RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 IDH3GP51553 393 aaPredicted RBP14.09□□□□□ -0.15
VHL-203ENST00000477538 SLC35A2P78381 396 aa14.09□□□□□ -0.15
VHL-203ENST00000477538 PLP2Q04941 152 aa14.09□□□□□ -0.15
VHL-203ENST00000477538 RAB39AQ14964 217 aa14.09□□□□□ -0.15
VHL-203ENST00000477538 ELFN2Q5R3F8 820 aa14.09□□□□□ -0.15
VHL-203ENST00000477538 SPATC1Q76KD6 591 aa14.09□□□□□ -0.15
VHL-203ENST00000477538 VASH1Q7L8A9 365 aaPredicted RBP14.09□□□□□ -0.15
VHL-203ENST00000477538 SSX6Q7RTT6 188 aa14.09□□□□□ -0.15
VHL-203ENST00000477538 WFDC8Q8IUA0 241 aa14.09□□□□□ -0.15
VHL-203ENST00000477538 ALDH16A1Q8IZ83 802 aa14.09□□□□□ -0.15
VHL-203ENST00000477538 OR10S1Q8NGN2 331 aa14.09□□□□□ -0.15
VHL-203ENST00000477538 LINC01560Q8TB33 94 aa14.09□□□□□ -0.15
VHL-203ENST00000477538 ASB17Q8WXJ9 295 aa14.09□□□□□ -0.15
VHL-203ENST00000477538 HDHD2Q9H0R4 259 aa14.09□□□□□ -0.15
VHL-203ENST00000477538 PNRC2Q9NPJ4 139 aaKnown RBP14.09□□□□□ -0.15
VHL-203ENST00000477538 INPP5EQ9NRR6 644 aa14.09□□□□□ -0.15
VHL-203ENST00000477538 FBXL3Q9UKT7 428 aa14.09□□□□□ -0.15
VHL-203ENST00000477538 DIMT1Q9UNQ2 313 aaKnown RBP14.09□□□□□ -0.15
VHL-203ENST00000477538 SPTAN1Q13813 2472 aaKnown RBP14.09□□□□□ -0.15
VHL-203ENST00000477538 PLCE1Q9P212 2302 aa14.08□□□□□ -0.16
VHL-203ENST00000477538 IQCMA0A1B0GVH7 501 aa14.08□□□□□ -0.16
VHL-203ENST00000477538 ZNF878C9JN71 531 aa14.08□□□□□ -0.16
VHL-203ENST00000477538 SYNGR3O43761 229 aa14.08□□□□□ -0.16
VHL-203ENST00000477538 IGKV3-15P01624 115 aa14.08□□□□□ -0.16
VHL-203ENST00000477538 SERPINA5P05154 406 aa14.08□□□□□ -0.16
VHL-203ENST00000477538 ADRA2AP08913 450 aa14.08□□□□□ -0.16
VHL-203ENST00000477538 ZNF14P17017 642 aaPredicted RBP14.08□□□□□ -0.16
VHL-203ENST00000477538 EEF1B2P24534 225 aaKnown RBP14.08□□□□□ -0.16
VHL-203ENST00000477538 HTR5AP47898 357 aa14.08□□□□□ -0.16
VHL-203ENST00000477538 ZNF83P51522 516 aa14.08□□□□□ -0.16
VHL-203ENST00000477538 CHN2P52757 468 aa14.08□□□□□ -0.16
VHL-203ENST00000477538 GABARAPL2P60520 117 aa14.08□□□□□ -0.16
VHL-203ENST00000477538 MVKQ03426 396 aa14.08□□□□□ -0.16
VHL-203ENST00000477538 ZNF85Q03923 595 aa14.08□□□□□ -0.16
VHL-203ENST00000477538 KCTD18Q6PI47 426 aaPredicted RBP14.08□□□□□ -0.16
VHL-203ENST00000477538 ZNF322Q6U7Q0 402 aaPredicted RBP14.08□□□□□ -0.16
VHL-203ENST00000477538 SEZ6L2Q6UXD5 910 aa14.08□□□□□ -0.16
VHL-203ENST00000477538 ZNF584Q8IVC4 421 aa14.08□□□□□ -0.16
VHL-203ENST00000477538 FAM169BQ8N8A8 192 aa14.08□□□□□ -0.16
VHL-203ENST00000477538 CPEB3Q8NE35 698 aaKnown RBP14.08□□□□□ -0.16
VHL-203ENST00000477538 RNF133Q8WVZ7 376 aa14.08□□□□□ -0.16
VHL-203ENST00000477538 SGCDQ92629 289 aa14.08□□□□□ -0.16
VHL-203ENST00000477538 ATF6BQ99941 703 aa14.08□□□□□ -0.16
VHL-203ENST00000477538 JAM3Q9BX67 310 aa14.08□□□□□ -0.16
VHL-203ENST00000477538 DUSP21Q9H596 190 aa14.08□□□□□ -0.16
VHL-203ENST00000477538 CENPMQ9NSP4 180 aa14.08□□□□□ -0.16
VHL-203ENST00000477538 ERVK13-1Q9NX77 482 aa14.08□□□□□ -0.16
VHL-203ENST00000477538 NPAP1Q9NZP6 1156 aa14.08□□□□□ -0.16
VHL-203ENST00000477538 ERVK-18Q9QC07 812 aa14.08□□□□□ -0.16
VHL-203ENST00000477538 CRNNQ9UBG3 495 aaPredicted RBP14.08□□□□□ -0.16
VHL-203ENST00000477538 EXOSC1Q9Y3B2 195 aaKnown RBP14.08□□□□□ -0.16
VHL-203ENST00000477538 TENM4Q6N022 2769 aa14.07□□□□□ -0.16
VHL-203ENST00000477538 OR6C6A6NF89 314 aa14.07□□□□□ -0.16
VHL-203ENST00000477538 PRR32B1ATL7 298 aa14.07□□□□□ -0.16
VHL-203ENST00000477538 PRSS44E7EML9 344 aa14.07□□□□□ -0.16
VHL-203ENST00000477538 M0R1B8 84 aa14.07□□□□□ -0.16
VHL-203ENST00000477538 RGS10O43665 173 aa14.07□□□□□ -0.16
VHL-203ENST00000477538 PTHP01270 115 aa14.07□□□□□ -0.16
VHL-203ENST00000477538 IGLV1-44P01699 117 aa14.07□□□□□ -0.16
VHL-203ENST00000477538 CDK1P06493 297 aa14.07□□□□□ -0.16
VHL-203ENST00000477538 CELA3BP08861 270 aa14.07□□□□□ -0.16
VHL-203ENST00000477538 COX5BP10606 129 aa14.07□□□□□ -0.16
VHL-203ENST00000477538 MYL12AP19105 171 aa14.07□□□□□ -0.16
VHL-203ENST00000477538 APEX1P27695 318 aaKnown RBP14.07□□□□□ -0.16
VHL-203ENST00000477538 LRRN1Q6UXK5 716 aa14.07□□□□□ -0.16
VHL-203ENST00000477538 KRT77Q7Z794 578 aa14.07□□□□□ -0.16
VHL-203ENST00000477538 LHFPL3Q86UP9 236 aa14.07□□□□□ -0.16
VHL-203ENST00000477538 OR1F12Q8NHA8 337 aa14.07□□□□□ -0.16
VHL-203ENST00000477538 MS4A3Q96HJ5 214 aa14.07□□□□□ -0.16
VHL-203ENST00000477538 DACH2Q96NX9 599 aa14.07□□□□□ -0.16
VHL-203ENST00000477538 OR8B4Q96RC9 309 aa14.07□□□□□ -0.16
VHL-203ENST00000477538 COQ7Q99807 217 aa14.07□□□□□ -0.16
VHL-203ENST00000477538 ALG8Q9BVK2 526 aa14.07□□□□□ -0.16
VHL-203ENST00000477538 NGBQ9NPG2 151 aa14.07□□□□□ -0.16
VHL-203ENST00000477538 DDX28Q9NUL7 540 aaKnown RBP14.07□□□□□ -0.16
VHL-203ENST00000477538 ATPIF1Q9UII2 106 aa14.07□□□□□ -0.16
VHL-203ENST00000477538 IKZF2Q9UKS7 526 aa14.07□□□□□ -0.16
VHL-203ENST00000477538 ABCA4P78363 2273 aa14.06□□□□□ -0.16
VHL-203ENST00000477538 IGHV1-18A0A0C4DH31 117 aa14.06□□□□□ -0.16
VHL-203ENST00000477538 PSMD9O00233 223 aa14.06□□□□□ -0.16
VHL-203ENST00000477538 TNFAIP8O95379 198 aa14.06□□□□□ -0.16
VHL-203ENST00000477538 H2BFMP0C1H6 154 aa14.06□□□□□ -0.16
VHL-203ENST00000477538 CECR9P0C854 216 aa14.06□□□□□ -0.16
VHL-203ENST00000477538 LIMS3P0CW19 117 aa14.06□□□□□ -0.16
VHL-203ENST00000477538 LIMS4P0CW20 117 aa14.06□□□□□ -0.16
VHL-203ENST00000477538 IGFBP2P18065 325 aa14.06□□□□□ -0.16
VHL-203ENST00000477538 STOMP27105 288 aa14.06□□□□□ -0.16
VHL-203ENST00000477538 C21orf33P30042 268 aaPredicted RBP14.06□□□□□ -0.16
VHL-203ENST00000477538 APLNRP35414 380 aa14.06□□□□□ -0.16
VHL-203ENST00000477538 OPRL1P41146 370 aa14.06□□□□□ -0.16
VHL-203ENST00000477538 KIR2DL3P43628 341 aa14.06□□□□□ -0.16
VHL-203ENST00000477538 ETV1P50549 477 aa14.06□□□□□ -0.16
VHL-203ENST00000477538 EGR3Q06889 387 aa14.06□□□□□ -0.16
VHL-203ENST00000477538 ECH1Q13011 328 aa14.06□□□□□ -0.16
VHL-203ENST00000477538 GALEQ14376 348 aa14.06□□□□□ -0.16
VHL-203ENST00000477538 TAF13Q15543 124 aa14.06□□□□□ -0.16
VHL-203ENST00000477538 C3orf36Q3SXR2 165 aa14.06□□□□□ -0.16
VHL-203ENST00000477538 KCTD21Q4G0X4 260 aa14.06□□□□□ -0.16
VHL-203ENST00000477538 RHOUQ7L0Q8 258 aa14.06□□□□□ -0.16
VHL-203ENST00000477538 MYPOPQ86VE0 399 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms