RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 SPRR5A0A1B0GTR4 108 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 TMEM223A0PJW6 202 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 H7C1H1 209 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 H7C417 338 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 SGK1O00141 431 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 RBFOX2O43251 390 aaKnown RBP eCLIP1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 B4GALT5O43286 388 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 DNAJB6O75190 326 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 CDH16O75309 829 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 CCNKO75909 580 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 SLC25A14O95258 325 aaPredicted RBP1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 OXTP01178 125 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 KRT14P02533 472 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 ARG1P05089 322 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 CISD3P0C7P0 127 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 ZNF806P0C7X5 589 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 LINC00869P0C866 280 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 CCNB1P14635 433 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 MUC1P15941 1255 aaPredicted RBP1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 PSMC3P17980 439 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 TCN2P20062 427 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 F2RP25116 425 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 RRM2P31350 389 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 STXBP1P61764 594 aaKnown RBP1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 ARG2P78540 354 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 LY6EQ16553 131 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 UBE2SQ16763 222 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 SMUG1Q53HV7 270 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 C5orf47Q569G3 176 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 FAM78AQ5JUQ0 283 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 METAP1DQ6UB28 335 aaPredicted RBP1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 C12orf54Q6X4T0 127 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 TMEM150AQ86TG1 271 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 OFCC1Q8IZS5 231 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 ZNF561Q8N587 486 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 METTL13Q8N6R0 699 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 NPWQ8N729 165 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 C11orf72Q8NBR9 251 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 CCDC148Q8NFR7 591 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 PIFOQ8TCI5 191 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 GALNT14Q96FL9 552 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 ZNF317Q96PQ6 595 aaPredicted RBP1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 TGS1Q96RS0 853 aaKnown RBP1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 RSPO3Q9BXY4 272 aaPredicted RBP1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 TMEM165Q9HC07 324 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 ACP6Q9NPH0 428 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 SAMSN1Q9NSI8 373 aaKnown RBP1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 MTCH1Q9NZJ7 389 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 CCDC59Q9P031 241 aaKnown RBP1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 GCNT4Q9P109 453 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 ZNRD1Q9P1U0 126 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 MTFP1Q9UDX5 166 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 TSPOAP1O95153 1857 aa1.6□□□□□ -2.15
R3HDM1-219ENST00000488035 INSRP06213 1382 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 TUBGCP6Q96RT7 1819 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 IGLV1-50A0A075B6I6 118 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 IGKV1-8A0A0C4DH67 115 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 C5orf63A6NC05 138 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 TMEM150BA6NC51 233 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 NDUFAB1O14561 156 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 SLC9A3R1O14745 358 aaPredicted RBP1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 NVLO15381 856 aaKnown RBP1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 WBP4O75554 376 aaKnown RBP1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 CD160O95971 181 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 CT45A6P0DMU7 189 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 CT45A5P0DMU8 189 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 CT45A7P0DMV0 189 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 ATF6P18850 670 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 CSNK2A2P19784 350 aaPredicted RBP1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 NPY1RP25929 384 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 U2AF2P26368 475 aaKnown RBP eCLIP1.59□□□□□ -2.152e-7■□□□□ 10.9
R3HDM1-219ENST00000488035 GTF2E2P29084 291 aaKnown RBP1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 OTX1P32242 354 aaPredicted RBP1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 SSTR5P35346 364 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 CX3CR1P49238 355 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 PRRX1P54821 245 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 PPP1CBP62140 327 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 TRAM2Q15035 370 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 RCN1Q15293 331 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 HSDL1Q3SXM5 330 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 ORMDL2Q53FV1 153 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 CT45A1Q5HYN5 189 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 THEM4Q5T1C6 240 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 UBE2UQ5VVX9 321 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 FBXW9Q5XUX1 488 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 CMC1Q7Z7K0 106 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 H1FOOQ8IZA3 346 aaPredicted RBP1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 ARRDC1Q8N5I2 433 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 ZNF615Q8N8J6 731 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 OR52E2Q8NGJ4 325 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 OR6N1Q8NGY5 312 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 OR5K2Q8NHB8 316 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 CT45A3Q8NHU0 189 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 ZNF461Q8TAF7 563 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 CIRBP-AS1Q8TBR5 109 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 NTAN1Q96AB6 310 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 FLYWCH2Q96CP2 140 aaKnown RBP1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 SEH1LQ96EE3 360 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 ZNF488Q96MN9 340 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 TIMM17AQ99595 171 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms