RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 SGPP2Q8IWX5 399 aa10.65□□□□□ -0.7
TRA2B-214ENST00000487615 SPAG16Q8N0X2 631 aa10.65□□□□□ -0.7
TRA2B-214ENST00000487615 PLPP5Q8NEB5 264 aa10.65□□□□□ -0.7
TRA2B-214ENST00000487615 MARVELD1Q9BSK0 173 aa10.65□□□□□ -0.7
TRA2B-214ENST00000487615 SLC5A7Q9GZV3 580 aa10.65□□□□□ -0.7
TRA2B-214ENST00000487615 TRIM64BA6NI03 449 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 XRCC3O43542 346 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 PMS2P2O95744 297 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 GPANK1O95872 356 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 UBBP0CG47 229 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 MAGEB1P43366 347 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 NANOS1Q8WY41 292 aaKnown RBP10.64□□□□□ -0.71
TRA2B-214ENST00000487615 DDOQ99489 341 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 UTP23Q9BRU9 249 aaKnown RBP10.64□□□□□ -0.71
TRA2B-214ENST00000487615 EHFQ9NZC4 300 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 A6NL46 340 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 ZNF35P13682 527 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 BLVRBP30043 206 aaPredicted RBP10.64□□□□□ -0.71
TRA2B-214ENST00000487615 ATP1B3P54709 279 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 TAS2R46P59540 309 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 DUSP18Q8NEJ0 188 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 RNF128Q8TEB7 428 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 FAM86C1Q9NVL1 165 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 PARPBPQ9NWS1 579 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 FLVCR2Q9UPI3 526 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 SLC22A23A1A5C7 686 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 TMEM235A6NFC5 223 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 SHISA8B8ZZ34 492 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 TSPAN9O75954 239 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 CTLA4P16410 223 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 MYBPHQ13203 477 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 MESTQ5EB52 335 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 PRSS42Q7Z5A4 293 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 MRGPREQ86SM8 312 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 OR10G3Q8NGC4 313 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 OR4D9Q8NGE8 314 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 DCUN1D4Q92564 292 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 METTL9Q9H1A3 318 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 MYOTQ9UBF9 498 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 MRM2Q9UI43 246 aaKnown RBP10.64□□□□□ -0.71
TRA2B-214ENST00000487615 A0A1B0GTH9 108 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 TMEM221A6NGB7 291 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 F10P00742 488 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 WNT1P04628 370 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 GAAP10253 952 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 PRKACBP22694 351 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 CPT2P23786 658 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 FMODQ06828 376 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 NUBPLQ8TB37 319 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 C17orf50Q8WW18 174 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 C11orf40Q8WZ69 217 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 RNF170Q96K19 258 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 GDF15Q99988 308 aa10.64□□□□□ -0.71
TRA2B-214ENST00000487615 SIRT4Q9Y6E7 314 aaPredicted RBP10.64□□□□□ -0.71
TRA2B-214ENST00000487615 A0A1B0GUH1 482 aa10.63□□□□□ -0.71
TRA2B-214ENST00000487615 FXYD4P59646 89 aa10.63□□□□□ -0.71
TRA2B-214ENST00000487615 UBE2NP61088 152 aaKnown RBP10.63□□□□□ -0.71
TRA2B-214ENST00000487615 PLCXD3Q63HM9 321 aa10.63□□□□□ -0.71
TRA2B-214ENST00000487615 PWWP2BQ6NUJ5 590 aa10.63□□□□□ -0.71
TRA2B-214ENST00000487615 GABRG1Q8N1C3 465 aa10.63□□□□□ -0.71
TRA2B-214ENST00000487615 PIGCQ92535 297 aa10.63□□□□□ -0.71
TRA2B-214ENST00000487615 UPRTQ96BW1 309 aa10.63□□□□□ -0.71
TRA2B-214ENST00000487615 CLCC1Q96S66 551 aa10.63□□□□□ -0.71
TRA2B-214ENST00000487615 VRK1Q99986 396 aaPredicted RBP10.63□□□□□ -0.71
TRA2B-214ENST00000487615 A0A087WZY1 265 aa10.63□□□□□ -0.71
TRA2B-214ENST00000487615 PLPP3O14495 311 aa10.63□□□□□ -0.71
TRA2B-214ENST00000487615 OIP5O43482 229 aa10.63□□□□□ -0.71
TRA2B-214ENST00000487615 BPNT1O95861 308 aa10.63□□□□□ -0.71
TRA2B-214ENST00000487615 CTSBP07858 339 aa10.63□□□□□ -0.71
TRA2B-214ENST00000487615 GNRHRP30968 328 aa10.63□□□□□ -0.71
TRA2B-214ENST00000487615 IL11RAQ14626 422 aa10.63□□□□□ -0.71
TRA2B-214ENST00000487615 GNMTQ14749 295 aa10.63□□□□□ -0.71
TRA2B-214ENST00000487615 OR10K2Q6IF99 312 aa10.63□□□□□ -0.71
TRA2B-214ENST00000487615 CD200R1LQ6Q8B3 271 aa10.63□□□□□ -0.71
TRA2B-214ENST00000487615 KANSL1Q7Z3B3 1105 aa10.63□□□□□ -0.71
TRA2B-214ENST00000487615 YRDCQ86U90 279 aaKnown RBP10.63□□□□□ -0.71
TRA2B-214ENST00000487615 SGCZQ96LD1 299 aa10.63□□□□□ -0.71
TRA2B-214ENST00000487615 PBOV1Q9GZY1 135 aa10.63□□□□□ -0.71
TRA2B-214ENST00000487615 PPA2Q9H2U2 334 aa10.63□□□□□ -0.71
TRA2B-214ENST00000487615 C12orf4Q9NQ89 552 aa10.63□□□□□ -0.71
TRA2B-214ENST00000487615 GPR84Q9NQS5 396 aa10.63□□□□□ -0.71
TRA2B-214ENST00000487615 GDF2Q9UK05 429 aaPredicted RBP10.63□□□□□ -0.71
TRA2B-214ENST00000487615 ZDBF2Q9HCK1 2354 aa10.63□□□□□ -0.71
TRA2B-214ENST00000487615 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.63□□□□□ -0.71
TRA2B-214ENST00000487615 BORCS7-ASMTA0A0B4J1R7 106 aa10.63□□□□□ -0.71
TRA2B-214ENST00000487615 PLA2G10O15496 165 aa10.63□□□□□ -0.71
TRA2B-214ENST00000487615 GIPP09681 153 aaPredicted RBP10.63□□□□□ -0.71
TRA2B-214ENST00000487615 MGAT2Q10469 447 aa10.63□□□□□ -0.71
TRA2B-214ENST00000487615 C6orf15Q6UXA7 325 aaPredicted RBP10.63□□□□□ -0.71
TRA2B-214ENST00000487615 SULF2Q8IWU5 870 aa10.63□□□□□ -0.71
TRA2B-214ENST00000487615 HSD17B8Q92506 261 aa10.63□□□□□ -0.71
TRA2B-214ENST00000487615 ZNF768Q9H5H4 540 aaKnown RBP10.63□□□□□ -0.71
TRA2B-214ENST00000487615 PLSCR3Q9NRY6 295 aa10.63□□□□□ -0.71
TRA2B-214ENST00000487615 OR5V1Q9UGF6 321 aa10.63□□□□□ -0.71
TRA2B-214ENST00000487615 FOXJ3Q9UPW0 622 aa10.63□□□□□ -0.71
TRA2B-214ENST00000487615 PTPRZ1P23471 2315 aaPredicted RBP10.62□□□□□ -0.71
TRA2B-214ENST00000487615 STK17BO94768 372 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 ZIC2O95409 532 aaPredicted RBP10.62□□□□□ -0.71
TRA2B-214ENST00000487615 RAD52P43351 418 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 ARG2P78540 354 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms