RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 OR1F12Q8NHA8 337 aa15.66■□□□□ 0.1
PRPF40A-209ENST00000486100 SPATA3Q8NHX4 192 aa15.66■□□□□ 0.1
PRPF40A-209ENST00000486100 SAMD8Q96LT4 415 aa15.66■□□□□ 0.1
PRPF40A-209ENST00000486100 DIRC2Q96SL1 478 aa15.66■□□□□ 0.1
PRPF40A-209ENST00000486100 NMNAT3Q96T66 252 aa15.66■□□□□ 0.1
PRPF40A-209ENST00000486100 IFT27Q9BW83 186 aa15.66■□□□□ 0.1
PRPF40A-209ENST00000486100 SRA1Q9HD15 236 aaKnown RBP15.66■□□□□ 0.1
PRPF40A-209ENST00000486100 TREM2Q9NZC2 230 aa15.66■□□□□ 0.1
PRPF40A-209ENST00000486100 TMEFF2Q9UIK5 374 aaPredicted RBP15.66■□□□□ 0.1
PRPF40A-209ENST00000486100 ZDHHC8Q9ULC8 765 aa15.66■□□□□ 0.1
PRPF40A-209ENST00000486100 GRIP1Q9Y3R0 1128 aa15.66■□□□□ 0.1
PRPF40A-209ENST00000486100 IGLV1-36A0A0B4J1U3 117 aa15.65■□□□□ 0.1
PRPF40A-209ENST00000486100 OR6C6A6NF89 314 aa15.65■□□□□ 0.1
PRPF40A-209ENST00000486100 ZSCAN5BA6NJL1 495 aa15.65■□□□□ 0.1
PRPF40A-209ENST00000486100 RER1O15258 196 aa15.65■□□□□ 0.1
PRPF40A-209ENST00000486100 IDH3BO43837 385 aa15.65■□□□□ 0.1
PRPF40A-209ENST00000486100 RENP00797 406 aa15.65■□□□□ 0.1
PRPF40A-209ENST00000486100 HIST1H1CP16403 213 aaKnown RBP15.65■□□□□ 0.1
PRPF40A-209ENST00000486100 GSTM3P21266 225 aa15.65■□□□□ 0.1
PRPF40A-209ENST00000486100 ATP6V1B2P21281 511 aa15.65■□□□□ 0.1
PRPF40A-209ENST00000486100 CENPAP49450 140 aa15.65■□□□□ 0.1
PRPF40A-209ENST00000486100 LMO4P61968 165 aa15.65■□□□□ 0.1
PRPF40A-209ENST00000486100 HFEQ30201 348 aa15.65■□□□□ 0.1
PRPF40A-209ENST00000486100 PGBD2Q6P3X8 592 aa15.65■□□□□ 0.1
PRPF40A-209ENST00000486100 OR6V1Q8N148 313 aa15.65■□□□□ 0.1
PRPF40A-209ENST00000486100 LINC00471Q8N535 108 aa15.65■□□□□ 0.1
PRPF40A-209ENST00000486100 GJC3Q8NFK1 279 aa15.65■□□□□ 0.1
PRPF40A-209ENST00000486100 OR4K13Q8NH42 304 aa15.65■□□□□ 0.1
PRPF40A-209ENST00000486100 ELMOD3Q96FG2 381 aa15.65■□□□□ 0.1
PRPF40A-209ENST00000486100 COG8Q96MW5 612 aa15.65■□□□□ 0.1
PRPF40A-209ENST00000486100 TRIM15Q9C019 465 aa15.65■□□□□ 0.1
PRPF40A-209ENST00000486100 EGLN1Q9GZT9 426 aa15.65■□□□□ 0.1
PRPF40A-209ENST00000486100 ATPIF1Q9UII2 106 aa15.65■□□□□ 0.1
PRPF40A-209ENST00000486100 STARD10Q9Y365 291 aa15.65■□□□□ 0.1
PRPF40A-209ENST00000486100 LYVE1Q9Y5Y7 322 aa15.65■□□□□ 0.1
PRPF40A-209ENST00000486100 MALRD1Q5VYJ5 2156 aa15.65■□□□□ 0.1
PRPF40A-209ENST00000486100 ATRQ13535 2644 aa15.64■□□□□ 0.1
PRPF40A-209ENST00000486100 CUBNO60494 3623 aa15.64■□□□□ 0.1
PRPF40A-209ENST00000486100 FAM157AC9JC47 383 aa15.64■□□□□ 0.09
PRPF40A-209ENST00000486100 TNFRSF11BO00300 401 aa15.64■□□□□ 0.09
PRPF40A-209ENST00000486100 TIMM8AO60220 97 aaPredicted RBP15.64■□□□□ 0.09
PRPF40A-209ENST00000486100 GPANK1O95872 356 aa15.64■□□□□ 0.09
PRPF40A-209ENST00000486100 GAAP10253 952 aa15.64■□□□□ 0.09
PRPF40A-209ENST00000486100 CALB2P22676 271 aa15.64■□□□□ 0.09
PRPF40A-209ENST00000486100 NOS3P29474 1203 aa15.64■□□□□ 0.09
PRPF40A-209ENST00000486100 MAGEA2P43356 314 aa15.64■□□□□ 0.09
PRPF40A-209ENST00000486100 HIST1H3AP68431 136 aa15.64■□□□□ 0.09
PRPF40A-209ENST00000486100 TRIM25Q14258 630 aaKnown RBP15.64■□□□□ 0.09
PRPF40A-209ENST00000486100 ZMAT1Q5H9K5 638 aa15.64■□□□□ 0.09
PRPF40A-209ENST00000486100 HIST2H3PS2Q5TEC6 136 aa15.64■□□□□ 0.09
PRPF40A-209ENST00000486100 ZNF620Q6ZNG0 422 aa15.64■□□□□ 0.09
PRPF40A-209ENST00000486100 HIST2H3AQ71DI3 136 aa15.64■□□□□ 0.09
PRPF40A-209ENST00000486100 CCDC197Q8NCU1 140 aa15.64■□□□□ 0.09
PRPF40A-209ENST00000486100 SLC7A6Q92536 515 aa15.64■□□□□ 0.09
PRPF40A-209ENST00000486100 PTP4A1Q93096 173 aa15.64■□□□□ 0.09
PRPF40A-209ENST00000486100 DCLRE1CQ96SD1 692 aaKnown RBP15.64■□□□□ 0.09
PRPF40A-209ENST00000486100 MUC13Q9H3R2 512 aa15.64■□□□□ 0.09
PRPF40A-209ENST00000486100 POFUT1Q9H488 388 aa15.64■□□□□ 0.09
PRPF40A-209ENST00000486100 POLR1DQ9Y2S0 133 aa15.64■□□□□ 0.09
PRPF40A-209ENST00000486100 SVEP1Q4LDE5 3571 aa15.64■□□□□ 0.09
PRPF40A-209ENST00000486100 TCRBV5S2A0A599 114 aa15.63■□□□□ 0.09
PRPF40A-209ENST00000486100 RNF212BA8MTL3 300 aa15.63■□□□□ 0.09
PRPF40A-209ENST00000486100 CLDN25C9JDP6 229 aa15.63■□□□□ 0.09
PRPF40A-209ENST00000486100 CD55P08174 381 aa15.63■□□□□ 0.09
PRPF40A-209ENST00000486100 T-ENOLP0DO92 83 aa15.63■□□□□ 0.09
PRPF40A-209ENST00000486100 KITLGP21583 273 aa15.63■□□□□ 0.09
PRPF40A-209ENST00000486100 PCMT1P22061 227 aa15.63■□□□□ 0.09
PRPF40A-209ENST00000486100 MVKQ03426 396 aa15.63■□□□□ 0.09
PRPF40A-209ENST00000486100 CDK5R2Q13319 367 aa15.63■□□□□ 0.09
PRPF40A-209ENST00000486100 MEP1BQ16820 701 aa15.63■□□□□ 0.09
PRPF40A-209ENST00000486100 AVPI1Q5T686 147 aa15.63■□□□□ 0.09
PRPF40A-209ENST00000486100 RINLQ6ZS11 566 aa15.63■□□□□ 0.09
PRPF40A-209ENST00000486100 ZBTB46Q86UZ6 589 aa15.63■□□□□ 0.09
PRPF40A-209ENST00000486100 GLCCI1Q86VQ1 547 aa15.63■□□□□ 0.09
PRPF40A-209ENST00000486100 DHFR2Q86XF0 187 aa15.63■□□□□ 0.09
PRPF40A-209ENST00000486100 TMEM158Q8WZ71 300 aa15.63■□□□□ 0.09
PRPF40A-209ENST00000486100 CCL17Q92583 94 aa15.63■□□□□ 0.09
PRPF40A-209ENST00000486100 RAB1CQ92928 201 aa15.63■□□□□ 0.09
PRPF40A-209ENST00000486100 HAVCR1Q96D42 359 aa15.63■□□□□ 0.09
PRPF40A-209ENST00000486100 CMBLQ96DG6 245 aa15.63■□□□□ 0.09
PRPF40A-209ENST00000486100 TIMD4Q96H15 378 aa15.63■□□□□ 0.09
PRPF40A-209ENST00000486100 MAGIXQ9H6Y5 334 aa15.63■□□□□ 0.09
PRPF40A-209ENST00000486100 MSL2Q9HCI7 577 aa15.63■□□□□ 0.09
PRPF40A-209ENST00000486100 RPRD1BQ9NQG5 326 aaKnown RBP15.63■□□□□ 0.09
PRPF40A-209ENST00000486100 FAM53CQ9NYF3 392 aa15.63■□□□□ 0.09
PRPF40A-209ENST00000486100 PURGQ9UJV8 347 aaKnown RBP15.63■□□□□ 0.09
PRPF40A-209ENST00000486100 LHFPL6Q9Y693 200 aa15.63■□□□□ 0.09
PRPF40A-209ENST00000486100 CACNG2Q9Y698 323 aa15.63■□□□□ 0.09
PRPF40A-209ENST00000486100 OR6C68A6NDL8 312 aa15.62■□□□□ 0.09
PRPF40A-209ENST00000486100 J3QW42 95 aa15.62■□□□□ 0.09
PRPF40A-209ENST00000486100 PHF1O43189 567 aaPredicted RBP15.62■□□□□ 0.09
PRPF40A-209ENST00000486100 UBOX5O94941 541 aa15.62■□□□□ 0.09
PRPF40A-209ENST00000486100 GASTP01350 101 aa15.62■□□□□ 0.09
PRPF40A-209ENST00000486100 MSMBP08118 114 aa15.62■□□□□ 0.09
PRPF40A-209ENST00000486100 DBHP09172 617 aa15.62■□□□□ 0.09
PRPF40A-209ENST00000486100 ANPEPP15144 967 aa15.62■□□□□ 0.09
PRPF40A-209ENST00000486100 RGS6P49758 472 aa15.62■□□□□ 0.09
PRPF40A-209ENST00000486100 MS4A2Q01362 244 aa15.62■□□□□ 0.09
PRPF40A-209ENST00000486100 COX10Q12887 443 aa15.62■□□□□ 0.09
PRPF40A-209ENST00000486100 SLC36A3Q495N2 470 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms