RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 ARPINQ7Z6K5 226 aa15.18■□□□□ 0.02
ATG4B-221ENST00000483778 C1orf174Q8IYL3 243 aa15.18■□□□□ 0.02
ATG4B-221ENST00000483778 FAM216AQ8WUB2 273 aa15.18■□□□□ 0.02
ATG4B-221ENST00000483778 SIGLEC11Q96RL6 698 aa15.18■□□□□ 0.02
ATG4B-221ENST00000483778 HOPXQ9BPY8 73 aaPredicted RBP15.18■□□□□ 0.02
ATG4B-221ENST00000483778 NUAK2Q9H093 628 aa15.18■□□□□ 0.02
ATG4B-221ENST00000483778 NRIP3Q9NQ35 241 aa15.18■□□□□ 0.02
ATG4B-221ENST00000483778 TMEM106BQ9NUM4 274 aa15.18■□□□□ 0.02
ATG4B-221ENST00000483778 NDRG4Q9ULP0 352 aaKnown RBP15.18■□□□□ 0.02
ATG4B-221ENST00000483778 AP3M1Q9Y2T2 418 aa15.18■□□□□ 0.02
ATG4B-221ENST00000483778 PKD1L1Q8TDX9 2849 aa15.17■□□□□ 0.02
ATG4B-221ENST00000483778 OR6C6A6NF89 314 aa15.17■□□□□ 0.02
ATG4B-221ENST00000483778 J3QLI3 93 aa15.17■□□□□ 0.02
ATG4B-221ENST00000483778 ACTG1P63261 375 aa15.17■□□□□ 0.02
ATG4B-221ENST00000483778 KRR1Q13601 381 aaKnown RBP15.17■□□□□ 0.02
ATG4B-221ENST00000483778 ZMYND11Q15326 602 aa15.17■□□□□ 0.02
ATG4B-221ENST00000483778 MEP1BQ16820 701 aa15.17■□□□□ 0.02
ATG4B-221ENST00000483778 RRM2BQ7LG56 351 aa15.17■□□□□ 0.02
ATG4B-221ENST00000483778 LRRC28Q86X40 367 aaPredicted RBP15.17■□□□□ 0.02
ATG4B-221ENST00000483778 OR5AS1Q8N127 324 aa15.17■□□□□ 0.02
ATG4B-221ENST00000483778 ZNF283Q8N7M2 679 aa15.17■□□□□ 0.02
ATG4B-221ENST00000483778 DEFB108BQ8NET1 73 aa15.17■□□□□ 0.02
ATG4B-221ENST00000483778 NANPQ8TBE9 248 aa15.17■□□□□ 0.02
ATG4B-221ENST00000483778 FAM162AQ96A26 154 aa15.17■□□□□ 0.02
ATG4B-221ENST00000483778 DIRC2Q96SL1 478 aa15.17■□□□□ 0.02
ATG4B-221ENST00000483778 FUZQ9BT04 418 aa15.17■□□□□ 0.02
ATG4B-221ENST00000483778 C1QTNF5Q9BXJ0 243 aa15.17■□□□□ 0.02
ATG4B-221ENST00000483778 EFCAB1Q9HAE3 211 aa15.17■□□□□ 0.02
ATG4B-221ENST00000483778 PLEK2Q9NYT0 353 aa15.17■□□□□ 0.02
ATG4B-221ENST00000483778 ASH2LQ9UBL3 628 aa15.17■□□□□ 0.02
ATG4B-221ENST00000483778 IGHV3-64DA0A0J9YX35 117 aa15.16■□□□□ 0.02
ATG4B-221ENST00000483778 H0YL77 283 aa15.16■□□□□ 0.02
ATG4B-221ENST00000483778 XKRYO14609 159 aa15.16■□□□□ 0.02
ATG4B-221ENST00000483778 AHCYL1O43865 530 aa15.16■□□□□ 0.02
ATG4B-221ENST00000483778 KHDRBS3O75525 346 aaKnown RBP15.16■□□□□ 0.02
ATG4B-221ENST00000483778 NDUFB2O95178 105 aa15.16■□□□□ 0.02
ATG4B-221ENST00000483778 ZNF205O95201 554 aa15.16■□□□□ 0.02
ATG4B-221ENST00000483778 H1F0P07305 194 aaKnown RBP15.16■□□□□ 0.02
ATG4B-221ENST00000483778 GSTM3P21266 225 aa15.16■□□□□ 0.02
ATG4B-221ENST00000483778 SDHAP31040 664 aa15.16■□□□□ 0.02
ATG4B-221ENST00000483778 COMPP49747 757 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-221ENST00000483778 NUDT2P50583 147 aa15.16■□□□□ 0.02
ATG4B-221ENST00000483778 PRSS12P56730 875 aa15.16■□□□□ 0.02
ATG4B-221ENST00000483778 PSME3P61289 254 aa15.16■□□□□ 0.02
ATG4B-221ENST00000483778 SLC3A1Q07837 685 aa15.16■□□□□ 0.02
ATG4B-221ENST00000483778 SCRN3Q0VDG4 424 aa15.16■□□□□ 0.02
ATG4B-221ENST00000483778 KLF17Q5JT82 389 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-221ENST00000483778 CORO6Q6QEF8 472 aa15.16■□□□□ 0.02
ATG4B-221ENST00000483778 ARL9Q6T311 187 aa15.16■□□□□ 0.02
ATG4B-221ENST00000483778 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-221ENST00000483778 GLB1L2Q8IW92 636 aa15.16■□□□□ 0.02
ATG4B-221ENST00000483778 BCL6BQ8N143 479 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-221ENST00000483778 RNF148Q8N7C7 305 aa15.16■□□□□ 0.02
ATG4B-221ENST00000483778 OR52J3Q8NH60 311 aa15.16■□□□□ 0.02
ATG4B-221ENST00000483778 OR1F12Q8NHA8 337 aa15.16■□□□□ 0.02
ATG4B-221ENST00000483778 GCDHQ92947 438 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-221ENST00000483778 SAMD8Q96LT4 415 aa15.16■□□□□ 0.02
ATG4B-221ENST00000483778 KCTD14Q9BQ13 255 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-221ENST00000483778 PATZ1Q9HBE1 687 aaKnown RBP15.16■□□□□ 0.02
ATG4B-221ENST00000483778 PTTG3PQ9NZH4 202 aa15.16■□□□□ 0.02
ATG4B-221ENST00000483778 VSX1Q9NZR4 365 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-221ENST00000483778 CGGBP1Q9UFW8 167 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-221ENST00000483778 SOX21Q9Y651 276 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-221ENST00000483778 A0A1W2PRQ8 180 aa15.15■□□□□ 0.02
ATG4B-221ENST00000483778 EGR1P18146 543 aa15.15■□□□□ 0.02
ATG4B-221ENST00000483778 MDH1P40925 334 aaKnown RBP15.15■□□□□ 0.02
ATG4B-221ENST00000483778 SLC6A9P48067 706 aa15.15■□□□□ 0.02
ATG4B-221ENST00000483778 LSM6P62312 80 aaKnown RBP15.15■□□□□ 0.02
ATG4B-221ENST00000483778 AQP6Q13520 282 aa15.15■□□□□ 0.02
ATG4B-221ENST00000483778 DGCR6Q14129 220 aa15.15■□□□□ 0.02
ATG4B-221ENST00000483778 TUSC1Q2TAM9 212 aa15.15■□□□□ 0.02
ATG4B-221ENST00000483778 FGD3Q5JSP0 725 aa15.15■□□□□ 0.02
ATG4B-221ENST00000483778 OR2T2Q6IF00 324 aa15.15■□□□□ 0.02
ATG4B-221ENST00000483778 HACD2Q6Y1H2 254 aa15.15■□□□□ 0.02
ATG4B-221ENST00000483778 NPEPL1Q8NDH3 523 aa15.15■□□□□ 0.02
ATG4B-221ENST00000483778 ZNF420Q8TAQ5 688 aaPredicted RBP15.15■□□□□ 0.02
ATG4B-221ENST00000483778 ST7LQ8TDW4 575 aa15.15■□□□□ 0.02
ATG4B-221ENST00000483778 PTP4A1Q93096 173 aa15.15■□□□□ 0.02
ATG4B-221ENST00000483778 RSRC1Q96IZ7 334 aaKnown RBP15.15■□□□□ 0.02
ATG4B-221ENST00000483778 OR2V2Q96R30 315 aa15.15■□□□□ 0.02
ATG4B-221ENST00000483778 WACQ9BTA9 647 aa15.15■□□□□ 0.02
ATG4B-221ENST00000483778 ANKRD19PQ9H560 264 aa15.15■□□□□ 0.02
ATG4B-221ENST00000483778 ABCD2Q9UBJ2 740 aa15.15■□□□□ 0.02
ATG4B-221ENST00000483778 TMEM5Q9Y2B1 443 aa15.15■□□□□ 0.02
ATG4B-221ENST00000483778 LHFPL6Q9Y693 200 aa15.15■□□□□ 0.02
ATG4B-221ENST00000483778 UNC119BA6NIH7 251 aa15.14■□□□□ 0.01
ATG4B-221ENST00000483778 TRIM77I1YAP6 450 aa15.14■□□□□ 0.01
ATG4B-221ENST00000483778 HIST1H3AP68431 136 aa15.14■□□□□ 0.01
ATG4B-221ENST00000483778 KCNMB1Q16558 191 aa15.14■□□□□ 0.01
ATG4B-221ENST00000483778 HIST2H3PS2Q5TEC6 136 aa15.14■□□□□ 0.01
ATG4B-221ENST00000483778 GPR139Q6DWJ6 353 aa15.14■□□□□ 0.01
ATG4B-221ENST00000483778 GLYATQ6IB77 296 aa15.14■□□□□ 0.01
ATG4B-221ENST00000483778 HIST2H3AQ71DI3 136 aa15.14■□□□□ 0.01
ATG4B-221ENST00000483778 ZER1Q7Z7L7 766 aa15.14■□□□□ 0.01
ATG4B-221ENST00000483778 NAA40Q86UY6 237 aa15.14■□□□□ 0.01
ATG4B-221ENST00000483778 CYP4Z1Q86W10 505 aa15.14■□□□□ 0.01
ATG4B-221ENST00000483778 DHRS1Q96LJ7 313 aa15.14■□□□□ 0.01
ATG4B-221ENST00000483778 DUX5Q96PT3 197 aa15.14■□□□□ 0.01
ATG4B-221ENST00000483778 GPX7Q96SL4 187 aaPredicted RBP15.14■□□□□ 0.01
ATG4B-221ENST00000483778 SUCNR1Q9BXA5 334 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms