RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 DLL4Q9NR61 685 aa12.88□□□□□ -0.35
CHD3-211ENST00000481999 P4HTMQ9NXG6 502 aa12.88□□□□□ -0.35
CHD3-211ENST00000481999 VSX1Q9NZR4 365 aaPredicted RBP12.88□□□□□ -0.35
CHD3-211ENST00000481999 FKBP7Q9Y680 259 aa12.88□□□□□ -0.35
CHD3-211ENST00000481999 TMEM14AQ9Y6G1 99 aa12.88□□□□□ -0.35
CHD3-211ENST00000481999 IGLV3-32A0A0A0MS00 114 aa12.88□□□□□ -0.35
CHD3-211ENST00000481999 ACOT7O00154 380 aa12.88□□□□□ -0.35
CHD3-211ENST00000481999 EIF1AYO14602 144 aaKnown RBP12.88□□□□□ -0.35
CHD3-211ENST00000481999 TP53I11O14683 189 aa12.88□□□□□ -0.35
CHD3-211ENST00000481999 ZNF208O43345 1280 aa12.88□□□□□ -0.35
CHD3-211ENST00000481999 DNASE1P24855 282 aa12.88□□□□□ -0.35
CHD3-211ENST00000481999 RFC3P40938 356 aa12.88□□□□□ -0.35
CHD3-211ENST00000481999 P2RY4P51582 365 aa12.88□□□□□ -0.35
CHD3-211ENST00000481999 P2RX3P56373 397 aa12.88□□□□□ -0.35
CHD3-211ENST00000481999 MLF1P58340 268 aa12.88□□□□□ -0.35
CHD3-211ENST00000481999 HES3Q5TGS1 186 aa12.88□□□□□ -0.35
CHD3-211ENST00000481999 METTL11BQ5VVY1 283 aa12.88□□□□□ -0.35
CHD3-211ENST00000481999 ZNF248Q8NDW4 579 aa12.88□□□□□ -0.35
CHD3-211ENST00000481999 ANGPTL6Q8NI99 470 aa12.88□□□□□ -0.35
CHD3-211ENST00000481999 M1APQ8TC57 530 aa12.88□□□□□ -0.35
CHD3-211ENST00000481999 ZNF775Q96BV0 537 aaPredicted RBP12.88□□□□□ -0.35
CHD3-211ENST00000481999 ZNF436Q9C0F3 470 aaPredicted RBP12.88□□□□□ -0.35
CHD3-211ENST00000481999 STRADBQ9C0K7 418 aa12.88□□□□□ -0.35
CHD3-211ENST00000481999 COMMD4Q9H0A8 199 aa12.88□□□□□ -0.35
CHD3-211ENST00000481999 FARSAQ9Y285 508 aaKnown RBP12.88□□□□□ -0.35
CHD3-211ENST00000481999 ZNF407Q9C0G0 2248 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 A0A1B0GUH1 482 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 ANKRD20A5PA0PJZ0 165 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 ETV2O00321 342 aaPredicted RBP12.87□□□□□ -0.35
CHD3-211ENST00000481999 SLC22A5O76082 557 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 HPXP02790 462 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 RFPL3SP0C7P2 107 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 CDAP32320 146 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 NHLH1Q02575 133 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 EGR3Q06889 387 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 OLFML2AQ68BL7 652 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 OPN5Q6U736 354 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 DND1Q8IYX4 353 aaKnown RBP12.87□□□□□ -0.35
CHD3-211ENST00000481999 ZNF680Q8NEM1 530 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 RADILQ96JH8 1075 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 TAAR9Q96RI9 348 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 UCN2Q96RP3 112 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 KCNK17Q96T54 332 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 SPRY4Q9C004 299 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 BEX1Q9HBH7 125 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 SDHAF3Q9NRP4 125 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 KLK11Q9UBX7 282 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 IL17BQ9UHF5 180 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 DNAJC13O75165 2243 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 LOC101059948A0A1B0GTJ6 334 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 OR4C45A6NMZ5 311 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 HSPB2A8KAH6 182 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 ZNF254O75437 659 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 MT-CO3P00414 261 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 ADRA2CP18825 462 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 CDK2P24941 298 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 KIR3DL2P43630 455 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 SCAND1P57086 179 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 HSPB2Q16082 182 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 ESCO2Q56NI9 601 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 WDR38Q5JTN6 314 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 LRRTM1Q86UE6 522 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 ZNF227Q86WZ6 799 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 ESX1Q8N693 406 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 OR2G2Q8NGZ5 317 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 LOXL4Q96JB6 756 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 SORCS2Q96PQ0 1159 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 ABHD6Q9BV23 337 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 OR10A4Q9H209 315 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 PARD6AQ9NPB6 346 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 ALKBH4Q9NXW9 302 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 FLVCR2Q9UPI3 526 aa12.87□□□□□ -0.35
CHD3-211ENST00000481999 TMEM212A6NML5 194 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 ANXA2P2A6NMY6 339 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 PHYHO14832 338 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 ZIC3O60481 467 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 ANXA2P07355 339 aaKnown RBP12.86□□□□□ -0.35
CHD3-211ENST00000481999 ANOS1P23352 680 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 DLSTP36957 453 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 VEGFCP49767 419 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 ZP1P60852 638 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 IKZF1Q13422 519 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 CAMK2BQ13554 666 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 EIF2B1Q14232 305 aaKnown RBP12.86□□□□□ -0.35
CHD3-211ENST00000481999 SLC25A53Q5H9E4 307 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 TMEM255AQ5JRV8 349 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 ATP1A1-AS1Q5TC04 95 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 YRDCQ86U90 279 aaKnown RBP12.86□□□□□ -0.35
CHD3-211ENST00000481999 TMPRSS12Q86WS5 348 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 ZNF676Q8N7Q3 588 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 PAQR8Q8TEZ7 354 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 C17orf50Q8WW18 174 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 PTGES2Q9H7Z7 377 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 HEXA-AS1Q9H8Q6 139 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 DEPPQ9NTK1 212 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 NCOA6Q14686 2063 aaPredicted RBP12.86□□□□□ -0.35
CHD3-211ENST00000481999 TRAV8-7A0A075B6U6 113 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 TRBV5-7A0A0A0MS05 114 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 IGHMP01871 453 aa12.86□□□□□ -0.35
CHD3-211ENST00000481999 ZNF806P0C7X5 589 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms