RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 LRRN1Q6UXK5 716 aa11.03□□□□□ -0.64
SIK3-209ENST00000480222 MRGPRGQ86SM5 289 aa11.03□□□□□ -0.64
SIK3-209ENST00000480222 LRRC18Q8N456 261 aa11.03□□□□□ -0.64
SIK3-209ENST00000480222 YIPF7Q8N8F6 280 aa11.03□□□□□ -0.64
SIK3-209ENST00000480222 RND1Q92730 232 aa11.03□□□□□ -0.64
SIK3-209ENST00000480222 HTRA1Q92743 480 aa11.03□□□□□ -0.64
SIK3-209ENST00000480222 FAM192AQ9GZU8 254 aa11.03□□□□□ -0.64
SIK3-209ENST00000480222 MOB1AQ9H8S9 216 aa11.03□□□□□ -0.64
SIK3-209ENST00000480222 ELOVL3Q9HB03 270 aa11.03□□□□□ -0.64
SIK3-209ENST00000480222 PNRC2Q9NPJ4 139 aaKnown RBP11.03□□□□□ -0.64
SIK3-209ENST00000480222 NDUFB11Q9NX14 153 aa11.03□□□□□ -0.64
SIK3-209ENST00000480222 GALNT8Q9NY28 637 aa11.03□□□□□ -0.64
SIK3-209ENST00000480222 SLCO1C1Q9NYB5 712 aa11.03□□□□□ -0.64
SIK3-209ENST00000480222 LRP12Q9Y561 859 aa11.03□□□□□ -0.64
SIK3-209ENST00000480222 TIMM10BQ9Y5J6 103 aa11.03□□□□□ -0.64
SIK3-209ENST00000480222 FREM1Q5H8C1 2179 aa11.02□□□□□ -0.65
SIK3-209ENST00000480222 DPPA5A6NC42 116 aa11.02□□□□□ -0.65
SIK3-209ENST00000480222 RER1O15258 196 aa11.02□□□□□ -0.65
SIK3-209ENST00000480222 SGCEO43556 437 aa11.02□□□□□ -0.65
SIK3-209ENST00000480222 NOL3O60936 208 aaKnown RBP11.02□□□□□ -0.65
SIK3-209ENST00000480222 WNT11O96014 354 aa11.02□□□□□ -0.65
SIK3-209ENST00000480222 CD1AP06126 327 aa11.02□□□□□ -0.65
SIK3-209ENST00000480222 MMP7P09237 267 aaPredicted RBP11.02□□□□□ -0.65
SIK3-209ENST00000480222 H2BFMP0C1H6 154 aa11.02□□□□□ -0.65
SIK3-209ENST00000480222 PSMA1P25786 263 aaKnown RBP11.02□□□□□ -0.65
SIK3-209ENST00000480222 ARR3P36575 388 aa11.02□□□□□ -0.65
SIK3-209ENST00000480222 TGFBR2P37173 567 aa11.02□□□□□ -0.65
SIK3-209ENST00000480222 FOXG1P55316 489 aaPredicted RBP11.02□□□□□ -0.65
SIK3-209ENST00000480222 PSMA6P60900 246 aaKnown RBP11.02□□□□□ -0.65
SIK3-209ENST00000480222 CDK5R1Q15078 307 aa11.02□□□□□ -0.65
SIK3-209ENST00000480222 TBRG1Q3YBR2 411 aa11.02□□□□□ -0.65
SIK3-209ENST00000480222 TIMM50Q3ZCQ8 353 aa11.02□□□□□ -0.65
SIK3-209ENST00000480222 ELFN2Q5R3F8 820 aa11.02□□□□□ -0.65
SIK3-209ENST00000480222 C9orf135Q5VTT2 229 aa11.02□□□□□ -0.65
SIK3-209ENST00000480222 LIPNQ5VXI9 398 aa11.02□□□□□ -0.65
SIK3-209ENST00000480222 FDX2Q6P4F2 183 aa11.02□□□□□ -0.65
SIK3-209ENST00000480222 RPL22L1Q6P5R6 122 aaKnown RBP11.02□□□□□ -0.65
SIK3-209ENST00000480222 P2RY8Q86VZ1 359 aa11.02□□□□□ -0.65
SIK3-209ENST00000480222 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.02□□□□□ -0.65
SIK3-209ENST00000480222 SKA3Q8IX90 412 aa11.02□□□□□ -0.65
SIK3-209ENST00000480222 ZNF843Q8N446 348 aa11.02□□□□□ -0.65
SIK3-209ENST00000480222 ZNF433Q8N7K0 673 aaPredicted RBP11.02□□□□□ -0.65
SIK3-209ENST00000480222 GALNT11Q8NCW6 608 aa11.02□□□□□ -0.65
SIK3-209ENST00000480222 OR10S1Q8NGN2 331 aa11.02□□□□□ -0.65
SIK3-209ENST00000480222 ZNF420Q8TAQ5 688 aaPredicted RBP11.02□□□□□ -0.65
SIK3-209ENST00000480222 RPS4Y2Q8TD47 263 aa11.02□□□□□ -0.65
SIK3-209ENST00000480222 BCL2L2Q92843 193 aaPredicted RBP11.02□□□□□ -0.65
SIK3-209ENST00000480222 SMIM19Q96E16 107 aa11.02□□□□□ -0.65
SIK3-209ENST00000480222 FBXO17Q96EF6 278 aa11.02□□□□□ -0.65
SIK3-209ENST00000480222 COQ7Q99807 217 aa11.02□□□□□ -0.65
SIK3-209ENST00000480222 ATF6BQ99941 703 aa11.02□□□□□ -0.65
SIK3-209ENST00000480222 SH3GL3Q99963 347 aa11.02□□□□□ -0.65
SIK3-209ENST00000480222 BCL7BQ9BQE9 202 aa11.02□□□□□ -0.65
SIK3-209ENST00000480222 OPN3Q9H1Y3 402 aaPredicted RBP11.02□□□□□ -0.65
SIK3-209ENST00000480222 MOV10Q9HCE1 1003 aaKnown RBP11.02□□□□□ -0.65
SIK3-209ENST00000480222 OBP2BQ9NPH6 170 aa11.02□□□□□ -0.65
SIK3-209ENST00000480222 PLEK2Q9NYT0 353 aa11.02□□□□□ -0.65
SIK3-209ENST00000480222 OSGIN2Q9Y236 505 aa11.02□□□□□ -0.65
SIK3-209ENST00000480222 INTS1Q8N201 2190 aaKnown RBP11.01□□□□□ -0.65
SIK3-209ENST00000480222 ARPC4-TTLL3A0A0A6YYG9 625 aa11.01□□□□□ -0.65
SIK3-209ENST00000480222 A6NHS1 94 aa11.01□□□□□ -0.65
SIK3-209ENST00000480222 ZNF701M0R085 212 aaPredicted RBP11.01□□□□□ -0.65
SIK3-209ENST00000480222 PLPP2O43688 288 aa11.01□□□□□ -0.65
SIK3-209ENST00000480222 DOK2O60496 412 aa11.01□□□□□ -0.65
SIK3-209ENST00000480222 LALBAP00709 142 aa11.01□□□□□ -0.65
SIK3-209ENST00000480222 APOC1P02654 83 aa11.01□□□□□ -0.65
SIK3-209ENST00000480222 CD36P16671 472 aa11.01□□□□□ -0.65
SIK3-209ENST00000480222 ZNF32P17041 273 aa11.01□□□□□ -0.65
SIK3-209ENST00000480222 BMP5P22003 454 aa11.01□□□□□ -0.65
SIK3-209ENST00000480222 HSD11B1P28845 292 aa11.01□□□□□ -0.65
SIK3-209ENST00000480222 GABRA5P31644 462 aa11.01□□□□□ -0.65
SIK3-209ENST00000480222 LIPAP38571 399 aa11.01□□□□□ -0.65
SIK3-209ENST00000480222 DOC2BQ14184 412 aa11.01□□□□□ -0.65
SIK3-209ENST00000480222 TAF13Q15543 124 aa11.01□□□□□ -0.65
SIK3-209ENST00000480222 TRAM1Q15629 374 aa11.01□□□□□ -0.65
SIK3-209ENST00000480222 SSX1Q16384 188 aa11.01□□□□□ -0.65
SIK3-209ENST00000480222 GABRA6Q16445 453 aa11.01□□□□□ -0.65
SIK3-209ENST00000480222 TMEM53Q6P2H8 277 aa11.01□□□□□ -0.65
SIK3-209ENST00000480222 MTFR2Q6P444 385 aa11.01□□□□□ -0.65
SIK3-209ENST00000480222 PHC2Q8IXK0 858 aa11.01□□□□□ -0.65
SIK3-209ENST00000480222 ZNF610Q8N9Z0 462 aa11.01□□□□□ -0.65
SIK3-209ENST00000480222 RAB2BQ8WUD1 216 aa11.01□□□□□ -0.65
SIK3-209ENST00000480222 TMIGD2Q96BF3 282 aa11.01□□□□□ -0.65
SIK3-209ENST00000480222 YIPF6Q96EC8 236 aa11.01□□□□□ -0.65
SIK3-209ENST00000480222 USB1Q9BQ65 265 aaKnown RBP11.01□□□□□ -0.65
SIK3-209ENST00000480222 OR2H1Q9GZK4 316 aa11.01□□□□□ -0.65
SIK3-209ENST00000480222 RBM38Q9H0Z9 239 aaKnown RBP11.01□□□□□ -0.65
SIK3-209ENST00000480222 CENPMQ9NSP4 180 aa11.01□□□□□ -0.65
SIK3-209ENST00000480222 ZNF224Q9NZL3 707 aa11.01□□□□□ -0.65
SIK3-209ENST00000480222 ST6GALNAC2Q9UJ37 374 aa11.01□□□□□ -0.65
SIK3-209ENST00000480222 ENPP5Q9UJA9 477 aa11.01□□□□□ -0.65
SIK3-209ENST00000480222 FBXL3Q9UKT7 428 aa11.01□□□□□ -0.65
SIK3-209ENST00000480222 R4GMQ9 66 aa11.01□□□□□ -0.65
SIK3-209ENST00000480222 A0A096LPE4 126 aa11□□□□□ -0.65
SIK3-209ENST00000480222 A0A1B0GUH1 482 aa11□□□□□ -0.65
SIK3-209ENST00000480222 A0A1W2PPZ6 126 aa11□□□□□ -0.65
SIK3-209ENST00000480222 CIB4A0PJX0 185 aa11□□□□□ -0.65
SIK3-209ENST00000480222 OR6C6A6NF89 314 aa11□□□□□ -0.65
SIK3-209ENST00000480222 A8MXE2 369 aa11□□□□□ -0.65
SIK3-209ENST00000480222 EEF1E1-BLOC1S5C9J1V9 151 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms