RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 ASB17Q8WXJ9 295 aa7.18□□□□□ -1.26
SF3A1-208ENST00000485618 NINJ1Q92982 152 aa7.18□□□□□ -1.26
SF3A1-208ENST00000485618 FBXO17Q96EF6 278 aa7.18□□□□□ -1.26
SF3A1-208ENST00000485618 IL4I1Q96RQ9 567 aa7.18□□□□□ -1.26
SF3A1-208ENST00000485618 TEAD3Q99594 435 aa7.18□□□□□ -1.26
SF3A1-208ENST00000485618 RASSF4Q9H2L5 321 aa7.18□□□□□ -1.26
SF3A1-208ENST00000485618 EMC7Q9NPA0 242 aa7.18□□□□□ -1.26
SF3A1-208ENST00000485618 CYB5R1Q9UHQ9 305 aa7.18□□□□□ -1.26
SF3A1-208ENST00000485618 CMAHPQ9Y471 501 aa7.18□□□□□ -1.26
SF3A1-208ENST00000485618 PMF1-BGLAPU3KQ54 211 aa7.18□□□□□ -1.26
SF3A1-208ENST00000485618 IGHV2OR16-5A0A0B4J2B6 119 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 IRGMA1A4Y4 181 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 H0YAE9 185 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 H3BSA7 217 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 PRKYO43930 277 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 ABHD16AO95870 558 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 RAF1P04049 648 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 GYPBP06028 91 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 ZNF35P13682 527 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 CD99P14209 185 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 APEX1P27695 318 aaKnown RBP7.17□□□□□ -1.26
SF3A1-208ENST00000485618 HTR1FP30939 366 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 GLRXP35754 106 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 SERPINF1P36955 418 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 EVX1P49640 407 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 UCP2P55851 309 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 TPTEP56180 551 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 SNRPGP62308 76 aaKnown RBP7.17□□□□□ -1.26
SF3A1-208ENST00000485618 SNRPD2P62316 118 aaKnown RBP7.17□□□□□ -1.26
SF3A1-208ENST00000485618 GRB2P62993 217 aaKnown RBP7.17□□□□□ -1.26
SF3A1-208ENST00000485618 MALLQ13021 153 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 APOFQ13790 326 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 ENDOGQ14249 297 aaKnown RBP7.17□□□□□ -1.26
SF3A1-208ENST00000485618 ZNF718Q3SXZ3 478 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 OGFRL1Q5TC84 451 aaPredicted RBP7.17□□□□□ -1.26
SF3A1-208ENST00000485618 LPCAT4Q643R3 524 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 ZNF774Q6NX45 483 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 UGT2A3Q6UWM9 527 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 SLC16A9Q7RTY1 509 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 ZNF511Q8NB15 262 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 OR6N2Q8NGY6 317 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 AKR7LQ8NHP1 331 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 SMAP2Q8WU79 429 aaPredicted RBP7.17□□□□□ -1.26
SF3A1-208ENST00000485618 CYGBQ8WWM9 190 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 NRGNQ92686 78 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 TRMT61AQ96FX7 289 aaKnown RBP7.17□□□□□ -1.26
SF3A1-208ENST00000485618 C4orf45Q96LM5 186 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 FOXN4Q96NZ1 517 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 CNN2Q99439 309 aaKnown RBP7.17□□□□□ -1.26
SF3A1-208ENST00000485618 CCL19Q99731 98 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 COQ7Q99807 217 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 SLC29A1Q99808 456 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 YIPF3Q9GZM5 350 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 ZNF442Q9H7R0 627 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 NIPAL2Q9H841 368 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 WDR76Q9H967 626 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 HINT3Q9NQE9 182 aaKnown RBP7.17□□□□□ -1.26
SF3A1-208ENST00000485618 CA10Q9NS85 328 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 TBCCD1Q9NVR7 557 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 FAM118AQ9NWS6 357 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 HAO2Q9NYQ3 351 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 NPAP1Q9NZP6 1156 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 LAMP5Q9UJQ1 280 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 GDF2Q9UK05 429 aaPredicted RBP7.17□□□□□ -1.26
SF3A1-208ENST00000485618 RPL36Q9Y3U8 105 aaKnown RBP7.17□□□□□ -1.26
SF3A1-208ENST00000485618 HSPE1-MOB4S4R3N1 261 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 HIVEP1P15822 2718 aa7.17□□□□□ -1.26
SF3A1-208ENST00000485618 MAP1AP78559 2803 aaPredicted RBP7.17□□□□□ -1.26
SF3A1-208ENST00000485618 AKAP6Q13023 2319 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 PLCE1Q9P212 2302 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 TVP23AA6NH52 213 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 SHISA9B4DS77 424 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 B9A039 149 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 ZNF878C9JN71 531 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 ATP6V1G2-DDX39BF2Z307 99 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 DCTN6O00399 190 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 ZNF254O75437 659 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 TFP02787 698 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 LCKP06239 509 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 LYNP07948 512 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 TACSTD2P09758 323 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 OR2T7P0C7T2 308 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 PEX2P28328 305 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 HSD11B1P28845 292 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 GCH1P30793 250 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 TTKP33981 857 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 POLR2IP36954 125 aaKnown RBP7.16□□□□□ -1.26
SF3A1-208ENST00000485618 LIPAP38571 399 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 MTNR1AP48039 350 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 CSNK2BP67870 215 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 ACTC1P68032 377 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 ACTA1P68133 377 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 HIST1H3AP68431 136 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 SNTB2Q13425 540 aaKnown RBP7.16□□□□□ -1.26
SF3A1-208ENST00000485618 MED21Q13503 144 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 EIF2B1Q14232 305 aaKnown RBP7.16□□□□□ -1.26
SF3A1-208ENST00000485618 OCLNQ16625 522 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 PCK2Q16822 640 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 HIST2H3PS2Q5TEC6 136 aa7.16□□□□□ -1.26
SF3A1-208ENST00000485618 AADACL4Q5VUY2 407 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms