RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 LPCAT4Q643R3 524 aa23.12■■□□□ 1.29
CCM2-211ENST00000478582 LRRC75A-AS1Q8N1F1 130 aa23.12■■□□□ 1.29
CCM2-211ENST00000478582 PAQR4Q8N4S7 273 aaPredicted RBP23.12■■□□□ 1.29
CCM2-211ENST00000478582 GDF2Q9UK05 429 aaPredicted RBP23.12■■□□□ 1.29
CCM2-211ENST00000478582 ZNF593O00488 134 aaPredicted RBP23.11■■□□□ 1.29
CCM2-211ENST00000478582 ICMTO60725 284 aa23.11■■□□□ 1.29
CCM2-211ENST00000478582 TTKP33981 857 aa23.11■■□□□ 1.29
CCM2-211ENST00000478582 FABP6P51161 128 aa23.11■■□□□ 1.29
CCM2-211ENST00000478582 CDC42P60953 191 aa23.11■■□□□ 1.29
CCM2-211ENST00000478582 KLHL12Q53G59 568 aa23.11■■□□□ 1.29
CCM2-211ENST00000478582 ELFN2Q5R3F8 820 aa23.11■■□□□ 1.29
CCM2-211ENST00000478582 OGFRL1Q5TC84 451 aaPredicted RBP23.11■■□□□ 1.29
CCM2-211ENST00000478582 AADACL4Q5VUY2 407 aa23.11■■□□□ 1.29
CCM2-211ENST00000478582 NXNL2Q5VZ03 156 aa23.11■■□□□ 1.29
CCM2-211ENST00000478582 SHEQ5VZ18 495 aa23.11■■□□□ 1.29
CCM2-211ENST00000478582 CORO6Q6QEF8 472 aa23.11■■□□□ 1.29
CCM2-211ENST00000478582 ZNF771Q7L3S4 317 aaPredicted RBP23.11■■□□□ 1.29
CCM2-211ENST00000478582 DTX2Q86UW9 622 aa23.11■■□□□ 1.29
CCM2-211ENST00000478582 LINC00346Q8IVM7 164 aa23.11■■□□□ 1.29
CCM2-211ENST00000478582 TIGD4Q8IY51 512 aa23.11■■□□□ 1.29
CCM2-211ENST00000478582 OR8J1Q8NGP2 316 aa23.11■■□□□ 1.29
CCM2-211ENST00000478582 OR1F12Q8NHA8 337 aa23.11■■□□□ 1.29
CCM2-211ENST00000478582 TRUB1Q8WWH5 349 aaKnown RBP23.11■■□□□ 1.29
CCM2-211ENST00000478582 TEAD3Q99594 435 aa23.11■■□□□ 1.29
CCM2-211ENST00000478582 HDHD2Q9H0R4 259 aa23.11■■□□□ 1.29
CCM2-211ENST00000478582 C5orf49A4QMS7 147 aa23.1■■□□□ 1.29
CCM2-211ENST00000478582 SOD3P08294 240 aa23.1■■□□□ 1.29
CCM2-211ENST00000478582 PEX2P28328 305 aa23.1■■□□□ 1.29
CCM2-211ENST00000478582 GLRXP35754 106 aa23.1■■□□□ 1.29
CCM2-211ENST00000478582 SNTB2Q13425 540 aaKnown RBP23.1■■□□□ 1.29
CCM2-211ENST00000478582 APOFQ13790 326 aa23.1■■□□□ 1.29
CCM2-211ENST00000478582 KRT80Q6KB66 452 aa23.1■■□□□ 1.29
CCM2-211ENST00000478582 CFAP77Q6ZQR2 320 aa23.1■■□□□ 1.29
CCM2-211ENST00000478582 WFDC11Q8NEX6 87 aa23.1■■□□□ 1.29
CCM2-211ENST00000478582 ZMYND19Q96E35 227 aaPredicted RBP23.1■■□□□ 1.29
CCM2-211ENST00000478582 IL4I1Q96RQ9 567 aa23.1■■□□□ 1.29
CCM2-211ENST00000478582 INTS14Q96SY0 518 aa23.1■■□□□ 1.29
CCM2-211ENST00000478582 PITX2Q99697 317 aa23.1■■□□□ 1.29
CCM2-211ENST00000478582 COQ7Q99807 217 aa23.1■■□□□ 1.29
CCM2-211ENST00000478582 SMPD3Q9NY59 655 aaPredicted RBP23.1■■□□□ 1.29
CCM2-211ENST00000478582 NKX1-2Q9UD57 310 aaPredicted RBP23.1■■□□□ 1.29
CCM2-211ENST00000478582 M0R129 80 aa23.09■■□□□ 1.29
CCM2-211ENST00000478582 DLGAP1O14490 977 aa23.09■■□□□ 1.29
CCM2-211ENST00000478582 PSKH1P11801 424 aa23.09■■□□□ 1.29
CCM2-211ENST00000478582 THBS4P35443 961 aa23.09■■□□□ 1.29
CCM2-211ENST00000478582 HTR5AP47898 357 aa23.09■■□□□ 1.29
CCM2-211ENST00000478582 SLC34A1Q06495 639 aa23.09■■□□□ 1.29
CCM2-211ENST00000478582 LRRC36Q1X8D7 754 aa23.09■■□□□ 1.29
CCM2-211ENST00000478582 AGAP6Q5VW22 663 aa23.09■■□□□ 1.29
CCM2-211ENST00000478582 KRTAP1-3Q8IUG1 177 aa23.09■■□□□ 1.29
CCM2-211ENST00000478582 FBXL14Q8N1E6 418 aa23.09■■□□□ 1.29
CCM2-211ENST00000478582 MAP6Q96JE9 813 aa23.09■■□□□ 1.29
CCM2-211ENST00000478582 RNPEPL1Q9HAU8 725 aa23.09■■□□□ 1.29
CCM2-211ENST00000478582 PNRC2Q9NPJ4 139 aaKnown RBP23.09■■□□□ 1.29
CCM2-211ENST00000478582 H2AFY2Q9P0M6 372 aaPredicted RBP23.09■■□□□ 1.29
CCM2-211ENST00000478582 MAP1AP78559 2803 aaPredicted RBP23.09■■□□□ 1.29
CCM2-211ENST00000478582 ARID1AO14497 2285 aa23.08■■□□□ 1.29
CCM2-211ENST00000478582 CCDC182A6NF36 153 aa23.08■■□□□ 1.29
CCM2-211ENST00000478582 VSTM5A8MXK1 200 aa23.08■■□□□ 1.29
CCM2-211ENST00000478582 H0YHG0 523 aa23.08■■□□□ 1.29
CCM2-211ENST00000478582 CD8AP01732 235 aa23.08■■□□□ 1.29
CCM2-211ENST00000478582 RAD52P43351 418 aa23.08■■□□□ 1.29
CCM2-211ENST00000478582 UCP2P55851 309 aa23.08■■□□□ 1.29
CCM2-211ENST00000478582 RPS7P62081 194 aaKnown RBP23.08■■□□□ 1.29
CCM2-211ENST00000478582 RPS23P62266 143 aaKnown RBP23.08■■□□□ 1.29
CCM2-211ENST00000478582 ECH1Q13011 328 aa23.08■■□□□ 1.29
CCM2-211ENST00000478582 ADIPOQQ15848 244 aa23.08■■□□□ 1.29
CCM2-211ENST00000478582 LCN1P1Q5VSP4 162 aa23.08■■□□□ 1.29
CCM2-211ENST00000478582 MEPCEQ7L2J0 689 aaKnown RBP23.08■■□□□ 1.29
CCM2-211ENST00000478582 SHFQ7M4L6 423 aa23.08■■□□□ 1.29
CCM2-211ENST00000478582 ERI1Q8IV48 349 aaKnown RBP23.08■■□□□ 1.29
CCM2-211ENST00000478582 MUC15Q8N387 334 aa23.08■■□□□ 1.29
CCM2-211ENST00000478582 GALNT4Q8N4A0 578 aa23.08■■□□□ 1.29
CCM2-211ENST00000478582 FAM81AQ8TBF8 368 aa23.08■■□□□ 1.29
CCM2-211ENST00000478582 TMEM171Q8WVE6 324 aa23.08■■□□□ 1.29
CCM2-211ENST00000478582 DCLRE1CQ96SD1 692 aaKnown RBP23.08■■□□□ 1.29
CCM2-211ENST00000478582 TRAF4Q9BUZ4 470 aaPredicted RBP23.08■■□□□ 1.29
CCM2-211ENST00000478582 BCL2L14Q9BZR8 327 aa23.08■■□□□ 1.29
CCM2-211ENST00000478582 CBLN4Q9NTU7 201 aa23.08■■□□□ 1.29
CCM2-211ENST00000478582 FAM118AQ9NWS6 357 aa23.08■■□□□ 1.29
CCM2-211ENST00000478582 EIF3KQ9UBQ5 218 aaKnown RBP23.08■■□□□ 1.29
CCM2-211ENST00000478582 LAMP3Q9UQV4 416 aa23.08■■□□□ 1.29
CCM2-211ENST00000478582 SLC16A6O15403 523 aa23.07■■□□□ 1.28
CCM2-211ENST00000478582 SPARCP09486 303 aa23.07■■□□□ 1.28
CCM2-211ENST00000478582 CCNOP22674 350 aa23.07■■□□□ 1.28
CCM2-211ENST00000478582 WNT5AP41221 380 aa23.07■■□□□ 1.28
CCM2-211ENST00000478582 RPS27P42677 84 aaKnown RBP23.07■■□□□ 1.28
CCM2-211ENST00000478582 KRTAP27-1Q3LI81 207 aa23.07■■□□□ 1.28
CCM2-211ENST00000478582 SLC25A30Q5SVS4 291 aa23.07■■□□□ 1.28
CCM2-211ENST00000478582 BCDIN3DQ7Z5W3 292 aaKnown RBP23.07■■□□□ 1.28
CCM2-211ENST00000478582 GID4Q8IVV7 300 aa23.07■■□□□ 1.28
CCM2-211ENST00000478582 C1orf174Q8IYL3 243 aa23.07■■□□□ 1.28
CCM2-211ENST00000478582 IPCEF1Q8WWN9 437 aaPredicted RBP23.07■■□□□ 1.28
CCM2-211ENST00000478582 IMPAD1Q9NX62 359 aa23.07■■□□□ 1.28
CCM2-211ENST00000478582 GMPPBQ9Y5P6 360 aa23.07■■□□□ 1.28
CCM2-211ENST00000478582 LOC100130705A0A1B0GUX0 176 aa23.06■■□□□ 1.28
CCM2-211ENST00000478582 SLC22A31A6NKX4 558 aa23.06■■□□□ 1.28
CCM2-211ENST00000478582 OR4A8P0C604 315 aa23.06■■□□□ 1.28
CCM2-211ENST00000478582 SERPINF1P36955 418 aa23.06■■□□□ 1.28
CCM2-211ENST00000478582 SNRPGP62308 76 aaKnown RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms