RNA–Protein interactions for RNA: ENST00000479537.5

BRAF-203, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 5

Gene BRAF, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-203ENST00000479537 ZNF133P52736 654 aaPredicted RBP3.71□□□□□ -1.82
BRAF-203ENST00000479537 RPS21P63220 83 aaKnown RBP3.71□□□□□ -1.82
BRAF-203ENST00000479537 ADARB1P78563 741 aaKnown RBP3.71□□□□□ -1.82
BRAF-203ENST00000479537 CKAP4Q07065 602 aaKnown RBP3.71□□□□□ -1.82
BRAF-203ENST00000479537 IL18Q14116 193 aa3.71□□□□□ -1.82
BRAF-203ENST00000479537 GUCA2BQ16661 112 aa3.71□□□□□ -1.82
BRAF-203ENST00000479537 REEP3Q6NUK4 255 aa3.71□□□□□ -1.82
BRAF-203ENST00000479537 SH2D6Q7Z4S9 175 aa3.71□□□□□ -1.82
BRAF-203ENST00000479537 ZNF429Q86V71 674 aa3.71□□□□□ -1.82
BRAF-203ENST00000479537 Q8N7P7 452 aa3.71□□□□□ -1.82
BRAF-203ENST00000479537 FBXL13Q8NEE6 735 aa3.71□□□□□ -1.82
BRAF-203ENST00000479537 BLOC1S5Q8TDH9 187 aa3.71□□□□□ -1.82
BRAF-203ENST00000479537 AURKBQ96GD4 344 aaPredicted RBP3.71□□□□□ -1.82
BRAF-203ENST00000479537 TGS1Q96RS0 853 aaKnown RBP3.71□□□□□ -1.82
BRAF-203ENST00000479537 DNTTIP1Q9H147 329 aa3.71□□□□□ -1.82
BRAF-203ENST00000479537 GEMIN7Q9H840 131 aaKnown RBP3.71□□□□□ -1.82
BRAF-203ENST00000479537 NYAP2Q9P242 653 aa3.71□□□□□ -1.82
BRAF-203ENST00000479537 CAB39Q9Y376 341 aaPredicted RBP3.71□□□□□ -1.82
BRAF-203ENST00000479537 LMO7Q8WWI1 1683 aa3.71□□□□□ -1.82
BRAF-203ENST00000479537 LTBP1Q14766 1721 aa3.7□□□□□ -1.82
BRAF-203ENST00000479537 FBN3Q75N90 2809 aa3.7□□□□□ -1.82
BRAF-203ENST00000479537 CENPFP49454 3210 aa3.7□□□□□ -1.82
BRAF-203ENST00000479537 PINLYPA6NC86 204 aa3.7□□□□□ -1.82
BRAF-203ENST00000479537 SIRPB1O00241 398 aa3.7□□□□□ -1.82
BRAF-203ENST00000479537 LAD1O00515 517 aa3.7□□□□□ -1.82
BRAF-203ENST00000479537 CASQ2O14958 399 aaPredicted RBP3.7□□□□□ -1.82
BRAF-203ENST00000479537 KMOO15229 486 aa3.7□□□□□ -1.82
BRAF-203ENST00000479537 SUPT3HO75486 399 aa3.7□□□□□ -1.82
BRAF-203ENST00000479537 AIFM1O95831 613 aa3.7□□□□□ -1.82
BRAF-203ENST00000479537 SLC25A27O95847 323 aa3.7□□□□□ -1.82
BRAF-203ENST00000479537 SERPINA5P05154 406 aa3.7□□□□□ -1.82
BRAF-203ENST00000479537 PLEKP08567 350 aaPredicted RBP3.7□□□□□ -1.82
BRAF-203ENST00000479537 ACSM4P0C7M7 580 aa3.7□□□□□ -1.82
BRAF-203ENST00000479537 IGHV3-43DP0DP04 118 aa3.7□□□□□ -1.82
BRAF-203ENST00000479537 UQCRFS1P47985 274 aa3.7□□□□□ -1.82
BRAF-203ENST00000479537 NMUP48645 174 aa3.7□□□□□ -1.82
BRAF-203ENST00000479537 MPPED2Q15777 294 aa3.7□□□□□ -1.82
BRAF-203ENST00000479537 ZSCAN26Q16670 478 aa3.7□□□□□ -1.82
BRAF-203ENST00000479537 KCTD19Q17RG1 926 aaPredicted RBP3.7□□□□□ -1.82
BRAF-203ENST00000479537 TMEM31Q5JXX7 168 aa3.7□□□□□ -1.82
BRAF-203ENST00000479537 CYB5R2Q6BCY4 276 aa3.7□□□□□ -1.82
BRAF-203ENST00000479537 TWF2Q6IBS0 349 aaKnown RBP3.7□□□□□ -1.82
BRAF-203ENST00000479537 LINC00173Q6ZV60 143 aa3.7□□□□□ -1.82
BRAF-203ENST00000479537 OFCC1Q8IZS5 231 aa3.7□□□□□ -1.82
BRAF-203ENST00000479537 OR10R2Q8NGX6 335 aa3.7□□□□□ -1.82
BRAF-203ENST00000479537 RNF138Q8WVD3 245 aa3.7□□□□□ -1.82
BRAF-203ENST00000479537 DCPSQ96C86 337 aaKnown RBP3.7□□□□□ -1.82
BRAF-203ENST00000479537 SERPINB12Q96P63 405 aa3.7□□□□□ -1.82
BRAF-203ENST00000479537 GSDMAQ96QA5 445 aa3.7□□□□□ -1.82
BRAF-203ENST00000479537 BPIFA3Q9BQP9 254 aa3.7□□□□□ -1.82
BRAF-203ENST00000479537 MTG1Q9BT17 334 aaPredicted RBP3.7□□□□□ -1.82
BRAF-203ENST00000479537 RACGAP1Q9H0H5 632 aa3.7□□□□□ -1.82
BRAF-203ENST00000479537 HRASLS2Q9NWW9 162 aa3.7□□□□□ -1.82
BRAF-203ENST00000479537 ANAPC11Q9NYG5 84 aa3.7□□□□□ -1.82
BRAF-203ENST00000479537 TP53TG5Q9Y2B4 290 aa3.7□□□□□ -1.82
BRAF-203ENST00000479537 E9PCH4 1651 aa3.7□□□□□ -1.82
BRAF-203ENST00000479537 SPTBN4Q9H254 2564 aa3.7□□□□□ -1.82
BRAF-203ENST00000479537 ITPR3Q14573 2671 aa3.7□□□□□ -1.82
BRAF-203ENST00000479537 KIF1BO60333 1816 aa3.7□□□□□ -1.82
BRAF-203ENST00000479537 IFT172Q9UG01 1749 aa3.7□□□□□ -1.82
BRAF-203ENST00000479537 SMG6Q86US8 1419 aaKnown RBP3.7□□□□□ -1.82
BRAF-203ENST00000479537 NFASCO94856 1347 aa3.7□□□□□ -1.82
BRAF-203ENST00000479537 LRRIQ4A6NIV6 560 aa3.69□□□□□ -1.82
BRAF-203ENST00000479537 CA11O75493 328 aa3.69□□□□□ -1.82
BRAF-203ENST00000479537 FGF4P08620 206 aa3.69□□□□□ -1.82
BRAF-203ENST00000479537 MYL2P10916 166 aa3.69□□□□□ -1.82
BRAF-203ENST00000479537 SFTPCP11686 197 aa3.69□□□□□ -1.82
BRAF-203ENST00000479537 NR2C1P13056 603 aa3.69□□□□□ -1.82
BRAF-203ENST00000479537 FOLR1P15328 257 aa3.69□□□□□ -1.82
BRAF-203ENST00000479537 ZNF250P15622 560 aa3.69□□□□□ -1.82
BRAF-203ENST00000479537 ZNF30P17039 623 aa3.69□□□□□ -1.82
BRAF-203ENST00000479537 DCKP27707 260 aa3.69□□□□□ -1.82
BRAF-203ENST00000479537 HMOX2P30519 316 aa3.69□□□□□ -1.82
BRAF-203ENST00000479537 RPS10P46783 165 aaKnown RBP3.69□□□□□ -1.82
BRAF-203ENST00000479537 CX3CR1P49238 355 aa3.69□□□□□ -1.82
BRAF-203ENST00000479537 NCBP2P52298 156 aaKnown RBP eCLIP3.69□□□□□ -1.82
BRAF-203ENST00000479537 LIPEQ05469 1076 aa3.69□□□□□ -1.82
BRAF-203ENST00000479537 SELENBP1Q13228 472 aa3.69□□□□□ -1.82
BRAF-203ENST00000479537 SF3A2Q15428 464 aaKnown RBP3.69□□□□□ -1.82
BRAF-203ENST00000479537 ZNF658BQ4V348 819 aaPredicted RBP3.69□□□□□ -1.82
BRAF-203ENST00000479537 VAX1Q5SQQ9 334 aa3.69□□□□□ -1.82
BRAF-203ENST00000479537 CCNJQ5T5M9 372 aa3.69□□□□□ -1.82
BRAF-203ENST00000479537 C1orf185Q5T7R7 199 aa3.69□□□□□ -1.82
BRAF-203ENST00000479537 CERS6Q6ZMG9 384 aa3.69□□□□□ -1.82
BRAF-203ENST00000479537 SSX9Q7RTT3 188 aa3.69□□□□□ -1.82
BRAF-203ENST00000479537 C6orf120Q7Z4R8 191 aa3.69□□□□□ -1.82
BRAF-203ENST00000479537 MKXQ8IYA7 352 aa3.69□□□□□ -1.82
BRAF-203ENST00000479537 IQCKQ8N0W5 287 aa3.69□□□□□ -1.82
BRAF-203ENST00000479537 ARIH2OSQ8N7S6 290 aa3.69□□□□□ -1.82
BRAF-203ENST00000479537 AGR3Q8TD06 166 aa3.69□□□□□ -1.82
BRAF-203ENST00000479537 ACTRT1Q8TDG2 376 aa3.69□□□□□ -1.82
BRAF-203ENST00000479537 FAM3DQ96BQ1 224 aa3.69□□□□□ -1.82
BRAF-203ENST00000479537 ECHDC3Q96DC8 303 aa3.69□□□□□ -1.82
BRAF-203ENST00000479537 PRRC1Q96M27 445 aa3.69□□□□□ -1.82
BRAF-203ENST00000479537 ZNF331Q9NQX6 463 aaPredicted RBP3.69□□□□□ -1.82
BRAF-203ENST00000479537 GPATCH2LQ9NWQ4 482 aa3.69□□□□□ -1.82
BRAF-203ENST00000479537 LYARQ9NX58 379 aaKnown RBP3.69□□□□□ -1.82
BRAF-203ENST00000479537 TUBGCP6Q96RT7 1819 aa3.69□□□□□ -1.82
BRAF-203ENST00000479537 CPSF1Q10570 1443 aaKnown RBP3.69□□□□□ -1.82
BRAF-203ENST00000479537 MUC6Q6W4X9 2439 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms