RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 LNX2Q8N448 690 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 LRRC17Q8N6Y2 441 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 FAM86B1Q8N7N1 296 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 KBTBD8Q8NFY9 601 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 OR2T29Q8NH02 315 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 OR52N5Q8NH56 324 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 PFN4Q8NHR9 129 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 NEU4Q8WWR8 484 aaPredicted RBP4.22□□□□□ -1.73
PTCD3-213ENST00000480102 TXNDC15Q96J42 360 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 C18orf12Q96KH6 178 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 TSPAN32Q96QS1 320 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 TNFRSF13CQ96RJ3 184 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 DDOQ99489 341 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 DOK1Q99704 481 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 KCNS3Q9BQ31 491 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 EMC6Q9BV81 110 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 KCNN2Q9H2S1 579 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 NOX3Q9HBY0 568 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 CYSLTR2Q9NS75 346 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 TBCCD1Q9NVR7 557 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 ARMC1Q9NVT9 282 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 TMEM160Q9NX00 188 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 SLCO1C1Q9NYB5 712 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 ZNF346Q9UL40 294 aaKnown RBP4.22□□□□□ -1.73
PTCD3-213ENST00000480102 PLEKHA6Q9Y2H5 1048 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 CDH10Q9Y6N8 788 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 DOCK7Q96N67 2140 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 INTS1Q8N201 2190 aaKnown RBP4.21□□□□□ -1.73
PTCD3-213ENST00000480102 MED12Q93074 2177 aa4.21□□□□□ -1.73
PTCD3-213ENST00000480102 HRNRQ86YZ3 2850 aaPredicted RBP4.21□□□□□ -1.73
PTCD3-213ENST00000480102 ANKRD17O75179 2603 aaKnown RBP4.21□□□□□ -1.74
PTCD3-213ENST00000480102 A0A0A6YYJ9 748 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 TRBV4-1A0A0J9YWV2 114 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 IQCMA0A1B0GVH7 501 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 LOC390937A0A1W2PQ73 354 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 DHRS12A0PJE2 317 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 OR6C6A6NF89 314 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 UNC119BA6NIH7 251 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 C12orf71A8MTZ7 269 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 J3KTA2 159 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 IFNL4K9M1U5 179 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 TNFRSF11BO00300 401 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 GYG2O15488 501 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 SYNGR3O43761 229 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 KHDRBS3O75525 346 aaKnown RBP4.21□□□□□ -1.74
PTCD3-213ENST00000480102 APOL3O95236 402 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 PPP1R3DO95685 299 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 IGHV3-13P01766 116 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 ERCC1P07992 297 aaPredicted RBP4.21□□□□□ -1.74
PTCD3-213ENST00000480102 CLEC2LP0C7M8 214 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 FCGR1AP12314 374 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 CD99P14209 185 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 NCK1P16333 377 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 ZNF26P17031 533 aaPredicted RBP4.21□□□□□ -1.74
PTCD3-213ENST00000480102 MSR1P21757 451 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 LAP3P28838 519 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 OTX1P32242 354 aaPredicted RBP4.21□□□□□ -1.74
PTCD3-213ENST00000480102 ZNF83P51522 516 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 IDH3GP51553 393 aaPredicted RBP4.21□□□□□ -1.74
PTCD3-213ENST00000480102 ARHGDIAP52565 204 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 SLC25A1P53007 311 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 SELENOVP59797 346 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 SNRPD2P62316 118 aaKnown RBP4.21□□□□□ -1.74
PTCD3-213ENST00000480102 MS4A2Q01362 244 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 RUNX1T1Q06455 604 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 LOXL1Q08397 574 aaPredicted RBP4.21□□□□□ -1.74
PTCD3-213ENST00000480102 FOXL1Q12952 345 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 AQP6Q13520 282 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 KRR1Q13601 381 aaKnown RBP4.21□□□□□ -1.74
PTCD3-213ENST00000480102 RIN1Q13671 783 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 FLOT2Q14254 428 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 SEC23BQ15437 767 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 TSC22D1Q15714 1073 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 ADIPOQQ15848 244 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 TBC1D28Q2M2D7 210 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 SLC36A3Q495N2 470 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 MESTQ5EB52 335 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 FGD3Q5JSP0 725 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 PHYHD1Q5SRE7 291 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 PGBD2Q6P3X8 592 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 RINLQ6ZS11 566 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 COLCA1Q6ZS62 124 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 ASRGL1Q7L266 308 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 KRT74Q7RTS7 529 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 SLC16A14Q7RTX9 510 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 YTHDF3Q7Z739 585 aaKnown RBP4.21□□□□□ -1.74
PTCD3-213ENST00000480102 MDP1Q86V88 176 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 LYSMD2Q8IV50 215 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 ZNF584Q8IVC4 421 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 P3H2Q8IVL5 708 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 SKA3Q8IX90 412 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 ADGRG5Q8IZF4 528 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 NPEPL1Q8NDH3 523 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 OR2T33Q8NG76 320 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 MOSPD2Q8NHP6 518 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 GNPDA2Q8TDQ7 276 aa4.21□□□□□ -1.74
PTCD3-213ENST00000480102 HDAC2Q92769 488 aaKnown RBP4.21□□□□□ -1.74
PTCD3-213ENST00000480102 MRPL24Q96A35 216 aaKnown RBP4.21□□□□□ -1.74
PTCD3-213ENST00000480102 ZC3HAV1LQ96H79 300 aaKnown RBP4.21□□□□□ -1.74
PTCD3-213ENST00000480102 RSRC1Q96IZ7 334 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms