RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 ASIC5Q9NY37 505 aa5.96□□□□□ -1.46
SPTLC1-205ENST00000477888 RPS6KB2Q9UBS0 482 aa5.96□□□□□ -1.46
SPTLC1-205ENST00000477888 TMCC3Q9ULS5 477 aa5.96□□□□□ -1.46
SPTLC1-205ENST00000477888 UGT2A1Q9Y4X1 527 aa5.96□□□□□ -1.46
SPTLC1-205ENST00000477888 CCDC154A6NI56 674 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 HMGB1P1B2RPK0 211 aaPredicted RBP5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 CHST1O43916 411 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 GLRA3O75311 464 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 ECDO95905 644 aaPredicted RBP5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 PAHP00439 452 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 MT-ATP6P00846 226 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 LHBP01229 141 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 IGHG1P01857 330 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 EEF1B2P24534 225 aaKnown RBP5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 SAA4P35542 130 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 GATA4P43694 442 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 ZNF84P51523 738 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 CRISP3P54108 245 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 ERVK-25P63136 954 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 HOXA4Q00056 320 aaPredicted RBP5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 PRB3Q04118 309 aaPredicted RBP5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 EMX2Q04743 252 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 MELKQ14680 651 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 TAF11Q15544 211 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 LY6EQ16553 131 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 CCDC153Q494R4 210 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 C10orf128Q5T292 105 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 FAM27BQ5VT28 67 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 FAM91A1Q658Y4 838 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 ULK3Q6PHR2 472 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 ARL9Q6T311 187 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 C10orf107Q8IVU9 208 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 PNKDQ8N490 385 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 NPEPL1Q8NDH3 523 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 LY6G5BQ8NDX9 201 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 OR8G5Q8NG78 346 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 OR13G1Q8NGZ3 307 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 SLC7A13Q8TCU3 470 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 MZB1Q8WU39 189 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 C17orf50Q8WW18 174 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 NSMAFQ92636 917 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 PTP4A1Q93096 173 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 NMD3Q96D46 503 aaKnown RBP5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 RBMXL1Q96E39 390 aaKnown RBP5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 AJUBAQ96IF1 538 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 CCDC115Q96NT0 180 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 ASCL2Q99929 193 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 CHID1Q9BWS9 393 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 FAM234AQ9H0X4 552 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 RAB18Q9NP72 206 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 PALMDQ9NP74 551 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 CALML5Q9NZT1 146 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 BTNL2Q9UIR0 455 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 STARD10Q9Y365 291 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 IFT52Q9Y366 437 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 TIMM10BQ9Y5J6 103 aa5.95□□□□□ -1.46
SPTLC1-205ENST00000477888 A0A087WUV0 522 aaPredicted RBP5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 TRBV23-1A0A0A0MS06 115 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 IGKV1D-43A0A0B4J1Z2 117 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 A0A0G2JPF8 293 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 A0A1B0GWJ7 208 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 A0A1W2PPM1 405 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 A0A1W2PRD5 423 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 A0A1W2PRF3 423 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 A0A1W2PRM7 423 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 A0A1W2PRX2 142 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 MEIOCA2RUB1 952 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 CENPBD1B2RD01 187 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 HNRNPCL2B2RXH8 293 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 HNRNPCL3B7ZW38 293 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 F5H5P2 479 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 MLNRO43193 412 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 ADAM20O43506 726 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 HNRNPCL1O60812 293 aaKnown RBP5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 OR6A2O95222 327 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 ABHD16AO95870 558 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 SCGB1D2O95969 90 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 CHRM2P08172 466 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 GSTP1P09211 210 aaKnown RBP5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 HNRNPCL4P0DMR1 293 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 PF4V1P10720 104 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 RAC2P15153 192 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 CDKN2CP42773 168 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 DLX1P56177 255 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 CLRN1P58418 232 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 GUCY1A3Q02108 690 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 MAB21L1Q13394 359 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 TCTEX1D4Q5JR98 221 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 SPANXN4Q5MJ08 99 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 CLEC12AQ5QGZ9 265 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 SFRP4Q6FHJ7 346 aaPredicted RBP5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 ADAMTSL5Q6ZMM2 481 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 COMTD1Q86VU5 262 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 OR5AS1Q8N127 324 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 C10orf53Q8N6V4 93 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 Q8N7P7 452 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 Q8NFD4 153 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 PIFOQ8TCI5 191 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 TESCQ96BS2 214 aa5.94□□□□□ -1.46
SPTLC1-205ENST00000477888 TMEM43Q9BTV4 400 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms