RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 HLA-DQA2P01906 255 aa10.48□□□□□ -0.73
MSH5-216ENST00000484309 RAP2AP10114 183 aa10.48□□□□□ -0.73
MSH5-216ENST00000484309 ZNF23P17027 643 aa10.48□□□□□ -0.73
MSH5-216ENST00000484309 PYCR1P32322 319 aa10.48□□□□□ -0.73
MSH5-216ENST00000484309 ARHGDIAP52565 204 aa10.48□□□□□ -0.73
MSH5-216ENST00000484309 LSM6P62312 80 aaKnown RBP10.48□□□□□ -0.73
MSH5-216ENST00000484309 HNRNPA0Q13151 305 aaKnown RBP10.48□□□□□ -0.73
MSH5-216ENST00000484309 RIN1Q13671 783 aa10.48□□□□□ -0.73
MSH5-216ENST00000484309 CCNIQ14094 377 aa10.48□□□□□ -0.73
MSH5-216ENST00000484309 MICAQ29983 383 aa10.48□□□□□ -0.73
MSH5-216ENST00000484309 CYB5R2Q6BCY4 276 aa10.48□□□□□ -0.73
MSH5-216ENST00000484309 SPATA24Q86W54 205 aa10.48□□□□□ -0.73
MSH5-216ENST00000484309 LINC00471Q8N535 108 aa10.48□□□□□ -0.73
MSH5-216ENST00000484309 OR10G2Q8NGC3 310 aa10.48□□□□□ -0.73
MSH5-216ENST00000484309 OR1F12Q8NHA8 337 aa10.48□□□□□ -0.73
MSH5-216ENST00000484309 CANT1Q8WVQ1 401 aa10.48□□□□□ -0.73
MSH5-216ENST00000484309 RACGAP1Q9H0H5 632 aa10.48□□□□□ -0.73
MSH5-216ENST00000484309 CHODLQ9H9P2 273 aa10.48□□□□□ -0.73
MSH5-216ENST00000484309 ELOVL3Q9HB03 270 aa10.48□□□□□ -0.73
MSH5-216ENST00000484309 ZNF275Q9NSD4 429 aaPredicted RBP10.48□□□□□ -0.73
MSH5-216ENST00000484309 ARMC1Q9NVT9 282 aa10.48□□□□□ -0.73
MSH5-216ENST00000484309 GPR160Q9UJ42 338 aa10.48□□□□□ -0.73
MSH5-216ENST00000484309 LHFPL6Q9Y693 200 aa10.48□□□□□ -0.73
MSH5-216ENST00000484309 LOC100289279A0A1B0GTE1 492 aa10.47□□□□□ -0.73
MSH5-216ENST00000484309 DHRS12A0PJE2 317 aa10.47□□□□□ -0.73
MSH5-216ENST00000484309 OR6C6A6NF89 314 aa10.47□□□□□ -0.73
MSH5-216ENST00000484309 TVP23AA6NH52 213 aa10.47□□□□□ -0.73
MSH5-216ENST00000484309 ZSCAN5BA6NJL1 495 aa10.47□□□□□ -0.73
MSH5-216ENST00000484309 BHLHE40O14503 412 aa10.47□□□□□ -0.73
MSH5-216ENST00000484309 CST1P01037 141 aa10.47□□□□□ -0.73
MSH5-216ENST00000484309 TFP02787 698 aa10.47□□□□□ -0.73
MSH5-216ENST00000484309 COX5BP10606 129 aa10.47□□□□□ -0.73
MSH5-216ENST00000484309 GPR6P46095 362 aaPredicted RBP10.47□□□□□ -0.73
MSH5-216ENST00000484309 GZMKP49863 264 aa10.47□□□□□ -0.73
MSH5-216ENST00000484309 ZNF81P51508 661 aa10.47□□□□□ -0.73
MSH5-216ENST00000484309 TEKQ02763 1124 aa10.47□□□□□ -0.73
MSH5-216ENST00000484309 TRAP1Q12931 704 aaKnown RBP10.47□□□□□ -0.73
MSH5-216ENST00000484309 FLOT2Q14254 428 aa10.47□□□□□ -0.73
MSH5-216ENST00000484309 KCNMB1Q16558 191 aa10.47□□□□□ -0.73
MSH5-216ENST00000484309 DNAL1Q4LDG9 190 aa10.47□□□□□ -0.73
MSH5-216ENST00000484309 RPL13AP3Q6NVV1 102 aa10.47□□□□□ -0.73
MSH5-216ENST00000484309 LYPD4Q6UWN0 246 aa10.47□□□□□ -0.73
MSH5-216ENST00000484309 UNQ6126/PRO20091Q6UXV3 157 aa10.47□□□□□ -0.73
MSH5-216ENST00000484309 RASSF6Q6ZTQ3 369 aa10.47□□□□□ -0.73
MSH5-216ENST00000484309 IL17RELQ6ZVW7 336 aa10.47□□□□□ -0.73
MSH5-216ENST00000484309 TMEM179BQ7Z7N9 219 aa10.47□□□□□ -0.73
MSH5-216ENST00000484309 NPEPL1Q8NDH3 523 aa10.47□□□□□ -0.73
MSH5-216ENST00000484309 ZNF540Q8NDQ6 660 aa10.47□□□□□ -0.73
MSH5-216ENST00000484309 SLC26A10Q8NG04 563 aa10.47□□□□□ -0.73
MSH5-216ENST00000484309 OR51L1Q8NGJ5 315 aa10.47□□□□□ -0.73
MSH5-216ENST00000484309 OR9Q1Q8NGQ5 310 aa10.47□□□□□ -0.73
MSH5-216ENST00000484309 OR4Q3Q8NH05 313 aa10.47□□□□□ -0.73
MSH5-216ENST00000484309 RDH5Q92781 318 aa10.47□□□□□ -0.73
MSH5-216ENST00000484309 MSI2Q96DH6 328 aaKnown RBP10.47□□□□□ -0.73
MSH5-216ENST00000484309 NIPSNAP1Q9BPW8 284 aa10.47□□□□□ -0.73
MSH5-216ENST00000484309 WACQ9BTA9 647 aa10.47□□□□□ -0.73
MSH5-216ENST00000484309 CHID1Q9BWS9 393 aa10.47□□□□□ -0.73
MSH5-216ENST00000484309 TSSK6Q9BXA6 273 aa10.47□□□□□ -0.73
MSH5-216ENST00000484309 MSL2Q9HCI7 577 aa10.47□□□□□ -0.73
MSH5-216ENST00000484309 TREM2Q9NZC2 230 aa10.47□□□□□ -0.73
MSH5-216ENST00000484309 STARD10Q9Y365 291 aa10.47□□□□□ -0.73
MSH5-216ENST00000484309 CACNG2Q9Y698 323 aa10.47□□□□□ -0.73
MSH5-216ENST00000484309 PLSCR5A0PG75 271 aa10.46□□□□□ -0.73
MSH5-216ENST00000484309 AQP12BA6NM10 295 aa10.46□□□□□ -0.73
MSH5-216ENST00000484309 KIAA1324LA8MWY0 1029 aaPredicted RBP10.46□□□□□ -0.73
MSH5-216ENST00000484309 GNGT2O14610 69 aa10.46□□□□□ -0.73
MSH5-216ENST00000484309 WNT9BO14905 357 aa10.46□□□□□ -0.73
MSH5-216ENST00000484309 PPIHO43447 177 aaKnown RBP10.46□□□□□ -0.73
MSH5-216ENST00000484309 IDH3BO43837 385 aa10.46□□□□□ -0.73
MSH5-216ENST00000484309 TIMM8AO60220 97 aaPredicted RBP10.46□□□□□ -0.73
MSH5-216ENST00000484309 ICMTO60725 284 aa10.46□□□□□ -0.73
MSH5-216ENST00000484309 DNAJC8O75937 253 aaPredicted RBP10.46□□□□□ -0.73
MSH5-216ENST00000484309 IGHV1-46P01743 117 aa10.46□□□□□ -0.73
MSH5-216ENST00000484309 MT-ND5P03915 603 aa10.46□□□□□ -0.73
MSH5-216ENST00000484309 TACSTD2P09758 323 aa10.46□□□□□ -0.73
MSH5-216ENST00000484309 ACHEP22303 614 aa10.46□□□□□ -0.73
MSH5-216ENST00000484309 RBMXP38159 391 aaKnown RBP10.46□□□□□ -0.73
MSH5-216ENST00000484309 RPS27P42677 84 aaKnown RBP10.46□□□□□ -0.73
MSH5-216ENST00000484309 MMP15P51511 669 aa10.46□□□□□ -0.73
MSH5-216ENST00000484309 CHN2P52757 468 aa10.46□□□□□ -0.73
MSH5-216ENST00000484309 PSG7Q13046 419 aa10.46□□□□□ -0.73
MSH5-216ENST00000484309 KRTAP21-3Q3LHN1 58 aa10.46□□□□□ -0.73
MSH5-216ENST00000484309 SPRNQ5BIV9 151 aa10.46□□□□□ -0.73
MSH5-216ENST00000484309 AVPI1Q5T686 147 aa10.46□□□□□ -0.73
MSH5-216ENST00000484309 MBNL2Q5VZF2 373 aaKnown RBP10.46□□□□□ -0.73
MSH5-216ENST00000484309 PGM2L1Q6PCE3 622 aa10.46□□□□□ -0.73
MSH5-216ENST00000484309 ARL9Q6T311 187 aa10.46□□□□□ -0.73
MSH5-216ENST00000484309 CFAP77Q6ZQR2 320 aa10.46□□□□□ -0.73
MSH5-216ENST00000484309 USP51Q70EK9 711 aa10.46□□□□□ -0.73
MSH5-216ENST00000484309 ZBTB46Q86UZ6 589 aa10.46□□□□□ -0.73
MSH5-216ENST00000484309 AQP12AQ8IXF9 295 aa10.46□□□□□ -0.73
MSH5-216ENST00000484309 IQCF1Q8N6M8 205 aa10.46□□□□□ -0.73
MSH5-216ENST00000484309 SLC37A3Q8NCC5 494 aa10.46□□□□□ -0.73
MSH5-216ENST00000484309 PROKR2Q8NFJ6 384 aa10.46□□□□□ -0.73
MSH5-216ENST00000484309 GIPC3Q8TF64 312 aa10.46□□□□□ -0.73
MSH5-216ENST00000484309 ZNRF4Q8WWF5 429 aa10.46□□□□□ -0.73
MSH5-216ENST00000484309 DGCR6LQ9BY27 220 aa10.46□□□□□ -0.73
MSH5-216ENST00000484309 DECR2Q9NUI1 292 aa10.46□□□□□ -0.73
MSH5-216ENST00000484309 MRPL22Q9NWU5 206 aaKnown RBP10.46□□□□□ -0.73
MSH5-216ENST00000484309 IL20Q9NYY1 176 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms