RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 EXD3Q8N9H8 876 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 OR6N2Q8NGY6 317 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 ASB17Q8WXJ9 295 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 IGSF21Q96ID5 467 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 C4orf45Q96LM5 186 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 AMELYQ99218 206 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 PARP12Q9H0J9 701 aaKnown RBP10.63□□□□□ -0.71
VTI1A-205ENST00000483122 SLC2A8Q9NY64 477 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 SLC22A13Q9Y226 551 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 MRPS18BQ9Y676 258 aaKnown RBP10.63□□□□□ -0.71
VTI1A-205ENST00000483122 ARPC3O15145 178 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 BRINP1O60477 761 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 SLC35G4P0C7Q5 338 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 ZNF888P0CJ79 500 aaPredicted RBP10.62□□□□□ -0.71
VTI1A-205ENST00000483122 ADRB3P13945 408 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 GABRA3P34903 492 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 ARRB1P49407 418 aaPredicted RBP10.62□□□□□ -0.71
VTI1A-205ENST00000483122 RBP2P50120 134 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 SULT1A1P50225 295 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 SULT1A2P50226 295 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 MEF2DQ14814 521 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 TOMM20Q15388 145 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 GLYATL3Q5SZD4 288 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 NSUN5P2Q63ZY6 315 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 DPY19L4Q7Z388 723 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 FJX1Q86VR8 437 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 ZNF565Q8N9K5 539 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 ACBD4Q8NC06 268 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 OR51F2Q8NH61 342 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 NKD1Q969G9 470 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 ARRDC3Q96B67 414 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 PIGQQ9BRB3 760 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 RAB33BQ9H082 229 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 SLCO5A1Q9H2Y9 848 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 WDR76Q9H967 626 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 TAF9BQ9HBM6 251 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 SPACA1Q9HBV2 294 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 MKKSQ9NPJ1 570 aaPredicted RBP10.62□□□□□ -0.71
VTI1A-205ENST00000483122 DNAJB12Q9NXW2 375 aaKnown RBP10.62□□□□□ -0.71
VTI1A-205ENST00000483122 MAFFQ9ULX9 164 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 C19orf53Q9UNZ5 99 aaPredicted RBP10.62□□□□□ -0.71
VTI1A-205ENST00000483122 OR10H2O60403 315 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 MOSPD3O75425 235 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 ADH1AP07327 375 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 HTR2CP28335 458 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 CX3CR1P49238 355 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 TAS2R60P59551 318 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 DEFB103AP81534 67 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 KIAA0141Q14154 515 aaPredicted RBP10.62□□□□□ -0.71
VTI1A-205ENST00000483122 EEF1A1P5Q5VTE0 462 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 PRSS54Q6PEW0 395 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 REC114Q7Z4M0 266 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 RNF128Q8TEB7 428 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 CMBLQ96DG6 245 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 DCBLD2Q96PD2 775 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 CMKLR1Q99788 373 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 TRIM2Q9C040 744 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 UCK1Q9HA47 277 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 GTF2A1LQ9UNN4 478 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 AMDHD2Q9Y303 409 aa10.62□□□□□ -0.71
VTI1A-205ENST00000483122 OR52A4PA6NMU1 304 aa10.61□□□□□ -0.71
VTI1A-205ENST00000483122 IFNA17P01571 189 aa10.61□□□□□ -0.71
VTI1A-205ENST00000483122 RAB6AP20340 208 aa10.61□□□□□ -0.71
VTI1A-205ENST00000483122 MAP3K8P41279 467 aa10.61□□□□□ -0.71
VTI1A-205ENST00000483122 CDX1P47902 265 aaPredicted RBP10.61□□□□□ -0.71
VTI1A-205ENST00000483122 NDUFA6P56556 154 aa10.61□□□□□ -0.71
VTI1A-205ENST00000483122 FAM53BQ14153 422 aa10.61□□□□□ -0.71
VTI1A-205ENST00000483122 LY6G5CQ5SRR4 150 aa10.61□□□□□ -0.71
VTI1A-205ENST00000483122 AWAT2Q6E213 333 aa10.61□□□□□ -0.71
VTI1A-205ENST00000483122 TRAPPC6BQ86SZ2 158 aa10.61□□□□□ -0.71
VTI1A-205ENST00000483122 TCEAL8Q8IYN2 117 aa10.61□□□□□ -0.71
VTI1A-205ENST00000483122 CCDC54Q8NEL0 328 aa10.61□□□□□ -0.71
VTI1A-205ENST00000483122 MARCH1Q8TCQ1 289 aa10.61□□□□□ -0.71
VTI1A-205ENST00000483122 SLC25A43Q8WUT9 341 aaPredicted RBP10.61□□□□□ -0.71
VTI1A-205ENST00000483122 IRF7Q92985 503 aa10.61□□□□□ -0.71
VTI1A-205ENST00000483122 S100PBPQ96BU1 408 aa10.61□□□□□ -0.71
VTI1A-205ENST00000483122 AQP10Q96PS8 301 aa10.61□□□□□ -0.71
VTI1A-205ENST00000483122 PDE7BQ9NP56 450 aa10.61□□□□□ -0.71
VTI1A-205ENST00000483122 PARP11Q9NR21 331 aa10.61□□□□□ -0.71
VTI1A-205ENST00000483122 COL4A6Q14031 1691 aa10.61□□□□□ -0.71
VTI1A-205ENST00000483122 DCDC2BA2VCK2 349 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 GRXCR1A8MXD5 290 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 H7C1Q1 480 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 TERTO14746 1132 aaKnown RBP10.6□□□□□ -0.71
VTI1A-205ENST00000483122 PLGP00747 810 aaPredicted RBP10.6□□□□□ -0.71
VTI1A-205ENST00000483122 CPMP14384 443 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 PEBP1P30086 187 aaKnown RBP10.6□□□□□ -0.71
VTI1A-205ENST00000483122 HRH1P35367 487 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 RAB28P51157 221 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 ZNF765Q7L2R6 523 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 OR56B1Q8NGI3 324 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 OR51A2Q8NGJ7 313 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 ZCCHC10Q8TBK6 192 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 RBM14Q96PK6 669 aaKnown RBP10.6□□□□□ -0.71
VTI1A-205ENST00000483122 DUSP22Q9NRW4 184 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 GFOD1Q9NXC2 390 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 TAS2R4Q9NYW5 299 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 ZNF107Q9UII5 783 aaPredicted RBP10.6□□□□□ -0.71
VTI1A-205ENST00000483122 FBXL21Q9UKT6 434 aa10.6□□□□□ -0.71
VTI1A-205ENST00000483122 KCNK6Q9Y257 313 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms