RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 NEU4Q8WWR8 484 aaPredicted RBP13.3□□□□□ -0.28
C9orf3-217ENST00000479161 LRTOMTQ8WZ04 291 aa13.3□□□□□ -0.28
C9orf3-217ENST00000479161 PTP4A1Q93096 173 aa13.3□□□□□ -0.28
C9orf3-217ENST00000479161 C4orf45Q96LM5 186 aa13.3□□□□□ -0.28
C9orf3-217ENST00000479161 MRPL37Q9BZE1 423 aaKnown RBP13.3□□□□□ -0.28
C9orf3-217ENST00000479161 RAB1BQ9H0U4 201 aa13.3□□□□□ -0.28
C9orf3-217ENST00000479161 FN3KQ9H479 309 aa13.3□□□□□ -0.28
C9orf3-217ENST00000479161 MARCH7Q9H992 704 aa13.3□□□□□ -0.28
C9orf3-217ENST00000479161 MRPL22Q9NWU5 206 aaKnown RBP13.3□□□□□ -0.28
C9orf3-217ENST00000479161 SLCO1C1Q9NYB5 712 aa13.3□□□□□ -0.28
C9orf3-217ENST00000479161 KIF17Q9P2E2 1029 aa13.3□□□□□ -0.28
C9orf3-217ENST00000479161 ZFHX3Q15911 3703 aa13.29□□□□□ -0.28
C9orf3-217ENST00000479161 H3BNX3 289 aa13.29□□□□□ -0.28
C9orf3-217ENST00000479161 PRODHO43272 600 aa13.29□□□□□ -0.28
C9orf3-217ENST00000479161 IGHV3-13P01766 116 aa13.29□□□□□ -0.28
C9orf3-217ENST00000479161 ERCC1P07992 297 aaPredicted RBP13.29□□□□□ -0.28
C9orf3-217ENST00000479161 CCL2P13500 99 aa13.29□□□□□ -0.28
C9orf3-217ENST00000479161 ZNF823P16415 610 aa13.29□□□□□ -0.28
C9orf3-217ENST00000479161 ZNF23P17027 643 aa13.29□□□□□ -0.28
C9orf3-217ENST00000479161 LIPAP38571 399 aa13.29□□□□□ -0.28
C9orf3-217ENST00000479161 WNT5AP41221 380 aa13.29□□□□□ -0.28
C9orf3-217ENST00000479161 MSMPQ1L6U9 139 aa13.29□□□□□ -0.28
C9orf3-217ENST00000479161 ZNF718Q3SXZ3 478 aa13.29□□□□□ -0.28
C9orf3-217ENST00000479161 LINC01590Q5TEZ4 76 aa13.29□□□□□ -0.28
C9orf3-217ENST00000479161 OR2AJ1Q8NGZ0 328 aa13.29□□□□□ -0.28
C9orf3-217ENST00000479161 SYNPRQ8TBG9 265 aa13.29□□□□□ -0.28
C9orf3-217ENST00000479161 MARS2Q96GW9 593 aaKnown RBP13.29□□□□□ -0.28
C9orf3-217ENST00000479161 CDADC1Q9BWV3 514 aa13.29□□□□□ -0.28
C9orf3-217ENST00000479161 PRRG3Q9BZD7 231 aa13.29□□□□□ -0.28
C9orf3-217ENST00000479161 CGGBP1Q9UFW8 167 aaPredicted RBP13.29□□□□□ -0.28
C9orf3-217ENST00000479161 POLR1DQ9Y2S0 133 aa13.29□□□□□ -0.28
C9orf3-217ENST00000479161 RRP15Q9Y3B9 282 aaKnown RBP13.29□□□□□ -0.28
C9orf3-217ENST00000479161 M0R233 179 aa13.28□□□□□ -0.28
C9orf3-217ENST00000479161 RER1O15258 196 aa13.28□□□□□ -0.28
C9orf3-217ENST00000479161 GLCEO94923 617 aa13.28□□□□□ -0.28
C9orf3-217ENST00000479161 POU1F1P28069 291 aa13.28□□□□□ -0.28
C9orf3-217ENST00000479161 HTR5AP47898 357 aa13.28□□□□□ -0.28
C9orf3-217ENST00000479161 KLF3P57682 345 aaPredicted RBP13.28□□□□□ -0.28
C9orf3-217ENST00000479161 EFNB1P98172 346 aa13.28□□□□□ -0.28
C9orf3-217ENST00000479161 PPP2R2BQ00005 443 aa13.28□□□□□ -0.28
C9orf3-217ENST00000479161 PTGES3Q15185 160 aaKnown RBP13.28□□□□□ -0.28
C9orf3-217ENST00000479161 CLEC12BQ2HXU8 276 aa13.28□□□□□ -0.28
C9orf3-217ENST00000479161 SLC35D3Q5M8T2 416 aa13.28□□□□□ -0.28
C9orf3-217ENST00000479161 COLCA1Q6ZS62 124 aa13.28□□□□□ -0.28
C9orf3-217ENST00000479161 AMIGO2Q86SJ2 522 aa13.28□□□□□ -0.28
C9orf3-217ENST00000479161 ZNF101Q8IZC7 436 aa13.28□□□□□ -0.28
C9orf3-217ENST00000479161 OR1J1Q8NGS3 322 aa13.28□□□□□ -0.28
C9orf3-217ENST00000479161 PYDC1Q8WXC3 89 aa13.28□□□□□ -0.28
C9orf3-217ENST00000479161 FOXN4Q96NZ1 517 aa13.28□□□□□ -0.28
C9orf3-217ENST00000479161 RBM4BQ9BQ04 359 aaKnown RBP13.28□□□□□ -0.28
C9orf3-217ENST00000479161 KRT84Q9NSB2 600 aa13.28□□□□□ -0.28
C9orf3-217ENST00000479161 DDX28Q9NUL7 540 aaKnown RBP13.28□□□□□ -0.28
C9orf3-217ENST00000479161 NKIRAS2Q9NYR9 191 aa13.28□□□□□ -0.28
C9orf3-217ENST00000479161 GDF2Q9UK05 429 aaPredicted RBP13.28□□□□□ -0.28
C9orf3-217ENST00000479161 COMMD3-BMI1R4GMX3 469 aa13.28□□□□□ -0.28
C9orf3-217ENST00000479161 FAM171A2A8MVW0 826 aa13.27□□□□□ -0.29
C9orf3-217ENST00000479161 PRR23D1E9PI22 279 aaPredicted RBP13.27□□□□□ -0.29
C9orf3-217ENST00000479161 NDUFS8O00217 210 aa13.27□□□□□ -0.29
C9orf3-217ENST00000479161 HLA-DQA2P01906 255 aa13.27□□□□□ -0.29
C9orf3-217ENST00000479161 LCKP06239 509 aa13.27□□□□□ -0.29
C9orf3-217ENST00000479161 FAM157BP0CG42 384 aa13.27□□□□□ -0.29
C9orf3-217ENST00000479161 PRR23D2P0DMB1 279 aaPredicted RBP13.27□□□□□ -0.29
C9orf3-217ENST00000479161 CCNOP22674 350 aa13.27□□□□□ -0.29
C9orf3-217ENST00000479161 OTX1P32242 354 aaPredicted RBP13.27□□□□□ -0.29
C9orf3-217ENST00000479161 PYCR1P32322 319 aa13.27□□□□□ -0.29
C9orf3-217ENST00000479161 ENTPD1P49961 510 aa13.27□□□□□ -0.29
C9orf3-217ENST00000479161 MRPS11P82912 194 aaKnown RBP13.27□□□□□ -0.29
C9orf3-217ENST00000479161 MEP1BQ16820 701 aa13.27□□□□□ -0.29
C9orf3-217ENST00000479161 RSPO1Q2MKA7 263 aaPredicted RBP13.27□□□□□ -0.29
C9orf3-217ENST00000479161 FAM209AQ5JX71 171 aa13.27□□□□□ -0.29
C9orf3-217ENST00000479161 ZNRF4Q8WWF5 429 aa13.27□□□□□ -0.29
C9orf3-217ENST00000479161 C18orf12Q96KH6 178 aa13.27□□□□□ -0.29
C9orf3-217ENST00000479161 Q96MF0 132 aa13.27□□□□□ -0.29
C9orf3-217ENST00000479161 PNRC2Q9NPJ4 139 aaKnown RBP13.27□□□□□ -0.29
C9orf3-217ENST00000479161 TMEFF2Q9UIK5 374 aaPredicted RBP13.27□□□□□ -0.29
C9orf3-217ENST00000479161 OAZ3Q9UMX2 235 aa13.27□□□□□ -0.29
C9orf3-217ENST00000479161 ZAR1LA6NP61 321 aa13.26□□□□□ -0.29
C9orf3-217ENST00000479161 NDUFS7O75251 213 aa13.26□□□□□ -0.29
C9orf3-217ENST00000479161 ABHD16AO95870 558 aa13.26□□□□□ -0.29
C9orf3-217ENST00000479161 GPANK1O95872 356 aa13.26□□□□□ -0.29
C9orf3-217ENST00000479161 MT-ND5P03915 603 aa13.26□□□□□ -0.29
C9orf3-217ENST00000479161 ADH4P08319 380 aa13.26□□□□□ -0.29
C9orf3-217ENST00000479161 GCH1P30793 250 aa13.26□□□□□ -0.29
C9orf3-217ENST00000479161 NUDT6P53370 316 aa13.26□□□□□ -0.29
C9orf3-217ENST00000479161 PPP1CBP62140 327 aa13.26□□□□□ -0.29
C9orf3-217ENST00000479161 PCGF3Q3KNV8 242 aa13.26□□□□□ -0.29
C9orf3-217ENST00000479161 SLX4IPQ5VYV7 408 aa13.26□□□□□ -0.29
C9orf3-217ENST00000479161 CSPG4Q6UVK1 2322 aa13.26□□□□□ -0.29
C9orf3-217ENST00000479161 CLEC2AQ6UVW9 174 aa13.26□□□□□ -0.29
C9orf3-217ENST00000479161 SHFQ7M4L6 423 aa13.26□□□□□ -0.29
C9orf3-217ENST00000479161 IQCF1Q8N6M8 205 aa13.26□□□□□ -0.29
C9orf3-217ENST00000479161 OR5L1Q8NGL2 311 aa13.26□□□□□ -0.29
C9orf3-217ENST00000479161 OR9Q1Q8NGQ5 310 aa13.26□□□□□ -0.29
C9orf3-217ENST00000479161 KLF14Q8TD94 323 aaPredicted RBP13.26□□□□□ -0.29
C9orf3-217ENST00000479161 APOBEC3DQ96AK3 386 aaPredicted RBP13.26□□□□□ -0.29
C9orf3-217ENST00000479161 PLEKHA8Q96JA3 519 aa13.26□□□□□ -0.29
C9orf3-217ENST00000479161 COX4I2Q96KJ9 171 aa13.26□□□□□ -0.29
C9orf3-217ENST00000479161 SORCS2Q96PQ0 1159 aa13.26□□□□□ -0.29
C9orf3-217ENST00000479161 ATF6BQ99941 703 aa13.26□□□□□ -0.29
C9orf3-217ENST00000479161 C1QTNF5Q9BXJ0 243 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms