RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 PLPPR2Q96GM1 343 aa7.72□□□□□ -1.17
DDX56-211ENST00000479602 ZNF416Q9BWM5 594 aa7.72□□□□□ -1.17
DDX56-211ENST00000479602 YIPF3Q9GZM5 350 aa7.72□□□□□ -1.17
DDX56-211ENST00000479602 KCNN2Q9H2S1 579 aa7.72□□□□□ -1.17
DDX56-211ENST00000479602 RIBC2Q9H4K1 309 aa7.72□□□□□ -1.17
DDX56-211ENST00000479602 ESRP2Q9H6T0 727 aaKnown RBP7.72□□□□□ -1.17
DDX56-211ENST00000479602 ZNF442Q9H7R0 627 aa7.72□□□□□ -1.17
DDX56-211ENST00000479602 NIPAL2Q9H841 368 aa7.72□□□□□ -1.17
DDX56-211ENST00000479602 INPP5EQ9NRR6 644 aa7.72□□□□□ -1.17
DDX56-211ENST00000479602 PLCXD1Q9NUJ7 323 aa7.72□□□□□ -1.17
DDX56-211ENST00000479602 MRPL22Q9NWU5 206 aaKnown RBP7.72□□□□□ -1.17
DDX56-211ENST00000479602 IMPAD1Q9NX62 359 aa7.72□□□□□ -1.17
DDX56-211ENST00000479602 PCDHGB1Q9Y5G3 927 aa7.72□□□□□ -1.17
DDX56-211ENST00000479602 TIMM10BQ9Y5J6 103 aa7.72□□□□□ -1.17
DDX56-211ENST00000479602 GMPPBQ9Y5P6 360 aa7.72□□□□□ -1.17
DDX56-211ENST00000479602 LHFPL6Q9Y693 200 aa7.72□□□□□ -1.17
DDX56-211ENST00000479602 TMEM14AQ9Y6G1 99 aa7.72□□□□□ -1.17
DDX56-211ENST00000479602 A0A096LNT2 108 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 IRGMA1A4Y4 181 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 CCDC182A6NF36 153 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 DPRXA6NFQ7 191 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 H7C1C5 153 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 J3QRE1 110 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 SMAD7O15105 426 aaKnown RBP7.71□□□□□ -1.18
DDX56-211ENST00000479602 SYNGR3O43761 229 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 RAB36O95755 333 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 TFP02787 698 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 POU1F1P28069 291 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 POLR2IP36954 125 aaKnown RBP7.71□□□□□ -1.18
DDX56-211ENST00000479602 SLC15A1P46059 708 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 CAPZA2P47755 286 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 RGS6P49758 472 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 ENTPD1P49961 510 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 LCN6P62502 163 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 RAB40BQ12829 278 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 MAD2L1BPQ15013 274 aaPredicted RBP7.71□□□□□ -1.18
DDX56-211ENST00000479602 RAB35Q15286 201 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 SLC35F1Q5T1Q4 408 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 RNLSQ5VYX0 342 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 CARD17Q5XLA6 110 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 SLC18B1Q6NT16 456 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 PLBD1Q6P4A8 553 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 UNQ6126/PRO20091Q6UXV3 157 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 COLCA1Q6ZS62 124 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 MEPCEQ7L2J0 689 aaKnown RBP7.71□□□□□ -1.18
DDX56-211ENST00000479602 SLC16A9Q7RTY1 509 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 ZNF584Q8IVC4 421 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 CPOQ8IVL8 374 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 ENTHD1Q8IYW4 607 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 ALDH16A1Q8IZ83 802 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 PROKR2Q8NFJ6 384 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 OR4F15Q8NGB8 312 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 OR1J2Q8NGS2 313 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 OTOSQ8NHW6 89 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 FAM81AQ8TBF8 368 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 ST7LQ8TDW4 575 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 TMEM171Q8WVE6 324 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 RNF133Q8WVZ7 376 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 ASB17Q8WXJ9 295 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 AKAP1Q92667 903 aaKnown RBP eCLIP7.71□□□□□ -1.18
DDX56-211ENST00000479602 FBXO17Q96EF6 278 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 COG8Q96MW5 612 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 IL4I1Q96RQ9 567 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 TEAD3Q99594 435 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 ZNF184Q99676 751 aaPredicted RBP7.71□□□□□ -1.18
DDX56-211ENST00000479602 HCAR1Q9BXC0 346 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 OR2H1Q9GZK4 316 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 CXorf56Q9H5V9 222 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 PNRC2Q9NPJ4 139 aaKnown RBP7.71□□□□□ -1.18
DDX56-211ENST00000479602 TVP23BQ9NYZ1 205 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 CNOT2Q9NZN8 540 aaKnown RBP7.71□□□□□ -1.18
DDX56-211ENST00000479602 NPAP1Q9NZP6 1156 aa7.71□□□□□ -1.18
DDX56-211ENST00000479602 COA3Q9Y2R0 106 aaPredicted RBP7.71□□□□□ -1.18
DDX56-211ENST00000479602 ZNF503-AS2A6NEH8 195 aa7.7□□□□□ -1.18
DDX56-211ENST00000479602 ACOD1A6NK06 481 aa7.7□□□□□ -1.18
DDX56-211ENST00000479602 TLX2O43763 284 aaPredicted RBP7.7□□□□□ -1.18
DDX56-211ENST00000479602 ZNF254O75437 659 aa7.7□□□□□ -1.18
DDX56-211ENST00000479602 WBP4O75554 376 aaKnown RBP7.7□□□□□ -1.18
DDX56-211ENST00000479602 IGHA1P01876 353 aa7.7□□□□□ -1.18
DDX56-211ENST00000479602 APOC1P02654 83 aa7.7□□□□□ -1.18
DDX56-211ENST00000479602 CCDC159P0C7I6 412 aa7.7□□□□□ -1.18
DDX56-211ENST00000479602 ZNF35P13682 527 aa7.7□□□□□ -1.18
DDX56-211ENST00000479602 ZNF32P17041 273 aa7.7□□□□□ -1.18
DDX56-211ENST00000479602 ALOX5APP20292 161 aa7.7□□□□□ -1.18
DDX56-211ENST00000479602 MYF6P23409 242 aa7.7□□□□□ -1.18
DDX56-211ENST00000479602 CD40P25942 277 aa7.7□□□□□ -1.18
DDX56-211ENST00000479602 GSTT1P30711 240 aa7.7□□□□□ -1.18
DDX56-211ENST00000479602 MTNR1AP48039 350 aa7.7□□□□□ -1.18
DDX56-211ENST00000479602 RPS23P62266 143 aaKnown RBP7.7□□□□□ -1.18
DDX56-211ENST00000479602 RAB1AP62820 205 aa7.7□□□□□ -1.18
DDX56-211ENST00000479602 ACTC1P68032 377 aa7.7□□□□□ -1.18
DDX56-211ENST00000479602 ACTA1P68133 377 aa7.7□□□□□ -1.18
DDX56-211ENST00000479602 ETFDHQ16134 617 aa7.7□□□□□ -1.18
DDX56-211ENST00000479602 HIKESHIQ53FT3 197 aa7.7□□□□□ -1.18
DDX56-211ENST00000479602 TMEM236Q5W0B7 351 aa7.7□□□□□ -1.18
DDX56-211ENST00000479602 ZNF544Q6NX49 715 aa7.7□□□□□ -1.18
DDX56-211ENST00000479602 KRT74Q7RTS7 529 aa7.7□□□□□ -1.18
DDX56-211ENST00000479602 DTX2Q86UW9 622 aa7.7□□□□□ -1.18
DDX56-211ENST00000479602 LSRQ86X29 649 aaPredicted RBP7.7□□□□□ -1.18
DDX56-211ENST00000479602 C8orf59Q8N0T1 100 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms