RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 NOTCH1P46531 2555 aa10.97□□□□□ -0.65
HDAC6-227ENST00000485102 CMYA5Q8N3K9 4069 aa10.96□□□□□ -0.65
HDAC6-227ENST00000485102 CXCR6O00574 342 aa10.96□□□□□ -0.65
HDAC6-227ENST00000485102 NME4O00746 187 aa10.96□□□□□ -0.65
HDAC6-227ENST00000485102 SBK2P0C263 348 aa10.96□□□□□ -0.65
HDAC6-227ENST00000485102 T-ENOLP0DO92 83 aa10.96□□□□□ -0.65
HDAC6-227ENST00000485102 COX5BP10606 129 aa10.96□□□□□ -0.65
HDAC6-227ENST00000485102 TNFRSF1AP19438 455 aa10.96□□□□□ -0.65
HDAC6-227ENST00000485102 KITLGP21583 273 aa10.96□□□□□ -0.65
HDAC6-227ENST00000485102 GSK3BP49841 420 aa10.96□□□□□ -0.65
HDAC6-227ENST00000485102 ARHGDIAP52565 204 aa10.96□□□□□ -0.65
HDAC6-227ENST00000485102 TNFAIP6P98066 277 aaPredicted RBP10.96□□□□□ -0.65
HDAC6-227ENST00000485102 PSG7Q13046 419 aa10.96□□□□□ -0.65
HDAC6-227ENST00000485102 BAMBIQ13145 260 aa10.96□□□□□ -0.65
HDAC6-227ENST00000485102 SGCAQ16586 387 aa10.96□□□□□ -0.65
HDAC6-227ENST00000485102 NKAIN4Q8IVV8 208 aa10.96□□□□□ -0.65
HDAC6-227ENST00000485102 BCL6BQ8N143 479 aaPredicted RBP10.96□□□□□ -0.65
HDAC6-227ENST00000485102 AKR7LQ8NHP1 331 aa10.96□□□□□ -0.65
HDAC6-227ENST00000485102 VANGL1Q8TAA9 524 aaPredicted RBP10.96□□□□□ -0.65
HDAC6-227ENST00000485102 ABHD4Q8TB40 342 aa10.96□□□□□ -0.65
HDAC6-227ENST00000485102 GEMIN6Q8WXD5 167 aaKnown RBP10.96□□□□□ -0.65
HDAC6-227ENST00000485102 FAM162AQ96A26 154 aa10.96□□□□□ -0.65
HDAC6-227ENST00000485102 ASB9Q96DX5 294 aa10.96□□□□□ -0.65
HDAC6-227ENST00000485102 SGTBQ96EQ0 304 aa10.96□□□□□ -0.65
HDAC6-227ENST00000485102 C4orf45Q96LM5 186 aa10.96□□□□□ -0.65
HDAC6-227ENST00000485102 LRGUKQ96M69 825 aa10.96□□□□□ -0.65
HDAC6-227ENST00000485102 ZNF48Q96MX3 618 aaPredicted RBP10.96□□□□□ -0.65
HDAC6-227ENST00000485102 RBP7Q96R05 134 aa10.96□□□□□ -0.65
HDAC6-227ENST00000485102 SIGLEC11Q96RL6 698 aa10.96□□□□□ -0.65
HDAC6-227ENST00000485102 MSL2Q9HCI7 577 aa10.96□□□□□ -0.65
HDAC6-227ENST00000485102 MAN2C1Q9NTJ4 1040 aa10.96□□□□□ -0.65
HDAC6-227ENST00000485102 DCAF16Q9NXF7 216 aa10.96□□□□□ -0.65
HDAC6-227ENST00000485102 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.96□□□□□ -0.65
HDAC6-227ENST00000485102 IL19Q9UHD0 177 aa10.96□□□□□ -0.65
HDAC6-227ENST00000485102 EGFL7Q9UHF1 273 aa10.96□□□□□ -0.65
HDAC6-227ENST00000485102 IL20RAQ9UHF4 553 aa10.96□□□□□ -0.65
HDAC6-227ENST00000485102 HIF3AQ9Y2N7 669 aa10.96□□□□□ -0.65
HDAC6-227ENST00000485102 SNX13Q9Y5W8 968 aa10.96□□□□□ -0.65
HDAC6-227ENST00000485102 IFNL4K9M1U5 179 aa10.95□□□□□ -0.66
HDAC6-227ENST00000485102 OR5F1O95221 314 aa10.95□□□□□ -0.66
HDAC6-227ENST00000485102 FSTL3O95633 263 aa10.95□□□□□ -0.66
HDAC6-227ENST00000485102 TNFSF4P23510 183 aa10.95□□□□□ -0.66
HDAC6-227ENST00000485102 LAP3P28838 519 aa10.95□□□□□ -0.66
HDAC6-227ENST00000485102 BTG1P62324 171 aa10.95□□□□□ -0.66
HDAC6-227ENST00000485102 ERVK-25P63136 954 aa10.95□□□□□ -0.66
HDAC6-227ENST00000485102 SELENOWP63302 87 aa10.95□□□□□ -0.66
HDAC6-227ENST00000485102 PAX2Q02962 417 aa10.95□□□□□ -0.66
HDAC6-227ENST00000485102 SELPLGQ14242 412 aa10.95□□□□□ -0.66
HDAC6-227ENST00000485102 TRIM25Q14258 630 aaKnown RBP10.95□□□□□ -0.66
HDAC6-227ENST00000485102 LAPTM4AQ15012 233 aa10.95□□□□□ -0.66
HDAC6-227ENST00000485102 GLYATQ6IB77 296 aa10.95□□□□□ -0.66
HDAC6-227ENST00000485102 LEG1Q6P5S2 330 aa10.95□□□□□ -0.66
HDAC6-227ENST00000485102 NPEPL1Q8NDH3 523 aa10.95□□□□□ -0.66
HDAC6-227ENST00000485102 MOSPD2Q8NHP6 518 aa10.95□□□□□ -0.66
HDAC6-227ENST00000485102 PFN4Q8NHR9 129 aa10.95□□□□□ -0.66
HDAC6-227ENST00000485102 TMEM239Q8WW34 195 aa10.95□□□□□ -0.66
HDAC6-227ENST00000485102 NSMCE2Q96MF7 247 aa10.95□□□□□ -0.66
HDAC6-227ENST00000485102 RAB3IPQ96QF0 476 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-227ENST00000485102 THTPAQ9BU02 230 aa10.95□□□□□ -0.66
HDAC6-227ENST00000485102 MRI1Q9BV20 369 aa10.95□□□□□ -0.66
HDAC6-227ENST00000485102 PRDM13Q9H4Q3 707 aa10.95□□□□□ -0.66
HDAC6-227ENST00000485102 YY1AP1Q9H869 796 aa10.95□□□□□ -0.66
HDAC6-227ENST00000485102 C20orf141Q9NUB4 165 aa10.95□□□□□ -0.66
HDAC6-227ENST00000485102 ACTR3BQ9P1U1 418 aa10.95□□□□□ -0.66
HDAC6-227ENST00000485102 CD300AQ9UGN4 299 aa10.95□□□□□ -0.66
HDAC6-227ENST00000485102 RIMS3Q9UJD0 308 aa10.95□□□□□ -0.66
HDAC6-227ENST00000485102 NDRG4Q9ULP0 352 aaKnown RBP10.95□□□□□ -0.66
HDAC6-227ENST00000485102 PRKDCP78527 4128 aaKnown RBP10.94□□□□□ -0.66
HDAC6-227ENST00000485102 A0A1B0GUS0 222 aa10.94□□□□□ -0.66
HDAC6-227ENST00000485102 SURF4O15260 269 aa10.94□□□□□ -0.66
HDAC6-227ENST00000485102 TIMM8AO60220 97 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-227ENST00000485102 CIB2O75838 187 aa10.94□□□□□ -0.66
HDAC6-227ENST00000485102 WNT2P09544 360 aa10.94□□□□□ -0.66
HDAC6-227ENST00000485102 GSTM3P21266 225 aa10.94□□□□□ -0.66
HDAC6-227ENST00000485102 CD80P33681 288 aa10.94□□□□□ -0.66
HDAC6-227ENST00000485102 MDH2P40926 338 aaKnown RBP10.94□□□□□ -0.66
HDAC6-227ENST00000485102 GUCA1AP43080 201 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-227ENST00000485102 MTNR1AP48039 350 aa10.94□□□□□ -0.66
HDAC6-227ENST00000485102 RPL27P61353 136 aaKnown RBP10.94□□□□□ -0.66
HDAC6-227ENST00000485102 DEFA6Q01524 100 aa10.94□□□□□ -0.66
HDAC6-227ENST00000485102 FMODQ06828 376 aa10.94□□□□□ -0.66
HDAC6-227ENST00000485102 CD47Q08722 323 aa10.94□□□□□ -0.66
HDAC6-227ENST00000485102 ZMYND11Q15326 602 aa10.94□□□□□ -0.66
HDAC6-227ENST00000485102 SLC9A3R2Q15599 337 aa10.94□□□□□ -0.66
HDAC6-227ENST00000485102 ANKDD1AQ495B1 522 aa10.94□□□□□ -0.66
HDAC6-227ENST00000485102 FAM205BPQ63HN1 556 aa10.94□□□□□ -0.66
HDAC6-227ENST00000485102 CYP4Z1Q86W10 505 aa10.94□□□□□ -0.66
HDAC6-227ENST00000485102 DHFR2Q86XF0 187 aa10.94□□□□□ -0.66
HDAC6-227ENST00000485102 MUC20Q8N307 709 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-227ENST00000485102 TMEM255BQ8WV15 326 aa10.94□□□□□ -0.66
HDAC6-227ENST00000485102 NSMAFQ92636 917 aa10.94□□□□□ -0.66
HDAC6-227ENST00000485102 DACT3Q96B18 629 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-227ENST00000485102 COG8Q96MW5 612 aa10.94□□□□□ -0.66
HDAC6-227ENST00000485102 DCLRE1CQ96SD1 692 aaKnown RBP10.94□□□□□ -0.66
HDAC6-227ENST00000485102 C1QTNF5Q9BXJ0 243 aa10.94□□□□□ -0.66
HDAC6-227ENST00000485102 PPP1R3CQ9UQK1 317 aa10.94□□□□□ -0.66
HDAC6-227ENST00000485102 LRCH1Q9Y2L9 728 aa10.94□□□□□ -0.66
HDAC6-227ENST00000485102 MED31Q9Y3C7 131 aa10.94□□□□□ -0.66
HDAC6-227ENST00000485102 VWFP04275 2813 aa10.94□□□□□ -0.66
HDAC6-227ENST00000485102 C12orf71A8MTZ7 269 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms