RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 PTGES2Q9H7Z7 377 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 SCP2D1Q9UJQ7 156 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 ASXL3Q9C0F0 2248 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 IGKV1D-43A0A0B4J1Z2 117 aa10.88□□□□□ -0.67
PTPRF-212ENST00000477970 TMEM272A0A1B0GTI8 110 aa10.88□□□□□ -0.67
PTPRF-212ENST00000477970 TRAF3IP2O43734 574 aaPredicted RBP10.88□□□□□ -0.67
PTPRF-212ENST00000477970 HTR2CP28335 458 aa10.88□□□□□ -0.67
PTPRF-212ENST00000477970 BIDP55957 195 aa10.88□□□□□ -0.67
PTPRF-212ENST00000477970 BTBD16Q32M84 506 aa10.88□□□□□ -0.67
PTPRF-212ENST00000477970 SLC25A47Q6Q0C1 308 aa10.88□□□□□ -0.67
PTPRF-212ENST00000477970 OPN5Q6U736 354 aa10.88□□□□□ -0.67
PTPRF-212ENST00000477970 AGBL5Q8NDL9 886 aa10.88□□□□□ -0.67
PTPRF-212ENST00000477970 OR51D1Q8NGF3 324 aa10.88□□□□□ -0.67
PTPRF-212ENST00000477970 C11orf40Q8WZ69 217 aa10.88□□□□□ -0.67
PTPRF-212ENST00000477970 NUDT16L1Q9BRJ7 211 aaKnown RBP10.88□□□□□ -0.67
PTPRF-212ENST00000477970 SLCO5A1Q9H2Y9 848 aa10.88□□□□□ -0.67
PTPRF-212ENST00000477970 EMC9Q9Y3B6 208 aa10.88□□□□□ -0.67
PTPRF-212ENST00000477970 LOC107986453A0A1B0GWG9 222 aa10.88□□□□□ -0.67
PTPRF-212ENST00000477970 AQP7P3A6NL99 342 aa10.88□□□□□ -0.67
PTPRF-212ENST00000477970 PMS2P2O95744 297 aa10.88□□□□□ -0.67
PTPRF-212ENST00000477970 IGHG1P01857 330 aa10.88□□□□□ -0.67
PTPRF-212ENST00000477970 TMIGD3P0DMS9 266 aaPredicted RBP10.88□□□□□ -0.67
PTPRF-212ENST00000477970 ZNF133P52736 654 aaPredicted RBP10.88□□□□□ -0.67
PTPRF-212ENST00000477970 LPAL2Q16609 132 aa10.88□□□□□ -0.67
PTPRF-212ENST00000477970 PHF19Q5T6S3 580 aa10.88□□□□□ -0.67
PTPRF-212ENST00000477970 ZNF529Q6P280 563 aa10.88□□□□□ -0.67
PTPRF-212ENST00000477970 ELMOD2Q8IZ81 293 aa10.88□□□□□ -0.67
PTPRF-212ENST00000477970 KDM8Q8N371 416 aa10.88□□□□□ -0.67
PTPRF-212ENST00000477970 GTPBP8Q8N3Z3 284 aaPredicted RBP10.88□□□□□ -0.67
PTPRF-212ENST00000477970 PIGKQ92643 395 aa10.88□□□□□ -0.67
PTPRF-212ENST00000477970 FOXN4Q96NZ1 517 aa10.88□□□□□ -0.67
PTPRF-212ENST00000477970 ANGPTL4Q9BY76 406 aa10.88□□□□□ -0.67
PTPRF-212ENST00000477970 C1orf198Q9H425 327 aa10.88□□□□□ -0.67
PTPRF-212ENST00000477970 MED29Q9NX70 200 aa10.88□□□□□ -0.67
PTPRF-212ENST00000477970 DLL3Q9NYJ7 618 aa10.88□□□□□ -0.67
PTPRF-212ENST00000477970 TAS2R4Q9NYW5 299 aa10.88□□□□□ -0.67
PTPRF-212ENST00000477970 UMODP07911 640 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 CD63P08962 238 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 H2BFMP0C1H6 154 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 ZNF883P0CG24 379 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 COX6A1P12074 109 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 NR2C1P13056 603 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 PLA2G7Q13093 441 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 EIF3IQ13347 325 aaKnown RBP10.87□□□□□ -0.67
PTPRF-212ENST00000477970 ADGRE4PQ86SQ3 457 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 BIVMQ86UB2 503 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 OR10H5Q8NGA6 315 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 OR13C3Q8NGS6 347 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 GPX8Q8TED1 209 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 NOX3Q9HBY0 568 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 FBLN5Q9UBX5 448 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 TMEM269A0A1B0GVZ9 245 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 IGHEP01854 428 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 KLK3P07288 261 aaPredicted RBP10.87□□□□□ -0.67
PTPRF-212ENST00000477970 GP1BAP07359 652 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 EFNB2P52799 333 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 SLC35A1P78382 337 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 ZNF626Q68DY1 528 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 MDGA2Q7Z553 956 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 PHF21AQ96BD5 680 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 SLAMF6Q96DU3 332 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 DLL4Q9NR61 685 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 ALDOBP05062 364 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 HSD11B1P28845 292 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 DNASE1L1P49184 302 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 ACTBP60709 375 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 ZP1P60852 638 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 ACTG1P63261 375 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 DHODHQ02127 395 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 CAMK2DQ13557 499 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 POU4F3Q15319 338 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 RBMS2Q15434 407 aaKnown RBP10.87□□□□□ -0.67
PTPRF-212ENST00000477970 ODF4Q2M2E3 257 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 GCDHQ92947 438 aaPredicted RBP10.87□□□□□ -0.67
PTPRF-212ENST00000477970 UQCC2Q9BRT2 126 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 ZNF436Q9C0F3 470 aaPredicted RBP10.87□□□□□ -0.67
PTPRF-212ENST00000477970 GPN1Q9HCN4 374 aaPredicted RBP10.87□□□□□ -0.67
PTPRF-212ENST00000477970 ZNF222Q9UK12 451 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 FBXL2Q9UKC9 423 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 KNL1Q8NG31 2342 aa10.87□□□□□ -0.67
PTPRF-212ENST00000477970 PI4KAP42356 2102 aa10.86□□□□□ -0.67
PTPRF-212ENST00000477970 H3BML4 177 aa10.86□□□□□ -0.67
PTPRF-212ENST00000477970 KLF7O75840 302 aaPredicted RBP10.86□□□□□ -0.67
PTPRF-212ENST00000477970 ZNF17P17021 662 aa10.86□□□□□ -0.67
PTPRF-212ENST00000477970 CXCL3P19876 107 aa10.86□□□□□ -0.67
PTPRF-212ENST00000477970 LINC00303Q3SY05 128 aa10.86□□□□□ -0.67
PTPRF-212ENST00000477970 SFRP4Q6FHJ7 346 aaPredicted RBP10.86□□□□□ -0.67
PTPRF-212ENST00000477970 SLC25A25Q6KCM7 469 aa10.86□□□□□ -0.67
PTPRF-212ENST00000477970 MTFR2Q6P444 385 aa10.86□□□□□ -0.67
PTPRF-212ENST00000477970 OR4K17Q8NGC6 315 aa10.86□□□□□ -0.67
PTPRF-212ENST00000477970 OR6N1Q8NGY5 312 aa10.86□□□□□ -0.67
PTPRF-212ENST00000477970 ASB13Q8WXK3 278 aa10.86□□□□□ -0.67
PTPRF-212ENST00000477970 PMEPA1Q969W9 287 aa10.86□□□□□ -0.67
PTPRF-212ENST00000477970 PPP1R14AQ96A00 147 aa10.86□□□□□ -0.67
PTPRF-212ENST00000477970 SORCS2Q96PQ0 1159 aa10.86□□□□□ -0.67
PTPRF-212ENST00000477970 FSCN3Q9NQT6 498 aa10.86□□□□□ -0.67
PTPRF-212ENST00000477970 B4E171 279 aa10.86□□□□□ -0.67
PTPRF-212ENST00000477970 C9J4A7 227 aa10.86□□□□□ -0.67
PTPRF-212ENST00000477970 TM4SF5O14894 197 aa10.86□□□□□ -0.67
PTPRF-212ENST00000477970 HPXP02790 462 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms