RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 KCNS3Q9BQ31 491 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 ABHD6Q9BV23 337 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 HDHD2Q9H0R4 259 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 CENPMQ9NSP4 180 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 MRPS18AQ9NVS2 196 aaKnown RBP9.73□□□□□ -0.85
CLDN11-205ENST00000480067 SCN3BQ9NY72 215 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 PLEKHB1Q9UF11 243 aaPredicted RBP9.73□□□□□ -0.85
CLDN11-205ENST00000480067 KCNN3Q9UGI6 736 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 LRRC42Q9Y546 428 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 HCFC1P51610 2035 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.72□□□□□ -0.85
CLDN11-205ENST00000480067 IRGMA1A4Y4 181 aa9.72□□□□□ -0.85
CLDN11-205ENST00000480067 C5orf49A4QMS7 147 aa9.72□□□□□ -0.85
CLDN11-205ENST00000480067 DPRXA6NFQ7 191 aa9.72□□□□□ -0.85
CLDN11-205ENST00000480067 ZNF670-ZNF695F2Z2N8 137 aa9.72□□□□□ -0.85
CLDN11-205ENST00000480067 XPNPEP2O43895 674 aa9.72□□□□□ -0.85
CLDN11-205ENST00000480067 FAM20BO75063 409 aa9.72□□□□□ -0.85
CLDN11-205ENST00000480067 CRYAAP02489 173 aa9.72□□□□□ -0.85
CLDN11-205ENST00000480067 CELA3BP08861 270 aa9.72□□□□□ -0.85
CLDN11-205ENST00000480067 CECR9P0C854 216 aa9.72□□□□□ -0.85
CLDN11-205ENST00000480067 PSKH1P11801 424 aa9.72□□□□□ -0.85
CLDN11-205ENST00000480067 CD40P25942 277 aa9.72□□□□□ -0.85
CLDN11-205ENST00000480067 SLC15A1P46059 708 aa9.72□□□□□ -0.85
CLDN11-205ENST00000480067 HTR5AP47898 357 aa9.72□□□□□ -0.85
CLDN11-205ENST00000480067 GDI2P50395 445 aaKnown RBP9.72□□□□□ -0.85
CLDN11-205ENST00000480067 NR1H2P55055 460 aa9.72□□□□□ -0.85
CLDN11-205ENST00000480067 ACTC1P68032 377 aa9.72□□□□□ -0.85
CLDN11-205ENST00000480067 ACTA1P68133 377 aa9.72□□□□□ -0.85
CLDN11-205ENST00000480067 BSPH1Q075Z2 132 aa9.72□□□□□ -0.85
CLDN11-205ENST00000480067 RAB35Q15286 201 aa9.72□□□□□ -0.85
CLDN11-205ENST00000480067 TBC1D28Q2M2D7 210 aa9.72□□□□□ -0.85
CLDN11-205ENST00000480067 LAIR2Q6ISS4 152 aa9.72□□□□□ -0.85
CLDN11-205ENST00000480067 KCTD18Q6PI47 426 aaPredicted RBP9.72□□□□□ -0.85
CLDN11-205ENST00000480067 SEZ6L2Q6UXD5 910 aa9.72□□□□□ -0.85
CLDN11-205ENST00000480067 SPATC1Q76KD6 591 aa9.72□□□□□ -0.85
CLDN11-205ENST00000480067 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.72□□□□□ -0.85
CLDN11-205ENST00000480067 OR1J2Q8NGS2 313 aa9.72□□□□□ -0.85
CLDN11-205ENST00000480067 ST7LQ8TDW4 575 aa9.72□□□□□ -0.85
CLDN11-205ENST00000480067 ASB17Q8WXJ9 295 aa9.72□□□□□ -0.85
CLDN11-205ENST00000480067 SLAMF6Q96DU3 332 aa9.72□□□□□ -0.85
CLDN11-205ENST00000480067 PLPPR2Q96GM1 343 aa9.72□□□□□ -0.85
CLDN11-205ENST00000480067 ZNF75AQ96N20 296 aa9.72□□□□□ -0.85
CLDN11-205ENST00000480067 TBX5Q99593 518 aa9.72□□□□□ -0.85
CLDN11-205ENST00000480067 ATF6BQ99941 703 aa9.72□□□□□ -0.85
CLDN11-205ENST00000480067 PLCXD1Q9NUJ7 323 aa9.72□□□□□ -0.85
CLDN11-205ENST00000480067 EXOGQ9Y2C4 368 aaKnown RBP9.72□□□□□ -0.85
CLDN11-205ENST00000480067 CELSR2Q9HCU4 2923 aa9.72□□□□□ -0.85
CLDN11-205ENST00000480067 A0A1W2PQL4 384 aaPredicted RBP9.71□□□□□ -0.85
CLDN11-205ENST00000480067 DAPL1A0PJW8 107 aa9.71□□□□□ -0.85
CLDN11-205ENST00000480067 OR6C6A6NF89 314 aa9.71□□□□□ -0.85
CLDN11-205ENST00000480067 EFCAB10A6NFE3 127 aa9.71□□□□□ -0.85
CLDN11-205ENST00000480067 PTGES3LE9PB15 166 aa9.71□□□□□ -0.85
CLDN11-205ENST00000480067 PHYHO14832 338 aa9.71□□□□□ -0.85
CLDN11-205ENST00000480067 SYNGR3O43761 229 aa9.71□□□□□ -0.85
CLDN11-205ENST00000480067 COX5BP10606 129 aa9.71□□□□□ -0.85
CLDN11-205ENST00000480067 CCL2P13500 99 aa9.71□□□□□ -0.85
CLDN11-205ENST00000480067 COL8A1P27658 744 aa9.71□□□□□ -0.85
CLDN11-205ENST00000480067 GALK2Q01415 458 aa9.71□□□□□ -0.85
CLDN11-205ENST00000480067 NAAAQ02083 359 aa9.71□□□□□ -0.85
CLDN11-205ENST00000480067 DAZAP2Q15038 168 aaPredicted RBP9.71□□□□□ -0.85
CLDN11-205ENST00000480067 RHOUQ7L0Q8 258 aa9.71□□□□□ -0.85
CLDN11-205ENST00000480067 MYPOPQ86VE0 399 aaPredicted RBP9.71□□□□□ -0.85
CLDN11-205ENST00000480067 ZNF786Q8N393 782 aa9.71□□□□□ -0.85
CLDN11-205ENST00000480067 ACBD7Q8N6N7 88 aa9.71□□□□□ -0.85
CLDN11-205ENST00000480067 ZNF540Q8NDQ6 660 aa9.71□□□□□ -0.85
CLDN11-205ENST00000480067 OR52I1Q8NGK6 324 aa9.71□□□□□ -0.85
CLDN11-205ENST00000480067 RNF133Q8WVZ7 376 aa9.71□□□□□ -0.85
CLDN11-205ENST00000480067 GGHQ92820 318 aa9.71□□□□□ -0.85
CLDN11-205ENST00000480067 PIK3IP1Q96FE7 263 aa9.71□□□□□ -0.85
CLDN11-205ENST00000480067 RADILQ96JH8 1075 aa9.71□□□□□ -0.85
CLDN11-205ENST00000480067 MYCBPQ99417 103 aaPredicted RBP9.71□□□□□ -0.85
CLDN11-205ENST00000480067 COPS4Q9BT78 406 aa9.71□□□□□ -0.85
CLDN11-205ENST00000480067 MROQ9BYG7 248 aa9.71□□□□□ -0.85
CLDN11-205ENST00000480067 PSORS1C1Q9UIG5 152 aa9.71□□□□□ -0.85
CLDN11-205ENST00000480067 ATPIF1Q9UII2 106 aa9.71□□□□□ -0.85
CLDN11-205ENST00000480067 METRNQ9UJH8 293 aa9.71□□□□□ -0.85
CLDN11-205ENST00000480067 KLHDC2Q9Y2U9 406 aa9.71□□□□□ -0.85
CLDN11-205ENST00000480067 ICE1Q9Y2F5 2266 aa9.71□□□□□ -0.85
CLDN11-205ENST00000480067 TACC2O95359 2948 aa9.71□□□□□ -0.85
CLDN11-205ENST00000480067 LOC100509620A0A075B734 347 aa9.71□□□□□ -0.86
CLDN11-205ENST00000480067 A6NNC1 897 aa9.71□□□□□ -0.86
CLDN11-205ENST00000480067 DEFB108AA8MXU0 73 aa9.71□□□□□ -0.86
CLDN11-205ENST00000480067 ZNF878C9JN71 531 aa9.71□□□□□ -0.86
CLDN11-205ENST00000480067 F5H5K5 113 aa9.71□□□□□ -0.86
CLDN11-205ENST00000480067 J3QRE1 110 aa9.71□□□□□ -0.86
CLDN11-205ENST00000480067 SLC1A7O00341 560 aa9.71□□□□□ -0.86
CLDN11-205ENST00000480067 ABCD4O14678 606 aa9.71□□□□□ -0.86
CLDN11-205ENST00000480067 CD3EP07766 207 aa9.71□□□□□ -0.86
CLDN11-205ENST00000480067 H2BFMP0C1H6 154 aa9.71□□□□□ -0.86
CLDN11-205ENST00000480067 CCDC159P0C7I6 412 aa9.71□□□□□ -0.86
CLDN11-205ENST00000480067 DCKP27707 260 aa9.71□□□□□ -0.86
CLDN11-205ENST00000480067 ST3GAL4Q11206 333 aa9.71□□□□□ -0.86
CLDN11-205ENST00000480067 NCMAPQ5T1S8 102 aa9.71□□□□□ -0.86
CLDN11-205ENST00000480067 ARL9Q6T311 187 aa9.71□□□□□ -0.86
CLDN11-205ENST00000480067 SLC22A25Q6T423 547 aa9.71□□□□□ -0.86
CLDN11-205ENST00000480067 ZNF322Q6U7Q0 402 aaPredicted RBP9.71□□□□□ -0.86
CLDN11-205ENST00000480067 KRT77Q7Z794 578 aa9.71□□□□□ -0.86
CLDN11-205ENST00000480067 STX19Q8N4C7 294 aa9.71□□□□□ -0.86
CLDN11-205ENST00000480067 OR10S1Q8NGN2 331 aa9.71□□□□□ -0.86
CLDN11-205ENST00000480067 SNX33Q8WV41 574 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms