RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 HRES1P13985 223 aa1.19□□□□□ -2.22
SCAF11-207ENST00000484275 ADARB1P78563 741 aaKnown RBP1.19□□□□□ -2.22
SCAF11-207ENST00000484275 IHHQ14623 411 aa1.19□□□□□ -2.22
SCAF11-207ENST00000484275 CCDC152Q4G0S7 254 aa1.19□□□□□ -2.22
SCAF11-207ENST00000484275 KRTAP5-10Q6L8G5 202 aa1.19□□□□□ -2.22
SCAF11-207ENST00000484275 PDIK1LQ8N165 341 aa1.19□□□□□ -2.22
SCAF11-207ENST00000484275 MS4A15Q8N5U1 240 aa1.19□□□□□ -2.22
SCAF11-207ENST00000484275 EID2Q8N6I1 236 aa1.19□□□□□ -2.22
SCAF11-207ENST00000484275 TEX9Q8N6V9 391 aa1.19□□□□□ -2.22
SCAF11-207ENST00000484275 TRPV1Q8NER1 839 aa1.19□□□□□ -2.22
SCAF11-207ENST00000484275 CXorf40AQ8TE69 158 aa1.19□□□□□ -2.22
SCAF11-207ENST00000484275 SNX6Q9UNH7 406 aa1.19□□□□□ -2.22
SCAF11-207ENST00000484275 BAZ2AQ9UIF9 1905 aaKnown RBP1.19□□□□□ -2.22
SCAF11-207ENST00000484275 HELZ2Q9BYK8 2649 aaKnown RBP1.18□□□□□ -2.22
SCAF11-207ENST00000484275 IGHV7-4-1A0A0J9YVY3 117 aa1.18□□□□□ -2.22
SCAF11-207ENST00000484275 BTBD17A6NE02 478 aa1.18□□□□□ -2.22
SCAF11-207ENST00000484275 CEACAM18A8MTB9 384 aa1.18□□□□□ -2.22
SCAF11-207ENST00000484275 ANGPT2O15123 496 aa1.18□□□□□ -2.22
SCAF11-207ENST00000484275 TSPAN12O95859 305 aa1.18□□□□□ -2.22
SCAF11-207ENST00000484275 CYB5R3P00387 301 aaPredicted RBP1.18□□□□□ -2.22
SCAF11-207ENST00000484275 LHBP01229 141 aa1.18□□□□□ -2.22
SCAF11-207ENST00000484275 HEXBP07686 556 aa1.18□□□□□ -2.22
SCAF11-207ENST00000484275 CTSLP07711 333 aa1.18□□□□□ -2.22
SCAF11-207ENST00000484275 ZNF250P15622 560 aa1.18□□□□□ -2.22
SCAF11-207ENST00000484275 DESP17661 470 aa1.18□□□□□ -2.22
SCAF11-207ENST00000484275 HCAR3P49019 387 aa1.18□□□□□ -2.22
SCAF11-207ENST00000484275 PRLHRP49683 370 aa1.18□□□□□ -2.22
SCAF11-207ENST00000484275 YWHAGP61981 247 aaKnown RBP eCLIP1.18□□□□□ -2.22
SCAF11-207ENST00000484275 CCNA1P78396 465 aa1.18□□□□□ -2.22
SCAF11-207ENST00000484275 DEFB134Q4QY38 66 aa1.18□□□□□ -2.22
SCAF11-207ENST00000484275 ANKRD26P1Q6NSI1 321 aa1.18□□□□□ -2.22
SCAF11-207ENST00000484275 Q8NDZ9 215 aa1.18□□□□□ -2.22
SCAF11-207ENST00000484275 RHEBL1Q8TAI7 183 aa1.18□□□□□ -2.22
SCAF11-207ENST00000484275 STACQ99469 402 aa1.18□□□□□ -2.22
SCAF11-207ENST00000484275 ERP44Q9BS26 406 aa1.18□□□□□ -2.22
SCAF11-207ENST00000484275 SLC7A8Q9UHI5 535 aa1.18□□□□□ -2.22
SCAF11-207ENST00000484275 KMT2BQ9UMN6 2715 aaPredicted RBP1.17□□□□□ -2.22
SCAF11-207ENST00000484275 MAPK8IP3Q9UPT6 1336 aa1.17□□□□□ -2.22
SCAF11-207ENST00000484275 TRAV6A0A075B6T7 132 aa1.17□□□□□ -2.22
SCAF11-207ENST00000484275 TRAV19A0A0A6YYK7 116 aa1.17□□□□□ -2.22
SCAF11-207ENST00000484275 IGHV3-72A0A0B4J1Y9 119 aa1.17□□□□□ -2.22
SCAF11-207ENST00000484275 IGKV1-8A0A0C4DH67 115 aa1.17□□□□□ -2.22
SCAF11-207ENST00000484275 OR6C74A6NCV1 312 aa1.17□□□□□ -2.22
SCAF11-207ENST00000484275 KRBOX1C9JBD0 128 aa1.17□□□□□ -2.22
SCAF11-207ENST00000484275 NDC80O14777 642 aa1.17□□□□□ -2.22
SCAF11-207ENST00000484275 ZNF208O43345 1280 aa1.17□□□□□ -2.22
SCAF11-207ENST00000484275 CLIC3O95833 236 aa1.17□□□□□ -2.22
SCAF11-207ENST00000484275 EIF4EP06730 217 aaKnown RBP1.17□□□□□ -2.22
SCAF11-207ENST00000484275 TGFBR2P37173 567 aa1.17□□□□□ -2.22
SCAF11-207ENST00000484275 SEC61GP60059 68 aa1.17□□□□□ -2.22
SCAF11-207ENST00000484275 H2BFWTQ7Z2G1 175 aa1.17□□□□□ -2.22
SCAF11-207ENST00000484275 EFL1Q7Z2Z2 1120 aaKnown RBP1.17□□□□□ -2.22
SCAF11-207ENST00000484275 OR5T1Q8NG75 326 aa1.17□□□□□ -2.22
SCAF11-207ENST00000484275 LRRC29Q8WV35 223 aa1.17□□□□□ -2.22
SCAF11-207ENST00000484275 TBC1D31Q96DN5 1066 aa1.17□□□□□ -2.22
SCAF11-207ENST00000484275 PKNOX2Q96KN3 472 aa1.17□□□□□ -2.22
SCAF11-207ENST00000484275 RSG1Q9BU20 258 aa1.17□□□□□ -2.22
SCAF11-207ENST00000484275 TRMT112Q9UI30 125 aaKnown RBP1.17□□□□□ -2.22
SCAF11-207ENST00000484275 LSM7Q9UK45 103 aaKnown RBP1.17□□□□□ -2.22
SCAF11-207ENST00000484275 VANGL2Q9ULK5 521 aa1.17□□□□□ -2.22
SCAF11-207ENST00000484275 ATP6V0A2Q9Y487 856 aa1.17□□□□□ -2.22
SCAF11-207ENST00000484275 DDX49Q9Y6V7 483 aaKnown RBP1.17□□□□□ -2.22
SCAF11-207ENST00000484275 COL5A3P25940 1745 aaPredicted RBP1.17□□□□□ -2.22
SCAF11-207ENST00000484275 GABRR3A8MPY1 467 aa1.16□□□□□ -2.22
SCAF11-207ENST00000484275 C3orf84H3BNL1 204 aa1.16□□□□□ -2.22
SCAF11-207ENST00000484275 RDH16O75452 317 aa1.16□□□□□ -2.22
SCAF11-207ENST00000484275 CLPXO76031 633 aa1.16□□□□□ -2.22
SCAF11-207ENST00000484275 SLC22A5O76082 557 aa1.16□□□□□ -2.22
SCAF11-207ENST00000484275 GUCA1CO95843 209 aa1.16□□□□□ -2.22
SCAF11-207ENST00000484275 CD37P11049 281 aa1.16□□□□□ -2.22
SCAF11-207ENST00000484275 RAB3AP20336 220 aa1.16□□□□□ -2.22
SCAF11-207ENST00000484275 KITLGP21583 273 aa1.16□□□□□ -2.22
SCAF11-207ENST00000484275 F2RP25116 425 aa1.16□□□□□ -2.22
SCAF11-207ENST00000484275 GPX4P36969 197 aaPredicted RBP1.16□□□□□ -2.22
SCAF11-207ENST00000484275 P2RX1P51575 399 aa1.16□□□□□ -2.22
SCAF11-207ENST00000484275 GFERP55789 205 aa1.16□□□□□ -2.22
SCAF11-207ENST00000484275 TEX30Q5JUR7 227 aa1.16□□□□□ -2.22
SCAF11-207ENST00000484275 WDR59Q6PJI9 974 aa1.16□□□□□ -2.22
SCAF11-207ENST00000484275 EGFL6Q8IUX8 553 aa1.16□□□□□ -2.22
SCAF11-207ENST00000484275 LIX1Q8N485 282 aa1.16□□□□□ -2.22
SCAF11-207ENST00000484275 ZNF645Q8N7E2 425 aa1.16□□□□□ -2.22
SCAF11-207ENST00000484275 COX18Q8N8Q8 333 aa1.16□□□□□ -2.22
SCAF11-207ENST00000484275 PLPPR1Q8TBJ4 325 aa1.16□□□□□ -2.22
SCAF11-207ENST00000484275 UBE2Q2Q8WVN8 375 aa1.16□□□□□ -2.22
SCAF11-207ENST00000484275 STMN2Q93045 179 aa1.16□□□□□ -2.22
SCAF11-207ENST00000484275 SYAP1Q96A49 352 aaPredicted RBP1.16□□□□□ -2.22
SCAF11-207ENST00000484275 DUS3LQ96G46 650 aaKnown RBP1.16□□□□□ -2.22
SCAF11-207ENST00000484275 LINC00574Q9H8X3 128 aa1.16□□□□□ -2.22
SCAF11-207ENST00000484275 NEK6Q9HC98 313 aa1.16□□□□□ -2.22
SCAF11-207ENST00000484275 SH3BGRL2Q9UJC5 107 aa1.16□□□□□ -2.22
SCAF11-207ENST00000484275 AP1M2Q9Y6Q5 423 aa1.16□□□□□ -2.22
SCAF11-207ENST00000484275 NACADO15069 1562 aa1.16□□□□□ -2.22
SCAF11-207ENST00000484275 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
SCAF11-207ENST00000484275 IGHV3-49A0A0A0MS15 119 aa1.15□□□□□ -2.23
SCAF11-207ENST00000484275 IGHV1-3A0A0C4DH29 117 aa1.15□□□□□ -2.23
SCAF11-207ENST00000484275 OR5H1A6NKK0 313 aa1.15□□□□□ -2.23
SCAF11-207ENST00000484275 NDUFC2-KCTD14E9PQ53 114 aa1.15□□□□□ -2.23
SCAF11-207ENST00000484275 NVLO15381 856 aaKnown RBP1.15□□□□□ -2.23
SCAF11-207ENST00000484275 EEDO75530 441 aaKnown RBP1.15□□□□□ -2.23
SCAF11-207ENST00000484275 ZNF35P13682 527 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms