RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 NUDT6P53370 316 aa17.63■□□□□ 0.41
VARS-224ENST00000479051 HIST1H3AP68431 136 aa17.63■□□□□ 0.41
VARS-224ENST00000479051 DBPQ10586 325 aaPredicted RBP17.63■□□□□ 0.41
VARS-224ENST00000479051 ECH1Q13011 328 aa17.63■□□□□ 0.41
VARS-224ENST00000479051 PTGES3Q15185 160 aaKnown RBP17.63■□□□□ 0.41
VARS-224ENST00000479051 SNAPC1Q16533 368 aa17.63■□□□□ 0.41
VARS-224ENST00000479051 CCDC92Q53HC0 331 aaPredicted RBP17.63■□□□□ 0.41
VARS-224ENST00000479051 HIST2H3PS2Q5TEC6 136 aa17.63■□□□□ 0.41
VARS-224ENST00000479051 TMEM236Q5W0B7 351 aa17.63■□□□□ 0.41
VARS-224ENST00000479051 SLC18B1Q6NT16 456 aa17.63■□□□□ 0.41
VARS-224ENST00000479051 PLBD1Q6P4A8 553 aa17.63■□□□□ 0.41
VARS-224ENST00000479051 CORO6Q6QEF8 472 aa17.63■□□□□ 0.41
VARS-224ENST00000479051 HIST2H3AQ71DI3 136 aa17.63■□□□□ 0.41
VARS-224ENST00000479051 LINC00346Q8IVM7 164 aa17.63■□□□□ 0.41
VARS-224ENST00000479051 ABHD4Q8TB40 342 aa17.63■□□□□ 0.41
VARS-224ENST00000479051 SYNPRQ8TBG9 265 aa17.63■□□□□ 0.41
VARS-224ENST00000479051 CIB1Q99828 191 aa17.63■□□□□ 0.41
VARS-224ENST00000479051 VRK1Q99986 396 aaPredicted RBP17.63■□□□□ 0.41
VARS-224ENST00000479051 MRPL37Q9BZE1 423 aaKnown RBP17.63■□□□□ 0.41
VARS-224ENST00000479051 OR51V1Q9H2C8 321 aa17.63■□□□□ 0.41
VARS-224ENST00000479051 TVP23BQ9NYZ1 205 aa17.63■□□□□ 0.41
VARS-224ENST00000479051 DUSP13Q9UII6 198 aa17.63■□□□□ 0.41
VARS-224ENST00000479051 COMMD3-BMI1R4GMX3 469 aa17.63■□□□□ 0.41
VARS-224ENST00000479051 A0A1W2PPW3 197 aa17.62■□□□□ 0.41
VARS-224ENST00000479051 ICMTO60725 284 aa17.62■□□□□ 0.41
VARS-224ENST00000479051 GLCEO94923 617 aa17.62■□□□□ 0.41
VARS-224ENST00000479051 IGHV4-39P01824 125 aa17.62■□□□□ 0.41
VARS-224ENST00000479051 CLUP10909 449 aa17.62■□□□□ 0.41
VARS-224ENST00000479051 GCH1P30793 250 aa17.62■□□□□ 0.41
VARS-224ENST00000479051 GGT2P36268 569 aa17.62■□□□□ 0.41
VARS-224ENST00000479051 ENTPD1P49961 510 aa17.62■□□□□ 0.41
VARS-224ENST00000479051 KLF3P57682 345 aaPredicted RBP17.62■□□□□ 0.41
VARS-224ENST00000479051 PPP2R2BQ00005 443 aa17.62■□□□□ 0.41
VARS-224ENST00000479051 MOGQ16653 247 aa17.62■□□□□ 0.41
VARS-224ENST00000479051 ZNF718Q3SXZ3 478 aa17.62■□□□□ 0.41
VARS-224ENST00000479051 WFDC11Q8NEX6 87 aa17.62■□□□□ 0.41
VARS-224ENST00000479051 COG8Q96MW5 612 aa17.62■□□□□ 0.41
VARS-224ENST00000479051 DOK1Q99704 481 aa17.62■□□□□ 0.41
VARS-224ENST00000479051 SYT3Q9BQG1 590 aa17.62■□□□□ 0.41
VARS-224ENST00000479051 RAB1BQ9H0U4 201 aa17.62■□□□□ 0.41
VARS-224ENST00000479051 MED20Q9H944 212 aa17.62■□□□□ 0.41
VARS-224ENST00000479051 TBCCD1Q9NVR7 557 aa17.62■□□□□ 0.41
VARS-224ENST00000479051 FZR1Q9UM11 496 aa17.62■□□□□ 0.41
VARS-224ENST00000479051 GRIP1Q9Y3R0 1128 aa17.62■□□□□ 0.41
VARS-224ENST00000479051 H3BSA7 217 aa17.61■□□□□ 0.41
VARS-224ENST00000479051 M0R233 179 aa17.61■□□□□ 0.41
VARS-224ENST00000479051 PRODHO43272 600 aa17.61■□□□□ 0.41
VARS-224ENST00000479051 SPARCP09486 303 aa17.61■□□□□ 0.41
VARS-224ENST00000479051 ZNF250P15622 560 aa17.61■□□□□ 0.41
VARS-224ENST00000479051 TUBG1P23258 451 aa17.61■□□□□ 0.41
VARS-224ENST00000479051 GSTT1P30711 240 aa17.61■□□□□ 0.41
VARS-224ENST00000479051 WNT5AP41221 380 aa17.61■□□□□ 0.41
VARS-224ENST00000479051 RGS6P49758 472 aa17.61■□□□□ 0.41
VARS-224ENST00000479051 EFNA4P52798 201 aa17.61■□□□□ 0.41
VARS-224ENST00000479051 KLHL12Q53G59 568 aa17.61■□□□□ 0.41
VARS-224ENST00000479051 TMEM154Q6P9G4 183 aa17.61■□□□□ 0.41
VARS-224ENST00000479051 CFAP77Q6ZQR2 320 aa17.61■□□□□ 0.41
VARS-224ENST00000479051 CXXC5Q7LFL8 322 aaKnown RBP17.61■□□□□ 0.41
VARS-224ENST00000479051 KRTAP1-3Q8IUG1 177 aa17.61■□□□□ 0.41
VARS-224ENST00000479051 CPOQ8IVL8 374 aa17.61■□□□□ 0.41
VARS-224ENST00000479051 ZNF101Q8IZC7 436 aa17.61■□□□□ 0.41
VARS-224ENST00000479051 ZNF511Q8NB15 262 aa17.61■□□□□ 0.41
VARS-224ENST00000479051 ZNRF4Q8WWF5 429 aa17.61■□□□□ 0.41
VARS-224ENST00000479051 PTP4A1Q93096 173 aa17.61■□□□□ 0.41
VARS-224ENST00000479051 Q96MF0 132 aa17.61■□□□□ 0.41
VARS-224ENST00000479051 INTS14Q96SY0 518 aa17.61■□□□□ 0.41
VARS-224ENST00000479051 ATF6BQ99941 703 aa17.61■□□□□ 0.41
VARS-224ENST00000479051 MS4A5Q9H3V2 200 aa17.61■□□□□ 0.41
VARS-224ENST00000479051 TUBG2Q9NRH3 451 aa17.61■□□□□ 0.41
VARS-224ENST00000479051 SLCO1C1Q9NYB5 712 aa17.61■□□□□ 0.41
VARS-224ENST00000479051 TMEM129A0AVI4 362 aa17.6■□□□□ 0.41
VARS-224ENST00000479051 ZAR1LA6NP61 321 aa17.6■□□□□ 0.41
VARS-224ENST00000479051 ZNF593O00488 134 aaPredicted RBP17.6■□□□□ 0.41
VARS-224ENST00000479051 MT-ND5P03915 603 aa17.6■□□□□ 0.41
VARS-224ENST00000479051 ERVS71-1P61550 626 aa17.6■□□□□ 0.41
VARS-224ENST00000479051 RPS7P62081 194 aaKnown RBP17.6■□□□□ 0.41
VARS-224ENST00000479051 PPP1CBP62140 327 aa17.6■□□□□ 0.41
VARS-224ENST00000479051 NKPD1Q17RQ9 610 aa17.6■□□□□ 0.41
VARS-224ENST00000479051 CLEC12BQ2HXU8 276 aa17.6■□□□□ 0.41
VARS-224ENST00000479051 TEX30Q5JUR7 227 aa17.6■□□□□ 0.41
VARS-224ENST00000479051 SLC35D3Q5M8T2 416 aa17.6■□□□□ 0.41
VARS-224ENST00000479051 SLX4IPQ5VYV7 408 aa17.6■□□□□ 0.41
VARS-224ENST00000479051 RFPL4BQ6ZWI9 263 aa17.6■□□□□ 0.41
VARS-224ENST00000479051 SNX33Q8WV41 574 aa17.6■□□□□ 0.41
VARS-224ENST00000479051 C9orf16Q9BUW7 83 aa17.6■□□□□ 0.41
VARS-224ENST00000479051 HCAR1Q9BXC0 346 aa17.6■□□□□ 0.41
VARS-224ENST00000479051 RIBC2Q9H4K1 309 aa17.6■□□□□ 0.41
VARS-224ENST00000479051 WDR76Q9H967 626 aa17.6■□□□□ 0.41
VARS-224ENST00000479051 HINT3Q9NQE9 182 aaKnown RBP17.6■□□□□ 0.41
VARS-224ENST00000479051 TMEFF2Q9UIK5 374 aaPredicted RBP17.6■□□□□ 0.41
VARS-224ENST00000479051 J3QW42 95 aa17.59■□□□□ 0.41
VARS-224ENST00000479051 SSX4O60224 188 aa17.59■□□□□ 0.41
VARS-224ENST00000479051 NDUFS7O75251 213 aa17.59■□□□□ 0.41
VARS-224ENST00000479051 BAG2O95816 211 aa17.59■□□□□ 0.41
VARS-224ENST00000479051 RAD23AP54725 363 aa17.59■□□□□ 0.41
VARS-224ENST00000479051 MSMPQ1L6U9 139 aa17.59■□□□□ 0.41
VARS-224ENST00000479051 LINC01590Q5TEZ4 76 aa17.59■□□□□ 0.41
VARS-224ENST00000479051 LYPD4Q6UWN0 246 aa17.59■□□□□ 0.41
VARS-224ENST00000479051 SHFQ7M4L6 423 aa17.59■□□□□ 0.41
VARS-224ENST00000479051 DCXRQ7Z4W1 244 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms