RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 ATG16L2Q8NAA4 619 aa16.81■□□□□ 0.28
PDLIM1-202ENST00000477757 OR10AD1Q8NGE0 317 aa16.81■□□□□ 0.28
PDLIM1-202ENST00000477757 OR4D11Q8NGI4 311 aa16.81■□□□□ 0.28
PDLIM1-202ENST00000477757 OR52B2Q96RD2 323 aa16.81■□□□□ 0.28
PDLIM1-202ENST00000477757 TBX15Q96SF7 602 aa16.81■□□□□ 0.28
PDLIM1-202ENST00000477757 PRSS27Q9BQR3 290 aa16.81■□□□□ 0.28
PDLIM1-202ENST00000477757 ALG12Q9BV10 488 aa16.81■□□□□ 0.28
PDLIM1-202ENST00000477757 CORO2BQ9UQ03 480 aa16.81■□□□□ 0.28
PDLIM1-202ENST00000477757 LRRC30A6NM36 301 aa16.8■□□□□ 0.28
PDLIM1-202ENST00000477757 OR7A10O76100 309 aa16.8■□□□□ 0.28
PDLIM1-202ENST00000477757 OPN1MWP04001 364 aa16.8■□□□□ 0.28
PDLIM1-202ENST00000477757 TSPAN19P0C672 248 aa16.8■□□□□ 0.28
PDLIM1-202ENST00000477757 OPN1MW2P0DN77 364 aa16.8■□□□□ 0.28
PDLIM1-202ENST00000477757 OPN1MW3P0DN78 364 aa16.8■□□□□ 0.28
PDLIM1-202ENST00000477757 MMP9P14780 707 aa16.8■□□□□ 0.28
PDLIM1-202ENST00000477757 GPX2P18283 190 aa16.8■□□□□ 0.28
PDLIM1-202ENST00000477757 IER3P46695 156 aa16.8■□□□□ 0.28
PDLIM1-202ENST00000477757 FAM189A2Q15884 450 aa16.8■□□□□ 0.28
PDLIM1-202ENST00000477757 RUNDC3AQ59EK9 446 aa16.8■□□□□ 0.28
PDLIM1-202ENST00000477757 ZNF841Q6ZN19 808 aa16.8■□□□□ 0.28
PDLIM1-202ENST00000477757 GDPGP1Q6ZNW5 385 aa16.8■□□□□ 0.28
PDLIM1-202ENST00000477757 DCDC5Q6ZRR9 648 aa16.8■□□□□ 0.28
PDLIM1-202ENST00000477757 MAVSQ7Z434 540 aa16.8■□□□□ 0.28
PDLIM1-202ENST00000477757 C1orf87Q8N0U7 546 aa16.8■□□□□ 0.28
PDLIM1-202ENST00000477757 MOSPD2Q8NHP6 518 aa16.8■□□□□ 0.28
PDLIM1-202ENST00000477757 COG8Q96MW5 612 aa16.8■□□□□ 0.28
PDLIM1-202ENST00000477757 TRIM15Q9C019 465 aa16.8■□□□□ 0.28
PDLIM1-202ENST00000477757 THAP1Q9NVV9 213 aa16.8■□□□□ 0.28
PDLIM1-202ENST00000477757 STARD10Q9Y365 291 aa16.8■□□□□ 0.28
PDLIM1-202ENST00000477757 TET2Q6N021 2002 aaPredicted RBP16.8■□□□□ 0.28
PDLIM1-202ENST00000477757 TENM3Q9P273 2699 aa16.8■□□□□ 0.28
PDLIM1-202ENST00000477757 C12orf71A8MTZ7 269 aa16.79■□□□□ 0.28
PDLIM1-202ENST00000477757 ZNF879B4DU55 563 aa16.79■□□□□ 0.28
PDLIM1-202ENST00000477757 PIP5K1CO60331 668 aa16.79■□□□□ 0.28
PDLIM1-202ENST00000477757 MT-ND1P03886 318 aa16.79■□□□□ 0.28
PDLIM1-202ENST00000477757 OPN1SWP03999 348 aa16.79■□□□□ 0.28
PDLIM1-202ENST00000477757 VIMP08670 466 aaKnown RBP16.79■□□□□ 0.28
PDLIM1-202ENST00000477757 FUT1P19526 365 aa16.79■□□□□ 0.28
PDLIM1-202ENST00000477757 MSR1P21757 451 aa16.79■□□□□ 0.28
PDLIM1-202ENST00000477757 HTR5AP47898 357 aa16.79■□□□□ 0.28
PDLIM1-202ENST00000477757 SRP9P49458 86 aaKnown RBP16.79■□□□□ 0.28
PDLIM1-202ENST00000477757 LYPD2Q6UXB3 125 aa16.79■□□□□ 0.28
PDLIM1-202ENST00000477757 MOGAT3Q86VF5 341 aa16.79■□□□□ 0.28
PDLIM1-202ENST00000477757 FNDC8Q8TC99 324 aa16.79■□□□□ 0.28
PDLIM1-202ENST00000477757 TXNIPQ9H3M7 391 aa16.79■□□□□ 0.28
PDLIM1-202ENST00000477757 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.79■□□□□ 0.286e-15■■■■■ 64
PDLIM1-202ENST00000477757 IGHV1-69DA0A0B4J2H0 117 aa16.78■□□□□ 0.28
PDLIM1-202ENST00000477757 RGS16O15492 202 aaPredicted RBP16.78■□□□□ 0.28
PDLIM1-202ENST00000477757 DOK2O60496 412 aa16.78■□□□□ 0.28
PDLIM1-202ENST00000477757 TOX4O94842 621 aa16.78■□□□□ 0.28
PDLIM1-202ENST00000477757 IGHV1-69P01742 117 aa16.78■□□□□ 0.28
PDLIM1-202ENST00000477757 RAC2P15153 192 aa16.78■□□□□ 0.28
PDLIM1-202ENST00000477757 PSMB10P40306 273 aa16.78■□□□□ 0.28
PDLIM1-202ENST00000477757 MRPL19P49406 292 aaKnown RBP16.78■□□□□ 0.28
PDLIM1-202ENST00000477757 KRT71Q3SY84 523 aa16.78■□□□□ 0.28
PDLIM1-202ENST00000477757 FAM201AQ5SY85 155 aa16.78■□□□□ 0.28
PDLIM1-202ENST00000477757 OR5AS1Q8N127 324 aa16.78■□□□□ 0.28
PDLIM1-202ENST00000477757 CLDN22Q8N7P3 220 aa16.78■□□□□ 0.28
PDLIM1-202ENST00000477757 PFN4Q8NHR9 129 aa16.78■□□□□ 0.28
PDLIM1-202ENST00000477757 LIPHQ8WWY8 451 aa16.78■□□□□ 0.28
PDLIM1-202ENST00000477757 WACQ9BTA9 647 aa16.78■□□□□ 0.28
PDLIM1-202ENST00000477757 A0A0U1RQK1 487 aa16.77■□□□□ 0.28
PDLIM1-202ENST00000477757 A0A1W2PPL8 197 aa16.77■□□□□ 0.28
PDLIM1-202ENST00000477757 PLXNB1O43157 2135 aa16.77■□□□□ 0.28
PDLIM1-202ENST00000477757 IGF2P01344 180 aa16.77■□□□□ 0.28
PDLIM1-202ENST00000477757 CD247P20963 164 aa16.77■□□□□ 0.28
PDLIM1-202ENST00000477757 GUCA1AP43080 201 aaPredicted RBP16.77■□□□□ 0.28
PDLIM1-202ENST00000477757 TOP3AQ13472 1001 aaPredicted RBP16.77■□□□□ 0.28
PDLIM1-202ENST00000477757 PAGE3Q5JUK9 113 aa16.77■□□□□ 0.28
PDLIM1-202ENST00000477757 DHRS7BQ6IAN0 325 aaPredicted RBP16.77■□□□□ 0.28
PDLIM1-202ENST00000477757 C11orf65Q8NCR3 313 aa16.77■□□□□ 0.28
PDLIM1-202ENST00000477757 OR8G5Q8NG78 346 aa16.77■□□□□ 0.28
PDLIM1-202ENST00000477757 OR13G1Q8NGZ3 307 aa16.77■□□□□ 0.28
PDLIM1-202ENST00000477757 MRAPQ8TCY5 172 aa16.77■□□□□ 0.28
PDLIM1-202ENST00000477757 LRTOMTQ8WZ04 291 aa16.77■□□□□ 0.28
PDLIM1-202ENST00000477757 PTP4A1Q93096 173 aa16.77■□□□□ 0.28
PDLIM1-202ENST00000477757 SGTBQ96EQ0 304 aa16.77■□□□□ 0.28
PDLIM1-202ENST00000477757 WDFY2Q96P53 400 aa16.77■□□□□ 0.28
PDLIM1-202ENST00000477757 RBP7Q96R05 134 aa16.77■□□□□ 0.28
PDLIM1-202ENST00000477757 PAIP2Q9BPZ3 127 aaKnown RBP16.77■□□□□ 0.28
PDLIM1-202ENST00000477757 C20orf141Q9NUB4 165 aa16.77■□□□□ 0.28
PDLIM1-202ENST00000477757 COL7A1Q02388 2944 aa16.76■□□□□ 0.27
PDLIM1-202ENST00000477757 EVPLLA8MZ36 301 aa16.76■□□□□ 0.27
PDLIM1-202ENST00000477757 J3QW42 95 aa16.76■□□□□ 0.27
PDLIM1-202ENST00000477757 MLNRO43193 412 aa16.76■□□□□ 0.27
PDLIM1-202ENST00000477757 TSPAN9O75954 239 aa16.76■□□□□ 0.27
PDLIM1-202ENST00000477757 LIPFP07098 398 aa16.76■□□□□ 0.27
PDLIM1-202ENST00000477757 RBM34P42696 430 aaKnown RBP16.76■□□□□ 0.27
PDLIM1-202ENST00000477757 NPY4RP50391 375 aa16.76■□□□□ 0.27
PDLIM1-202ENST00000477757 SCRN3Q0VDG4 424 aa16.76■□□□□ 0.27
PDLIM1-202ENST00000477757 BLOC1S3Q6QNY0 202 aa16.76■□□□□ 0.27
PDLIM1-202ENST00000477757 FBXW12Q6X9E4 464 aa16.76■□□□□ 0.27
PDLIM1-202ENST00000477757 VASH1Q7L8A9 365 aaPredicted RBP16.76■□□□□ 0.27
PDLIM1-202ENST00000477757 FUNDC1Q8IVP5 155 aa16.76■□□□□ 0.27
PDLIM1-202ENST00000477757 SLC30A8Q8IWU4 369 aa16.76■□□□□ 0.27
PDLIM1-202ENST00000477757 TECTBQ96PL2 329 aa16.76■□□□□ 0.27
PDLIM1-202ENST00000477757 CPPED1Q9BRF8 314 aaPredicted RBP16.76■□□□□ 0.27
PDLIM1-202ENST00000477757 DPAGT1Q9H3H5 408 aa16.76■□□□□ 0.27
PDLIM1-202ENST00000477757 POLE4Q9NR33 117 aa16.76■□□□□ 0.27
PDLIM1-202ENST00000477757 IGHV3-64DA0A0J9YX35 117 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms