RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 RHOUQ7L0Q8 258 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 NKAIN4Q8IVV8 208 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 MUC20Q8N307 709 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-206ENST00000483030 POU5F2Q8N7G0 328 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 CLDN22Q8N7P3 220 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 ATG16L2Q8NAA4 619 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 SLC26A7Q8TE54 656 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 TAMM41Q96BW9 452 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 SGTBQ96EQ0 304 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 OR2V2Q96R30 315 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 PARD6BQ9BYG5 372 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 PCDHAC1Q9H158 963 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 MMP27Q9H306 513 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 MARCH7Q9H992 704 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 TMEM165Q9HC07 324 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 GCM1Q9NP62 436 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 C20orf141Q9NUB4 165 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 TBCCD1Q9NVR7 557 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 NKIRAS1Q9NYS0 192 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 C1RLQ9NZP8 487 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 STX18Q9P2W9 335 aaKnown RBP6.18□□□□□ -1.42
CSDE1-206ENST00000483030 IL19Q9UHD0 177 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 LRCH1Q9Y2L9 728 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 STARD10Q9Y365 291 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 NOTCH1P46531 2555 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 IGHV2-70DA0A0C4DH43 119 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 IGHV3-64DA0A0J9YX35 117 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 KIR2DS1A0A191URI9 304 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 A0A1W2PPL8 197 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 CLPSL1A2RUU4 121 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 C12orf71A8MTZ7 269 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 SRRM5B3KS81 715 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 M0QZ24 198 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 CYB5R3P00387 301 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-206ENST00000483030 SCG5P05408 212 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 THRBP10828 461 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 RPS2P15880 293 aaKnown RBP6.17□□□□□ -1.42
CSDE1-206ENST00000483030 KITLGP21583 273 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 ERFP50548 548 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 SLC18A1P54219 525 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 MTPNP58546 118 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 KRTAP10-3P60369 221 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 GNB2P62879 340 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 RELBQ01201 579 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 SELPLGQ14242 412 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 ENDOGQ14249 297 aaKnown RBP6.17□□□□□ -1.42
CSDE1-206ENST00000483030 SLC27A4Q6P1M0 643 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 C1orf94Q6P1W5 598 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 Q6YL49 198 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 CROCCP2Q86T23 111 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 PATL1Q86TB9 770 aaKnown RBP6.17□□□□□ -1.42
CSDE1-206ENST00000483030 KLBQ86Z14 1044 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 C1QL4Q86Z23 238 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 SLC30A8Q8IWU4 369 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 OR5AS1Q8N127 324 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 ZNF420Q8TAQ5 688 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-206ENST00000483030 TMEM255BQ8WV15 326 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 TMEM239Q8WW34 195 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 PTP4A1Q93096 173 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 DACT3Q96B18 629 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-206ENST00000483030 HAVCR1Q96D42 359 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 THOC1Q96FV9 657 aaKnown RBP6.17□□□□□ -1.42
CSDE1-206ENST00000483030 PLEKHA8Q96JA3 519 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 EAF1Q96JC9 268 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-206ENST00000483030 CITED1Q99966 193 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 EBF4Q9BQW3 602 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 TMEM246Q9BRR3 403 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 ALG12Q9BV10 488 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 CHIAQ9BZP6 476 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 TXNIPQ9H3M7 391 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 PRDM13Q9H4Q3 707 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 MIOXQ9UGB7 285 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 RIMS3Q9UJD0 308 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 NDRG4Q9ULP0 352 aaKnown RBP6.17□□□□□ -1.42
CSDE1-206ENST00000483030 SH3GLB1Q9Y371 365 aa6.17□□□□□ -1.42
CSDE1-206ENST00000483030 GMNCA6NCL1 334 aa6.16□□□□□ -1.42
CSDE1-206ENST00000483030 NPIPB13A6NJU9 1138 aa6.16□□□□□ -1.42
CSDE1-206ENST00000483030 NPIPB4C9JG80 1138 aa6.16□□□□□ -1.42
CSDE1-206ENST00000483030 TIMM23O14925 209 aa6.16□□□□□ -1.42
CSDE1-206ENST00000483030 SHOX2O60902 331 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-206ENST00000483030 NDUFA7O95182 113 aa6.16□□□□□ -1.42
CSDE1-206ENST00000483030 VIMP08670 466 aaKnown RBP6.16□□□□□ -1.42
CSDE1-206ENST00000483030 TSPAN19P0C672 248 aa6.16□□□□□ -1.42
CSDE1-206ENST00000483030 NR2C1P13056 603 aa6.16□□□□□ -1.42
CSDE1-206ENST00000483030 SELEP16581 610 aa6.16□□□□□ -1.42
CSDE1-206ENST00000483030 TNFRSF1BP20333 461 aa6.16□□□□□ -1.42
CSDE1-206ENST00000483030 MSR1P21757 451 aa6.16□□□□□ -1.42
CSDE1-206ENST00000483030 TUBG1P23258 451 aa6.16□□□□□ -1.42
CSDE1-206ENST00000483030 CPT2P23786 658 aa6.16□□□□□ -1.42
CSDE1-206ENST00000483030 RBM34P42696 430 aaKnown RBP6.16□□□□□ -1.42
CSDE1-206ENST00000483030 HTR5AP47898 357 aa6.16□□□□□ -1.42
CSDE1-206ENST00000483030 RPS6KA3P51812 740 aa6.16□□□□□ -1.42
CSDE1-206ENST00000483030 TAS2R41P59536 307 aa6.16□□□□□ -1.42
CSDE1-206ENST00000483030 CTXN1P60606 82 aa6.16□□□□□ -1.42
CSDE1-206ENST00000483030 MAGOHP61326 146 aaKnown RBP6.16□□□□□ -1.42
CSDE1-206ENST00000483030 FGF12P61328 243 aa6.16□□□□□ -1.42
CSDE1-206ENST00000483030 RPL27P61353 136 aaKnown RBP6.16□□□□□ -1.42
CSDE1-206ENST00000483030 PIN1Q13526 163 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-206ENST00000483030 HLXQ14774 488 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-206ENST00000483030 ALG10Q5BKT4 473 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms