RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 CCDC90BQ9GZT6 254 aa11.41□□□□□ -0.58
CHD3-210ENST00000479080 NPDC1Q9NQX5 325 aaPredicted RBP11.41□□□□□ -0.58
CHD3-210ENST00000479080 INPP5EQ9NRR6 644 aa11.41□□□□□ -0.58
CHD3-210ENST00000479080 DDX28Q9NUL7 540 aaKnown RBP11.41□□□□□ -0.58
CHD3-210ENST00000479080 ACOXLQ9NUZ1 547 aa11.41□□□□□ -0.58
CHD3-210ENST00000479080 ELOVL5Q9NYP7 299 aa11.41□□□□□ -0.58
CHD3-210ENST00000479080 NPAP1Q9NZP6 1156 aa11.41□□□□□ -0.58
CHD3-210ENST00000479080 LAMP5Q9UJQ1 280 aa11.41□□□□□ -0.58
CHD3-210ENST00000479080 POLR1DQ9Y2S0 133 aa11.41□□□□□ -0.58
CHD3-210ENST00000479080 GRIP1Q9Y3R0 1128 aa11.41□□□□□ -0.58
CHD3-210ENST00000479080 PCDHGB1Q9Y5G3 927 aa11.41□□□□□ -0.58
CHD3-210ENST00000479080 SIRT4Q9Y6E7 314 aaPredicted RBP11.41□□□□□ -0.58
CHD3-210ENST00000479080 MYO7BQ6PIF6 2116 aa11.41□□□□□ -0.58
CHD3-210ENST00000479080 LOC100509620A0A075B734 347 aa11.4□□□□□ -0.58
CHD3-210ENST00000479080 FARS2O95363 451 aaKnown RBP11.4□□□□□ -0.58
CHD3-210ENST00000479080 DBHP09172 617 aa11.4□□□□□ -0.58
CHD3-210ENST00000479080 PLA2G2AP14555 144 aa11.4□□□□□ -0.58
CHD3-210ENST00000479080 MFGE8Q08431 387 aaPredicted RBP11.4□□□□□ -0.58
CHD3-210ENST00000479080 SNTB1Q13884 538 aaKnown RBP11.4□□□□□ -0.58
CHD3-210ENST00000479080 RAB39AQ14964 217 aa11.4□□□□□ -0.58
CHD3-210ENST00000479080 RAB35Q15286 201 aa11.4□□□□□ -0.58
CHD3-210ENST00000479080 TAB1Q15750 504 aa11.4□□□□□ -0.58
CHD3-210ENST00000479080 ELFN2Q5R3F8 820 aa11.4□□□□□ -0.58
CHD3-210ENST00000479080 ZNF808Q8N4W9 903 aaPredicted RBP11.4□□□□□ -0.58
CHD3-210ENST00000479080 OR52N1Q8NH53 320 aa11.4□□□□□ -0.58
CHD3-210ENST00000479080 PELI1Q96FA3 418 aa11.4□□□□□ -0.58
CHD3-210ENST00000479080 MS4A3Q96HJ5 214 aa11.4□□□□□ -0.58
CHD3-210ENST00000479080 C4orf36Q96KX1 117 aa11.4□□□□□ -0.58
CHD3-210ENST00000479080 C1orf198Q9H425 327 aa11.4□□□□□ -0.58
CHD3-210ENST00000479080 COQ3Q9NZJ6 369 aa11.4□□□□□ -0.58
CHD3-210ENST00000479080 LRP12Q9Y561 859 aa11.4□□□□□ -0.58
CHD3-210ENST00000479080 UBR5O95071 2799 aaPredicted RBP11.4□□□□□ -0.58
CHD3-210ENST00000479080 A0A087WXM4 84 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 CLEC18AA5D8T8 446 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 WIPF3A6NGB9 483 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 C19orf84I3L1E1 186 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 SGCEO43556 437 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 DOK2O60496 412 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 UBL3O95164 117 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 PNPP00491 289 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 IGLV1-44P01699 117 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 TFAP2AP05549 437 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 CD79AP11912 226 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 ATP6V1B1P15313 513 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 ZNF14P17017 642 aaPredicted RBP11.39□□□□□ -0.59
CHD3-210ENST00000479080 AGAP20933 346 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 IL32P24001 234 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 OTX1P32242 354 aaPredicted RBP11.39□□□□□ -0.59
CHD3-210ENST00000479080 PSMB10P40306 273 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 GP2P55259 537 aaKnown RBP11.39□□□□□ -0.59
CHD3-210ENST00000479080 RAB1AP62820 205 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 TGFBR3Q03167 851 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 EGR3Q06889 387 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 SCRN3Q0VDG4 424 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 TIMM23BQ5SRD1 257 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 UBE2UQ5VVX9 321 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 OR7E24Q6IFN5 339 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 MTFR2Q6P444 385 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 CLEC18BQ6UXF7 455 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 KCTD8Q6ZWB6 473 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 PRSS45Q7RTY3 260 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 ZNF679Q8IYX0 411 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 SYS1Q8N2H4 156 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 PAQR4Q8N4S7 273 aaPredicted RBP11.39□□□□□ -0.59
CHD3-210ENST00000479080 CLEC18CQ8NCF0 446 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 GJC3Q8NFK1 279 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 OR2AJ1Q8NGZ0 328 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 ASB17Q8WXJ9 295 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 RNASE6Q93091 150 aaKnown RBP11.39□□□□□ -0.59
CHD3-210ENST00000479080 MUL1Q969V5 352 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 PPP1R14AQ96A00 147 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 OPALINQ96PE5 141 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 WACQ9BTA9 647 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 CDADC1Q9BWV3 514 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 ELOVL3Q9HB03 270 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 CRNNQ9UBG3 495 aaPredicted RBP11.39□□□□□ -0.59
CHD3-210ENST00000479080 ST6GALNAC2Q9UJ37 374 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 CAB39Q9Y376 341 aaPredicted RBP11.39□□□□□ -0.59
CHD3-210ENST00000479080 TIMM10BQ9Y5J6 103 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 TMEM14AQ9Y6G1 99 aa11.39□□□□□ -0.59
CHD3-210ENST00000479080 UNC79Q9P2D8 2635 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 IGHV1-18A0A0C4DH31 117 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 METTL15A6NJ78 407 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 ZNF878C9JN71 531 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 C16orf97H3BN30 126 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 J3QLW9 94 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 PHYHO14832 338 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 INMTO95050 263 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 CLDN14O95500 239 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 IGKV3-15P01624 115 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 HOXB1P14653 301 aaPredicted RBP11.38□□□□□ -0.59
CHD3-210ENST00000479080 ZNF19P17023 458 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 MYL12AP19105 171 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 APEX1P27695 318 aaKnown RBP11.38□□□□□ -0.59
CHD3-210ENST00000479080 GUCA1AP43080 201 aaPredicted RBP11.38□□□□□ -0.59
CHD3-210ENST00000479080 KIR3DL2P43630 455 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 CAPZA2P47755 286 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 ALDH3B2P48448 385 aa11.38□□□□□ -0.59
CHD3-210ENST00000479080 GTF2A1P52655 376 aaPredicted RBP11.38□□□□□ -0.59
CHD3-210ENST00000479080 NANOS3P60323 173 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms