RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 DYNC1I1O14576 645 aa14.29□□□□□ -0.12
VIM-204ENST00000478746 CD247P20963 164 aa14.29□□□□□ -0.12
VIM-204ENST00000478746 PCBP3P57721 371 aaKnown RBP14.29□□□□□ -0.12
VIM-204ENST00000478746 STX1BP61266 288 aa14.29□□□□□ -0.12
VIM-204ENST00000478746 GUCY1A3Q02108 690 aa14.29□□□□□ -0.12
VIM-204ENST00000478746 C2orf68Q2NKX9 166 aa14.29□□□□□ -0.12
VIM-204ENST00000478746 ZNF404Q494X3 552 aa14.29□□□□□ -0.12
VIM-204ENST00000478746 WDR25Q64LD2 544 aaPredicted RBP14.29□□□□□ -0.12
VIM-204ENST00000478746 SYT9Q86SS6 491 aa14.29□□□□□ -0.12
VIM-204ENST00000478746 SLC30A8Q8IWU4 369 aa14.29□□□□□ -0.12
VIM-204ENST00000478746 OR5AS1Q8N127 324 aa14.29□□□□□ -0.12
VIM-204ENST00000478746 GATAD2BQ8WXI9 593 aa14.29□□□□□ -0.12
VIM-204ENST00000478746 MEGF10Q96KG7 1140 aa14.29□□□□□ -0.12
VIM-204ENST00000478746 PRSS27Q9BQR3 290 aa14.29□□□□□ -0.12
VIM-204ENST00000478746 CDADC1Q9BWV3 514 aa14.29□□□□□ -0.12
VIM-204ENST00000478746 TXNIPQ9H3M7 391 aa14.29□□□□□ -0.12
VIM-204ENST00000478746 C5orf63A6NC05 138 aa14.28□□□□□ -0.12
VIM-204ENST00000478746 G3V4G9 280 aa14.28□□□□□ -0.12
VIM-204ENST00000478746 P2RY10O00398 339 aa14.28□□□□□ -0.12
VIM-204ENST00000478746 PIN1P1O15428 100 aa14.28□□□□□ -0.12
VIM-204ENST00000478746 ENSAO43768 121 aaKnown RBP14.28□□□□□ -0.12
VIM-204ENST00000478746 FSTL3O95633 263 aa14.28□□□□□ -0.12
VIM-204ENST00000478746 CSF1P09603 554 aa14.28□□□□□ -0.12
VIM-204ENST00000478746 COX5BP10606 129 aa14.28□□□□□ -0.12
VIM-204ENST00000478746 SRP9P49458 86 aaKnown RBP14.28□□□□□ -0.12
VIM-204ENST00000478746 ENDOGQ14249 297 aaKnown RBP14.28□□□□□ -0.12
VIM-204ENST00000478746 BEAN1Q3B7T3 259 aa14.28□□□□□ -0.12
VIM-204ENST00000478746 BLOC1S3Q6QNY0 202 aa14.28□□□□□ -0.12
VIM-204ENST00000478746 Q6ZPA2 131 aa14.28□□□□□ -0.12
VIM-204ENST00000478746 FUNDC1Q8IVP5 155 aa14.28□□□□□ -0.12
VIM-204ENST00000478746 C1orf87Q8N0U7 546 aa14.28□□□□□ -0.12
VIM-204ENST00000478746 C11orf65Q8NCR3 313 aa14.28□□□□□ -0.12
VIM-204ENST00000478746 OR13G1Q8NGZ3 307 aa14.28□□□□□ -0.12
VIM-204ENST00000478746 PFN4Q8NHR9 129 aa14.28□□□□□ -0.12
VIM-204ENST00000478746 FNDC8Q8TC99 324 aa14.28□□□□□ -0.12
VIM-204ENST00000478746 C10orf82Q8WW14 230 aa14.28□□□□□ -0.12
VIM-204ENST00000478746 SPDL1Q96EA4 605 aa14.28□□□□□ -0.12
VIM-204ENST00000478746 SGTBQ96EQ0 304 aa14.28□□□□□ -0.12
VIM-204ENST00000478746 COG8Q96MW5 612 aa14.28□□□□□ -0.12
VIM-204ENST00000478746 ALG12Q9BV10 488 aa14.28□□□□□ -0.12
VIM-204ENST00000478746 TMBIM4Q9HC24 238 aa14.28□□□□□ -0.12
VIM-204ENST00000478746 ACOXLQ9NUZ1 547 aa14.28□□□□□ -0.12
VIM-204ENST00000478746 TRBV5-3A0A0A0MS03 114 aa14.27□□□□□ -0.13
VIM-204ENST00000478746 CENPVL3A0A0U1RRI6 287 aa14.27□□□□□ -0.13
VIM-204ENST00000478746 A0A1W2PPL8 197 aa14.27□□□□□ -0.13
VIM-204ENST00000478746 NPIPB13A6NJU9 1138 aa14.27□□□□□ -0.13
VIM-204ENST00000478746 LRRC30A6NM36 301 aa14.27□□□□□ -0.13
VIM-204ENST00000478746 NPIPB4C9JG80 1138 aa14.27□□□□□ -0.13
VIM-204ENST00000478746 PHYHO14832 338 aa14.27□□□□□ -0.13
VIM-204ENST00000478746 TOX4O94842 621 aa14.27□□□□□ -0.13
VIM-204ENST00000478746 SFTPBP07988 381 aa14.27□□□□□ -0.13
VIM-204ENST00000478746 RAC2P15153 192 aa14.27□□□□□ -0.13
VIM-204ENST00000478746 MSR1P21757 451 aa14.27□□□□□ -0.13
VIM-204ENST00000478746 HTR5AP47898 357 aa14.27□□□□□ -0.13
VIM-204ENST00000478746 ERFP50548 548 aa14.27□□□□□ -0.13
VIM-204ENST00000478746 TOP3AQ13472 1001 aaPredicted RBP14.27□□□□□ -0.13
VIM-204ENST00000478746 FAM201AQ5SY85 155 aa14.27□□□□□ -0.13
VIM-204ENST00000478746 C1orf94Q6P1W5 598 aa14.27□□□□□ -0.13
VIM-204ENST00000478746 LYPD2Q6UXB3 125 aa14.27□□□□□ -0.13
VIM-204ENST00000478746 FOXL2NBQ6ZUU3 175 aa14.27□□□□□ -0.13
VIM-204ENST00000478746 VASH1Q7L8A9 365 aaPredicted RBP14.27□□□□□ -0.13
VIM-204ENST00000478746 MOGAT3Q86VF5 341 aa14.27□□□□□ -0.13
VIM-204ENST00000478746 CLDN22Q8N7P3 220 aa14.27□□□□□ -0.13
VIM-204ENST00000478746 ZSCAN4Q8NAM6 433 aaPredicted RBP14.27□□□□□ -0.13
VIM-204ENST00000478746 OR10AD1Q8NGE0 317 aa14.27□□□□□ -0.13
VIM-204ENST00000478746 TRIM15Q9C019 465 aa14.27□□□□□ -0.13
VIM-204ENST00000478746 PCDHAC1Q9H158 963 aa14.27□□□□□ -0.13
VIM-204ENST00000478746 ZNF446Q9NWS9 450 aa14.27□□□□□ -0.13
VIM-204ENST00000478746 CCDC167Q9P0B6 97 aa14.27□□□□□ -0.13
VIM-204ENST00000478746 IGHV3-64DA0A0J9YX35 117 aa14.26□□□□□ -0.13
VIM-204ENST00000478746 ZNF879B4DU55 563 aa14.26□□□□□ -0.13
VIM-204ENST00000478746 SASH3O75995 380 aa14.26□□□□□ -0.13
VIM-204ENST00000478746 IGHV4-59P01825 116 aa14.26□□□□□ -0.13
VIM-204ENST00000478746 PRB2P02812 416 aaPredicted RBP14.26□□□□□ -0.13
VIM-204ENST00000478746 TSPAN19P0C672 248 aa14.26□□□□□ -0.13
VIM-204ENST00000478746 CFHR2P36980 270 aa14.26□□□□□ -0.13
VIM-204ENST00000478746 IER3P46695 156 aa14.26□□□□□ -0.13
VIM-204ENST00000478746 MRPL19P49406 292 aaKnown RBP14.26□□□□□ -0.13
VIM-204ENST00000478746 RPL27P61353 136 aaKnown RBP14.26□□□□□ -0.13
VIM-204ENST00000478746 ZNF181Q2M3W8 571 aa14.26□□□□□ -0.13
VIM-204ENST00000478746 ZNF841Q6ZN19 808 aa14.26□□□□□ -0.13
VIM-204ENST00000478746 Q6ZSV7 163 aa14.26□□□□□ -0.13
VIM-204ENST00000478746 NKAIN4Q8IVV8 208 aa14.26□□□□□ -0.13
VIM-204ENST00000478746 OR8G5Q8NG78 346 aa14.26□□□□□ -0.13
VIM-204ENST00000478746 SLC26A7Q8TE54 656 aa14.26□□□□□ -0.13
VIM-204ENST00000478746 LIPHQ8WWY8 451 aa14.26□□□□□ -0.13
VIM-204ENST00000478746 WACQ9BTA9 647 aa14.26□□□□□ -0.13
VIM-204ENST00000478746 C20orf141Q9NUB4 165 aa14.26□□□□□ -0.13
VIM-204ENST00000478746 USH1CQ9Y6N9 552 aa14.26□□□□□ -0.13
VIM-204ENST00000478746 C22orf46C9J442 243 aa14.25□□□□□ -0.13
VIM-204ENST00000478746 H0YL77 283 aa14.25□□□□□ -0.13
VIM-204ENST00000478746 PIP5K1CO60331 668 aa14.25□□□□□ -0.13
VIM-204ENST00000478746 DOK2O60496 412 aa14.25□□□□□ -0.13
VIM-204ENST00000478746 IGF2P01344 180 aa14.25□□□□□ -0.13
VIM-204ENST00000478746 SCG5P05408 212 aa14.25□□□□□ -0.13
VIM-204ENST00000478746 LIPFP07098 398 aa14.25□□□□□ -0.13
VIM-204ENST00000478746 RBM34P42696 430 aaKnown RBP14.25□□□□□ -0.13
VIM-204ENST00000478746 FAM189A2Q15884 450 aa14.25□□□□□ -0.13
VIM-204ENST00000478746 CYP51A1Q16850 503 aa14.25□□□□□ -0.13
VIM-204ENST00000478746 ALG10Q5BKT4 473 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms