RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 RFC3P40938 356 aa10.65□□□□□ -0.7
PRPF39-203ENST00000477626 MXD1Q05195 221 aa10.65□□□□□ -0.7
PRPF39-203ENST00000477626 PLA2G7Q13093 441 aa10.65□□□□□ -0.7
PRPF39-203ENST00000477626 RDH10Q8IZV5 341 aa10.65□□□□□ -0.7
PRPF39-203ENST00000477626 CPT1CQ8TCG5 803 aa10.65□□□□□ -0.7
PRPF39-203ENST00000477626 ACOT12Q8WYK0 555 aa10.65□□□□□ -0.7
PRPF39-203ENST00000477626 ROBO4Q8WZ75 1007 aa10.65□□□□□ -0.7
PRPF39-203ENST00000477626 EMC7Q9NPA0 242 aa10.65□□□□□ -0.7
PRPF39-203ENST00000477626 NUFIP1Q9UHK0 495 aaKnown RBP10.65□□□□□ -0.7
PRPF39-203ENST00000477626 AIPO00170 330 aa10.64□□□□□ -0.71
PRPF39-203ENST00000477626 SERPINI2O75830 405 aa10.64□□□□□ -0.71
PRPF39-203ENST00000477626 ADRB1P08588 477 aa10.64□□□□□ -0.71
PRPF39-203ENST00000477626 CSF3P09919 207 aa10.64□□□□□ -0.71
PRPF39-203ENST00000477626 ZNF12P17014 697 aa10.64□□□□□ -0.71
PRPF39-203ENST00000477626 HOXD11P31277 338 aaPredicted RBP10.64□□□□□ -0.71
PRPF39-203ENST00000477626 ZNF121P58317 390 aaPredicted RBP10.64□□□□□ -0.71
PRPF39-203ENST00000477626 ZNF248Q8NDW4 579 aa10.64□□□□□ -0.71
PRPF39-203ENST00000477626 C1orf147Q96MC9 270 aaPredicted RBP10.64□□□□□ -0.71
PRPF39-203ENST00000477626 JSRP1Q96MG2 331 aaPredicted RBP10.64□□□□□ -0.71
PRPF39-203ENST00000477626 GSTK1Q9Y2Q3 226 aa10.64□□□□□ -0.71
PRPF39-203ENST00000477626 ZNF407Q9C0G0 2248 aa10.64□□□□□ -0.71
PRPF39-203ENST00000477626 WIPF3A6NGB9 483 aa10.64□□□□□ -0.71
PRPF39-203ENST00000477626 ZNF891A8MT65 544 aaPredicted RBP10.64□□□□□ -0.71
PRPF39-203ENST00000477626 NOTOA8MTQ0 251 aa10.64□□□□□ -0.71
PRPF39-203ENST00000477626 EIF1AYO14602 144 aaKnown RBP10.64□□□□□ -0.71
PRPF39-203ENST00000477626 HPGDSO60760 199 aa10.64□□□□□ -0.71
PRPF39-203ENST00000477626 SOX6P35712 828 aa10.64□□□□□ -0.71
PRPF39-203ENST00000477626 PSMA6P60900 246 aaKnown RBP10.64□□□□□ -0.71
PRPF39-203ENST00000477626 PAMR1Q6UXH9 720 aa10.64□□□□□ -0.71
PRPF39-203ENST00000477626 COLCA1Q6ZS62 124 aa10.64□□□□□ -0.71
PRPF39-203ENST00000477626 HTRA1Q92743 480 aa10.64□□□□□ -0.71
PRPF39-203ENST00000477626 FOXJ3Q9UPW0 622 aa10.64□□□□□ -0.71
PRPF39-203ENST00000477626 V9GYS6 101 aa10.64□□□□□ -0.71
PRPF39-203ENST00000477626 KNTC1P50748 2209 aa10.64□□□□□ -0.71
PRPF39-203ENST00000477626 CIB4A0PJX0 185 aa10.64□□□□□ -0.71
PRPF39-203ENST00000477626 ACOD1A6NK06 481 aa10.64□□□□□ -0.71
PRPF39-203ENST00000477626 IFITM5A6NNB3 132 aa10.64□□□□□ -0.71
PRPF39-203ENST00000477626 KRT8P05787 483 aa10.64□□□□□ -0.71
PRPF39-203ENST00000477626 CST2P09228 141 aa10.64□□□□□ -0.71
PRPF39-203ENST00000477626 SPARCP09486 303 aa10.64□□□□□ -0.71
PRPF39-203ENST00000477626 SPNP16150 400 aa10.64□□□□□ -0.71
PRPF39-203ENST00000477626 SCAND1P57086 179 aa10.64□□□□□ -0.71
PRPF39-203ENST00000477626 CLRN1P58418 232 aa10.64□□□□□ -0.71
PRPF39-203ENST00000477626 FOXC1Q12948 553 aa10.64□□□□□ -0.71
PRPF39-203ENST00000477626 P2RY14Q15391 338 aa10.64□□□□□ -0.71
PRPF39-203ENST00000477626 C11orf91Q3C1V1 193 aa10.64□□□□□ -0.71
PRPF39-203ENST00000477626 TMEM225Q6GV28 225 aa10.64□□□□□ -0.71
PRPF39-203ENST00000477626 ZNF813Q6ZN06 617 aa10.64□□□□□ -0.71
PRPF39-203ENST00000477626 Q6ZS92 163 aa10.64□□□□□ -0.71
PRPF39-203ENST00000477626 FCRLAQ7L513 359 aa10.64□□□□□ -0.71
PRPF39-203ENST00000477626 YIPF7Q8N8F6 280 aa10.64□□□□□ -0.71
PRPF39-203ENST00000477626 GP6Q9HCN6 339 aa10.64□□□□□ -0.71
PRPF39-203ENST00000477626 CRNNQ9UBG3 495 aaPredicted RBP10.64□□□□□ -0.71
PRPF39-203ENST00000477626 ISPDA4D126 451 aa10.63□□□□□ -0.71
PRPF39-203ENST00000477626 ICMTO60725 284 aa10.63□□□□□ -0.71
PRPF39-203ENST00000477626 SLC43A1O75387 559 aa10.63□□□□□ -0.71
PRPF39-203ENST00000477626 ACSM4P0C7M7 580 aa10.63□□□□□ -0.71
PRPF39-203ENST00000477626 POU3F2P20265 443 aaPredicted RBP10.63□□□□□ -0.71
PRPF39-203ENST00000477626 PPP3R1P63098 170 aa10.63□□□□□ -0.71
PRPF39-203ENST00000477626 RPUSD3Q6P087 351 aaKnown RBP10.63□□□□□ -0.71
PRPF39-203ENST00000477626 SEM1Q6ZVN7 128 aa10.63□□□□□ -0.71
PRPF39-203ENST00000477626 RBMXL3Q8N7X1 1067 aaKnown RBP10.63□□□□□ -0.71
PRPF39-203ENST00000477626 NSMAFQ92636 917 aa10.63□□□□□ -0.71
PRPF39-203ENST00000477626 SFXN2Q96NB2 322 aa10.63□□□□□ -0.71
PRPF39-203ENST00000477626 SOX7Q9BT81 388 aa10.63□□□□□ -0.71
PRPF39-203ENST00000477626 B3GNT2Q9NY97 397 aa10.63□□□□□ -0.71
PRPF39-203ENST00000477626 SMIM30A4D0T7 59 aa10.63□□□□□ -0.71
PRPF39-203ENST00000477626 AQP7O14520 342 aa10.63□□□□□ -0.71
PRPF39-203ENST00000477626 RER1O15258 196 aa10.63□□□□□ -0.71
PRPF39-203ENST00000477626 PLA2G10O15496 165 aa10.63□□□□□ -0.71
PRPF39-203ENST00000477626 DHHO43323 396 aa10.63□□□□□ -0.71
PRPF39-203ENST00000477626 BTCP35070 178 aa10.63□□□□□ -0.71
PRPF39-203ENST00000477626 CASRP41180 1078 aa10.63□□□□□ -0.71
PRPF39-203ENST00000477626 GPAT4Q86UL3 456 aa10.63□□□□□ -0.71
PRPF39-203ENST00000477626 THEM6Q8WUY1 208 aa10.63□□□□□ -0.71
PRPF39-203ENST00000477626 ABCG5Q9H222 651 aa10.63□□□□□ -0.71
PRPF39-203ENST00000477626 GPR35Q9HC97 309 aa10.63□□□□□ -0.71
PRPF39-203ENST00000477626 KLRC4-KLRK1H3BQV0 150 aa10.63□□□□□ -0.71
PRPF39-203ENST00000477626 TGM6O95932 706 aa10.63□□□□□ -0.71
PRPF39-203ENST00000477626 PPIAP62937 165 aaKnown RBP10.63□□□□□ -0.71
PRPF39-203ENST00000477626 XKRXQ6PP77 449 aa10.63□□□□□ -0.71
PRPF39-203ENST00000477626 SCNM1Q9BWG6 230 aa10.63□□□□□ -0.71
PRPF39-203ENST00000477626 C6orf62Q9GZU0 229 aaPredicted RBP10.63□□□□□ -0.71
PRPF39-203ENST00000477626 RBMX2Q9Y388 322 aaKnown RBP10.63□□□□□ -0.71
PRPF39-203ENST00000477626 A0A0B4J203 849 aa10.62□□□□□ -0.71
PRPF39-203ENST00000477626 FAM166BA8MTA8 275 aa10.62□□□□□ -0.71
PRPF39-203ENST00000477626 CTDSPLO15194 276 aa10.62□□□□□ -0.71
PRPF39-203ENST00000477626 SSX4O60224 188 aa10.62□□□□□ -0.71
PRPF39-203ENST00000477626 MSR1P21757 451 aa10.62□□□□□ -0.71
PRPF39-203ENST00000477626 GTF2E2P29084 291 aaKnown RBP10.62□□□□□ -0.71
PRPF39-203ENST00000477626 C1orf100Q5SVJ3 147 aa10.62□□□□□ -0.71
PRPF39-203ENST00000477626 CENPSQ8N2Z9 138 aa10.62□□□□□ -0.71
PRPF39-203ENST00000477626 MRPL48Q96GC5 212 aaKnown RBP10.62□□□□□ -0.71
PRPF39-203ENST00000477626 NOX3Q9HBY0 568 aa10.62□□□□□ -0.71
PRPF39-203ENST00000477626 RAB3BP20337 219 aa10.62□□□□□ -0.71
PRPF39-203ENST00000477626 ACHEP22303 614 aa10.62□□□□□ -0.71
PRPF39-203ENST00000477626 SLC36A2Q495M3 483 aa10.62□□□□□ -0.71
PRPF39-203ENST00000477626 OR7E24Q6IFN5 339 aa10.62□□□□□ -0.71
PRPF39-203ENST00000477626 RNF144BQ7Z419 303 aa10.62□□□□□ -0.71
PRPF39-203ENST00000477626 ABTB1Q969K4 478 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms