RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 NEDD8-MDP1E9PL57 170 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 RFPL4AL1F8VTS6 287 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 EPHB6O15197 1021 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 ANXA9O76027 345 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 RAB36O95755 333 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 OAS1P00973 400 aaKnown RBP3.49□□□□□ -1.85
VPS41-212ENST00000482217 HLA-AP01891 365 aaKnown RBP3.49□□□□□ -1.85
VPS41-212ENST00000482217 APOHP02749 345 aaPredicted RBP3.49□□□□□ -1.85
VPS41-212ENST00000482217 ISG15P05161 165 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 BCHEP06276 602 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 KLK3P07288 261 aaPredicted RBP3.49□□□□□ -1.85
VPS41-212ENST00000482217 PRSS2P07478 247 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 HOXD4P09016 255 aaPredicted RBP3.49□□□□□ -1.85
VPS41-212ENST00000482217 LIMS3P0CW19 117 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 LIMS4P0CW20 117 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 C8orf88P0DMB2 117 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 IGHV4-30-4P0DP06 118 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 HIST1H1EP10412 219 aaKnown RBP3.49□□□□□ -1.85
VPS41-212ENST00000482217 HIST1H1CP16403 213 aaKnown RBP3.49□□□□□ -1.85
VPS41-212ENST00000482217 ZNF17P17021 662 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 S100A7P31151 101 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 GPX4P36969 197 aaPredicted RBP3.49□□□□□ -1.85
VPS41-212ENST00000482217 AP2S1P53680 142 aaPredicted RBP3.49□□□□□ -1.85
VPS41-212ENST00000482217 CLDN6P56747 220 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 TAS2R41P59536 307 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 TAS2R31P59538 309 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 HILS1P60008 231 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 TFAMQ00059 246 aaKnown RBP3.49□□□□□ -1.85
VPS41-212ENST00000482217 IL5RAQ01344 420 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 LTBQ06643 244 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 CNTN1Q12860 1018 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 RBM39Q14498 530 aaKnown RBP3.49□□□□□ -1.85
VPS41-212ENST00000482217 OPCMLQ14982 345 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 C3AR1Q16581 482 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 CTF1Q16619 201 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 HAGHQ16775 308 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 ZNF672Q499Z4 452 aaPredicted RBP3.49□□□□□ -1.85
VPS41-212ENST00000482217 SPIN4Q56A73 249 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 HSD11B1LQ7Z5J1 315 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 C17orf64Q86WR6 236 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 CLDN22Q8N7P3 220 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 OR13D1Q8NGV5 346 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 OR5K2Q8NHB8 316 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 RNASE11Q8TAA1 199 aaKnown RBP3.49□□□□□ -1.85
VPS41-212ENST00000482217 SYNPRQ8TBG9 265 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 NDRG1Q92597 394 aaKnown RBP3.49□□□□□ -1.85
VPS41-212ENST00000482217 RAB8BQ92930 207 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 TESCQ96BS2 214 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 OR10C1Q96KK4 312 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 KCTD7Q96MP8 289 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 PPP1R2P1Q96PQ5 205 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 CLCC1Q96S66 551 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 TMEM204Q9BSN7 226 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 OSBPL11Q9BXB4 747 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 SLC19A3Q9BZV2 496 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 SPNS1Q9H2V7 528 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 DHX35Q9H5Z1 703 aaKnown RBP3.49□□□□□ -1.85
VPS41-212ENST00000482217 CWH43Q9H720 699 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 DDX19AQ9NUU7 478 aaKnown RBP3.49□□□□□ -1.85
VPS41-212ENST00000482217 SDHAF2Q9NX18 166 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 TREM2Q9NZC2 230 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 MLXQ9UH92 298 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 STUB1Q9UNE7 303 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 C14orf166Q9Y224 244 aaKnown RBP3.49□□□□□ -1.85
VPS41-212ENST00000482217 KCNIP3Q9Y2W7 256 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 NUBP2Q9Y5Y2 271 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 CPQQ9Y646 472 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 KIF24Q5T7B8 1368 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 MYH10P35580 1976 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 CCDC144AA2RUR9 1427 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 IGLV5-52A0A0A0MRZ9 124 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 TCRBV9S1A1TA0A576 114 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 MED19A0JLT2 244 aaPredicted RBP3.48□□□□□ -1.85
VPS41-212ENST00000482217 ANKRD20A5PA0PJZ0 165 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 TSPAN11A1L157 253 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 LINC01553A4QN01 128 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 RNF212BA8MTL3 300 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 EFCAB9A8MZ26 197 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 GFYI3L273 518 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 ALOX12BO75342 701 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 UGT2B17O75795 530 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 EIF3GO75821 320 aaKnown RBP eCLIP3.48□□□□□ -1.85
VPS41-212ENST00000482217 VENTXO95231 258 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 KRT75O95678 551 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 CLIC3O95833 236 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 IGSF6O95976 241 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 TACSTD2P09758 323 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 MBL2P11226 248 aaPredicted RBP3.48□□□□□ -1.85
VPS41-212ENST00000482217 GTF2F2P13984 249 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 GDF1P27539 372 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 RPL4P36578 427 aaKnown RBP3.48□□□□□ -1.85
VPS41-212ENST00000482217 GAS1P54826 345 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 UGT2B15P54855 530 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 BACE1P56817 501 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 LINC00205P59089 165 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 SNAP25P60880 206 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 RPL27P61353 136 aaKnown RBP3.48□□□□□ -1.85
VPS41-212ENST00000482217 MRPS11P82912 194 aaKnown RBP3.48□□□□□ -1.85
VPS41-212ENST00000482217 GUSBP1Q15486 140 aa3.48□□□□□ -1.85
VPS41-212ENST00000482217 OR1Q1Q15612 314 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms