINA12Q8IW75 414 aa12.28□□□□□ -0.44
COPS7B-221ENST00000488111 MUC20Q8N307 709 aaPredicted RBP12.28□□□□□ -0.44
COPS7B-221ENST00000488111 TMEM185AQ8NFB2 350 aa12.28□□□□□ -0.44
COPS7B-221ENST00000488111 OR10G3Q8NGC4 313 aa12.28□□□□□ -0.44
COPS7B-221ENST00000488111 GRHL3Q8TE85 626 aa12.28□□□□□ -0.44
COPS7B-221ENST00000488111 GLYATL2Q8WU03 294 aa12.28□□□□□ -0.44
COPS7B-221ENST00000488111 OR14A2Q96R54 314 aa12.28□□□□□ -0.44
COPS7B-221ENST00000488111 OR51V1Q9H2C8 321 aa12.28□□□□□ -0.44
COPS7B-221ENST00000488111 A0A0D9SG52 128 aa12.27□□□□□ -0.44
COPS7B-221ENST00000488111 FMO6PO60774 539 aa12.27□□□□□ -0.44
COPS7B-221ENST00000488111 ACAA2P42765 397 aaKnown RBP12.27□□□□□ -0.44
COPS7B-221ENST00000488111 CCR4P51679 360 aa12.27□□□□□ -0.44
COPS7B-221ENST00000488111 CHAF1BQ13112 559 aa12.27□□□□□ -0.44
COPS7B-221ENST00000488111 OR1Q1Q15612 314 aa12.27□□□□□ -0.44
COPS7B-221ENST00000488111 DCAF10Q5QP82 559 aa12.27□□□□□ -0.44
COPS7B-221ENST00000488111 TMEM69Q5SWH9 247 aa12.27□□□□□ -0.44
COPS7B-221ENST00000488111 FNDC7Q5VTL7 733 aa12.27□□□□□ -0.44
COPS7B-221ENST00000488111 PGAP1Q75T13 922 aa12.27□□□□□ -0.44
COPS7B-221ENST00000488111 RANBP3LQ86VV4 465 aaPredicted RBP12.27□□□□□ -0.44
COPS7B-221ENST00000488111 C12orf45Q8N5I9 185 aaPredicted RBP12.27□□□□□ -0.44
COPS7B-221ENST00000488111 RAB40AQ8WXH6 277 aa12.27□□□□□ -0.44
COPS7B-221ENST00000488111 PHYHIPQ92561 330 aa12.27□□□□□ -0.44
COPS7B-221ENST00000488111 S100A16Q96FQ6 103 aaKnown RBP12.27□□□□□ -0.44
COPS7B-221ENST00000488111 HS6ST2Q96MM7 605 aa12.27□□□□□ -0.44
COPS7B-221ENST00000488111 AKAP13Q12802 2813 aa12.27□□□□□ -0.45
COPS7B-221ENST00000488111 FADS1O60427 444 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms