RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 MARS2Q96GW9 593 aaKnown RBP4.9□□□□□ -1.63
CUX1-208ENST00000485792 C18orf12Q96KH6 178 aa4.9□□□□□ -1.63
CUX1-208ENST00000485792 ZNF570Q96NI8 536 aa4.9□□□□□ -1.63
CUX1-208ENST00000485792 NIPSNAP1Q9BPW8 284 aa4.9□□□□□ -1.63
CUX1-208ENST00000485792 CHID1Q9BWS9 393 aa4.9□□□□□ -1.63
CUX1-208ENST00000485792 OR2H1Q9GZK4 316 aa4.9□□□□□ -1.63
CUX1-208ENST00000485792 NUAK2Q9H093 628 aa4.9□□□□□ -1.63
CUX1-208ENST00000485792 EGLN3Q9H6Z9 239 aa4.9□□□□□ -1.63
CUX1-208ENST00000485792 MARCH7Q9H992 704 aa4.9□□□□□ -1.63
CUX1-208ENST00000485792 TUBG2Q9NRH3 451 aa4.9□□□□□ -1.63
CUX1-208ENST00000485792 GRHPRQ9UBQ7 328 aa4.9□□□□□ -1.63
CUX1-208ENST00000485792 B9D1Q9UPM9 204 aa4.9□□□□□ -1.63
CUX1-208ENST00000485792 IER3IP1Q9Y5U9 82 aa4.9□□□□□ -1.63
CUX1-208ENST00000485792 FKBP7Q9Y680 259 aa4.9□□□□□ -1.63
CUX1-208ENST00000485792 LHFPL6Q9Y693 200 aa4.9□□□□□ -1.63
CUX1-208ENST00000485792 CDH10Q9Y6N8 788 aa4.9□□□□□ -1.63
CUX1-208ENST00000485792 COL6A5A8TX70 2615 aa4.9□□□□□ -1.63
CUX1-208ENST00000485792 ANK2Q01484 3957 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 FBN1P35555 2871 aaKnown RBP4.89□□□□□ -1.63
CUX1-208ENST00000485792 IGHV4-30-2A0A087WSY4 118 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 H3BSA7 217 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 M0R129 80 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 SYNGR3O43761 229 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 OR10H3O60404 316 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 PTHP01270 115 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 TFP02787 698 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 INHBBP09529 407 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 OR4A8P0C604 315 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 CLUP10909 449 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 GSTM3P21266 225 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 APEX1P27695 318 aaKnown RBP4.89□□□□□ -1.63
CUX1-208ENST00000485792 EPHA2P29317 976 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 CRABP1P29762 137 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 SLC6A6P31641 620 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 IFNGR2P38484 337 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 RPS27P42677 84 aaKnown RBP4.89□□□□□ -1.63
CUX1-208ENST00000485792 RASSF2P50749 326 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 FABP6P51161 128 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 MMP15P51511 669 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 RPS6KA3P51812 740 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 ATP5J2P56134 94 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 PCBD1P61457 104 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 MRPS11P82912 194 aaKnown RBP4.89□□□□□ -1.63
CUX1-208ENST00000485792 IL1RL1Q01638 556 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 HSF2Q03933 536 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 CD47Q08722 323 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 TNK1Q13470 666 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 DAG1Q14118 895 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 FLOT2Q14254 428 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 MEP1BQ16820 701 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 ALKBH6Q3KRA9 238 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 KRTAP21-3Q3LHN1 58 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 CCDC92Q53HC0 331 aaPredicted RBP4.89□□□□□ -1.63
CUX1-208ENST00000485792 TEX30Q5JUR7 227 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 LINC01590Q5TEZ4 76 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 MBNL2Q5VZF2 373 aaKnown RBP4.89□□□□□ -1.63
CUX1-208ENST00000485792 FAHD1Q6P587 224 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 RHOUQ7L0Q8 258 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 BIVMQ86UB2 503 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 GLB1L2Q8IW92 636 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 FBXL14Q8N1E6 418 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 PARP8Q8N3A8 854 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 RFLNBQ8N5W9 214 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 SLC30A7Q8NEW0 376 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 C10orf105Q8TEF2 133 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 SLC7A6Q92536 515 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 PTP4A1Q93096 173 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 MISP3Q96FF7 219 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 C1orf159Q96HA4 380 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 SAMD8Q96LT4 415 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 Q96MF0 132 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 SORCS2Q96PQ0 1159 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 FEVQ99581 238 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 BDH2Q9BUT1 245 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 CACNG6Q9BXT2 260 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 MRPL37Q9BZE1 423 aaKnown RBP4.89□□□□□ -1.63
CUX1-208ENST00000485792 SYT4Q9H2B2 425 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 BARX1Q9HBU1 254 aaPredicted RBP4.89□□□□□ -1.63
CUX1-208ENST00000485792 EMC7Q9NPA0 242 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 KRCC1Q9NPI7 259 aaPredicted RBP4.89□□□□□ -1.63
CUX1-208ENST00000485792 PNRC2Q9NPJ4 139 aaKnown RBP4.89□□□□□ -1.63
CUX1-208ENST00000485792 TBCCD1Q9NVR7 557 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 MRPL22Q9NWU5 206 aaKnown RBP4.89□□□□□ -1.63
CUX1-208ENST00000485792 DCAF16Q9NXF7 216 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 NKIRAS2Q9NYR9 191 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 DNAJB9Q9UBS3 223 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 CYB5R1Q9UHQ9 305 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 TMCC3Q9ULS5 477 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 AURKCQ9UQB9 309 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 COA3Q9Y2R0 106 aaPredicted RBP4.89□□□□□ -1.63
CUX1-208ENST00000485792 TIMM10BQ9Y5J6 103 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 ATP23Q9Y6H3 246 aa4.89□□□□□ -1.63
CUX1-208ENST00000485792 H3BNX3 289 aa4.88□□□□□ -1.63
CUX1-208ENST00000485792 NDUFS8O00217 210 aa4.88□□□□□ -1.63
CUX1-208ENST00000485792 XKRYO14609 159 aa4.88□□□□□ -1.63
CUX1-208ENST00000485792 WNT9BO14905 357 aa4.88□□□□□ -1.63
CUX1-208ENST00000485792 SLC16A7O60669 478 aa4.88□□□□□ -1.63
CUX1-208ENST00000485792 FKBP6O75344 327 aa4.88□□□□□ -1.63
CUX1-208ENST00000485792 KHDRBS3O75525 346 aaKnown RBP4.88□□□□□ -1.63
CUX1-208ENST00000485792 CCNB2O95067 398 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms