RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 GPR6P46095 362 aaPredicted RBP18.53■□□□□ 0.56
COL9A3-211ENST00000477612 HTR5AP47898 357 aa18.53■□□□□ 0.56
COL9A3-211ENST00000477612 CCL8P80075 99 aa18.53■□□□□ 0.56
COL9A3-211ENST00000477612 SPATA46Q5T0L3 261 aa18.53■□□□□ 0.56
COL9A3-211ENST00000477612 LEG1Q6P5S2 330 aa18.53■□□□□ 0.56
COL9A3-211ENST00000477612 JAZF1Q86VZ6 243 aa18.53■□□□□ 0.56
COL9A3-211ENST00000477612 DDOQ99489 341 aa18.53■□□□□ 0.56
COL9A3-211ENST00000477612 IFT27Q9BW83 186 aa18.53■□□□□ 0.56
COL9A3-211ENST00000477612 J3QW42 95 aa18.52■□□□□ 0.56
COL9A3-211ENST00000477612 ABHD16AO95870 558 aa18.52■□□□□ 0.56
COL9A3-211ENST00000477612 TGFAP01135 160 aa18.52■□□□□ 0.56
COL9A3-211ENST00000477612 GASTP01350 101 aa18.52■□□□□ 0.56
COL9A3-211ENST00000477612 IGFBP5P24593 272 aa18.52■□□□□ 0.56
COL9A3-211ENST00000477612 ZNF81P51508 661 aa18.52■□□□□ 0.56
COL9A3-211ENST00000477612 TEKQ02763 1124 aa18.52■□□□□ 0.56
COL9A3-211ENST00000477612 FAM98BQ52LJ0 330 aaKnown RBP18.52■□□□□ 0.56
COL9A3-211ENST00000477612 RASSF6Q6ZTQ3 369 aa18.52■□□□□ 0.56
COL9A3-211ENST00000477612 NPEPL1Q8NDH3 523 aa18.52■□□□□ 0.56
COL9A3-211ENST00000477612 GJC3Q8NFK1 279 aa18.52■□□□□ 0.56
COL9A3-211ENST00000477612 SLC26A10Q8NG04 563 aa18.52■□□□□ 0.56
COL9A3-211ENST00000477612 OR9Q2Q8NGE9 314 aa18.52■□□□□ 0.56
COL9A3-211ENST00000477612 OR4K13Q8NH42 304 aa18.52■□□□□ 0.56
COL9A3-211ENST00000477612 OR1F12Q8NHA8 337 aa18.52■□□□□ 0.56
COL9A3-211ENST00000477612 COG8Q96MW5 612 aa18.52■□□□□ 0.56
COL9A3-211ENST00000477612 DCLRE1CQ96SD1 692 aaKnown RBP18.52■□□□□ 0.56
COL9A3-211ENST00000477612 SRA1Q9HD15 236 aaKnown RBP18.52■□□□□ 0.56
COL9A3-211ENST00000477612 CDH10Q9Y6N8 788 aa18.52■□□□□ 0.56
COL9A3-211ENST00000477612 OR6C68A6NDL8 312 aa18.51■□□□□ 0.55
COL9A3-211ENST00000477612 BHLHE40O14503 412 aa18.51■□□□□ 0.55
COL9A3-211ENST00000477612 ACOT8O14734 319 aa18.51■□□□□ 0.55
COL9A3-211ENST00000477612 IGHV1-46P01743 117 aa18.51■□□□□ 0.55
COL9A3-211ENST00000477612 NOS3P29474 1203 aa18.51■□□□□ 0.55
COL9A3-211ENST00000477612 CDH15P55291 814 aa18.51■□□□□ 0.55
COL9A3-211ENST00000477612 GLO1Q04760 184 aa18.51■□□□□ 0.55
COL9A3-211ENST00000477612 COX10Q12887 443 aa18.51■□□□□ 0.55
COL9A3-211ENST00000477612 TRAP1Q12931 704 aaKnown RBP18.51■□□□□ 0.55
COL9A3-211ENST00000477612 PSG7Q13046 419 aa18.51■□□□□ 0.55
COL9A3-211ENST00000477612 OTPQ5XKR4 325 aa18.51■□□□□ 0.55
COL9A3-211ENST00000477612 OR2T5Q6IEZ7 315 aa18.51■□□□□ 0.55
COL9A3-211ENST00000477612 LINC01356Q8N9X3 169 aa18.51■□□□□ 0.55
COL9A3-211ENST00000477612 OR2T29Q8NH02 315 aa18.51■□□□□ 0.55
COL9A3-211ENST00000477612 GTF3AQ92664 365 aaKnown RBP18.51■□□□□ 0.55
COL9A3-211ENST00000477612 EGLN3Q9H6Z9 239 aa18.51■□□□□ 0.55
COL9A3-211ENST00000477612 ZDHHC8Q9ULC8 765 aa18.51■□□□□ 0.55
COL9A3-211ENST00000477612 LHFPL6Q9Y693 200 aa18.51■□□□□ 0.55
COL9A3-211ENST00000477612 FBN1P35555 2871 aaKnown RBP18.5■□□□□ 0.55
COL9A3-211ENST00000477612 DYSFO75923 2080 aa18.5■□□□□ 0.55
COL9A3-211ENST00000477612 PLSCR5A0PG75 271 aa18.5■□□□□ 0.55
COL9A3-211ENST00000477612 RER1O15258 196 aa18.5■□□□□ 0.55
COL9A3-211ENST00000477612 CCNB2O95067 398 aa18.5■□□□□ 0.55
COL9A3-211ENST00000477612 GPANK1O95872 356 aa18.5■□□□□ 0.55
COL9A3-211ENST00000477612 IFNA2P01563 188 aa18.5■□□□□ 0.55
COL9A3-211ENST00000477612 CD55P08174 381 aa18.5■□□□□ 0.55
COL9A3-211ENST00000477612 KITLGP21583 273 aa18.5■□□□□ 0.55
COL9A3-211ENST00000477612 GK3PQ14409 553 aa18.5■□□□□ 0.55
COL9A3-211ENST00000477612 MICAQ29983 383 aa18.5■□□□□ 0.55
COL9A3-211ENST00000477612 ZNF362Q5T0B9 420 aaPredicted RBP18.5■□□□□ 0.55
COL9A3-211ENST00000477612 TRPM8Q7Z2W7 1104 aa18.5■□□□□ 0.55
COL9A3-211ENST00000477612 DIRC2Q96SL1 478 aa18.5■□□□□ 0.55
COL9A3-211ENST00000477612 COQ7Q99807 217 aa18.5■□□□□ 0.55
COL9A3-211ENST00000477612 BEX2Q9BXY8 128 aa18.5■□□□□ 0.55
COL9A3-211ENST00000477612 SHARPINQ9H0F6 387 aa18.5■□□□□ 0.55
COL9A3-211ENST00000477612 RPRD1BQ9NQG5 326 aaKnown RBP18.5■□□□□ 0.55
COL9A3-211ENST00000477612 DECR2Q9NUI1 292 aa18.5■□□□□ 0.55
COL9A3-211ENST00000477612 DNHD1Q96M86 4753 aa18.5■□□□□ 0.55
COL9A3-211ENST00000477612 ATRQ13535 2644 aa18.49■□□□□ 0.55
COL9A3-211ENST00000477612 IGHV1-69-2A0A0G2JMI3 117 aa18.49■□□□□ 0.55
COL9A3-211ENST00000477612 ZSCAN5BA6NJL1 495 aa18.49■□□□□ 0.55
COL9A3-211ENST00000477612 TFP02787 698 aa18.49■□□□□ 0.55
COL9A3-211ENST00000477612 RAP2AP10114 183 aa18.49■□□□□ 0.55
COL9A3-211ENST00000477612 GSTM3P21266 225 aa18.49■□□□□ 0.55
COL9A3-211ENST00000477612 TSTQ16762 297 aaKnown RBP18.49■□□□□ 0.55
COL9A3-211ENST00000477612 MEP1BQ16820 701 aa18.49■□□□□ 0.55
COL9A3-211ENST00000477612 SDR9C7Q8NEX9 313 aa18.49■□□□□ 0.55
COL9A3-211ENST00000477612 OR52L1Q8NGH7 329 aa18.49■□□□□ 0.55
COL9A3-211ENST00000477612 OR52E2Q8NGJ4 325 aa18.49■□□□□ 0.55
COL9A3-211ENST00000477612 CLDND2Q8NHS1 167 aa18.49■□□□□ 0.55
COL9A3-211ENST00000477612 BCAS4Q8TDM0 211 aa18.49■□□□□ 0.55
COL9A3-211ENST00000477612 SLC7A6Q92536 515 aa18.49■□□□□ 0.55
COL9A3-211ENST00000477612 PTP4A1Q93096 173 aa18.49■□□□□ 0.55
COL9A3-211ENST00000477612 CLPTM1LQ96KA5 538 aa18.49■□□□□ 0.55
COL9A3-211ENST00000477612 DGCR6LQ9BY27 220 aa18.49■□□□□ 0.55
COL9A3-211ENST00000477612 PLA2G12AQ9BZM1 189 aa18.49■□□□□ 0.55
COL9A3-211ENST00000477612 HDHD2Q9H0R4 259 aa18.49■□□□□ 0.55
COL9A3-211ENST00000477612 POFUT1Q9H488 388 aa18.49■□□□□ 0.55
COL9A3-211ENST00000477612 SAP30LQ9HAJ7 183 aa18.49■□□□□ 0.55
COL9A3-211ENST00000477612 VNN3Q9NY84 501 aa18.49■□□□□ 0.55
COL9A3-211ENST00000477612 STARD10Q9Y365 291 aa18.49■□□□□ 0.55
COL9A3-211ENST00000477612 GRIP1Q9Y3R0 1128 aa18.49■□□□□ 0.55
COL9A3-211ENST00000477612 MXRA5Q9NR99 2828 aa18.48■□□□□ 0.55
COL9A3-211ENST00000477612 PPIHO43447 177 aaKnown RBP18.48■□□□□ 0.55
COL9A3-211ENST00000477612 CDC14BO60729 498 aa18.48■□□□□ 0.55
COL9A3-211ENST00000477612 THBS2P35442 1172 aa18.48■□□□□ 0.55
COL9A3-211ENST00000477612 RGS6P49758 472 aa18.48■□□□□ 0.55
COL9A3-211ENST00000477612 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.48■□□□□ 0.55
COL9A3-211ENST00000477612 PPP1R8Q12972 351 aaKnown RBP18.48■□□□□ 0.55
COL9A3-211ENST00000477612 CDK5R2Q13319 367 aa18.48■□□□□ 0.55
COL9A3-211ENST00000477612 RSPO1Q2MKA7 263 aaPredicted RBP18.48■□□□□ 0.55
COL9A3-211ENST00000477612 KRTAP27-1Q3LI81 207 aa18.48■□□□□ 0.55
COL9A3-211ENST00000477612 SLC36A3Q495N2 470 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms