RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 GLULP15104 373 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 CLDN6P56747 220 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 PDSS1Q5T2R2 415 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 CPEB2Q7Z5Q1 589 aaKnown RBP9.94□□□□□ -0.82
COL27A1-204ENST00000477421 FAM109AQ8N4B1 249 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 ZNF454Q8N9F8 522 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 OR4C16Q8NGL9 310 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 OR52N5Q8NH56 324 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 APOBEC4Q8WW27 367 aaKnown RBP9.94□□□□□ -0.82
COL27A1-204ENST00000477421 CMBLQ96DG6 245 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 PRRT1Q99946 306 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 MBD2Q9UBB5 411 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 LRP12Q9Y561 859 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 TRAV1-2A0A0B4J238 106 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 IGHV3-64DA0A0J9YX35 117 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 CIB4A0PJX0 185 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 PYCARD-AS1I3L0S3 204 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 OR7C1O76099 320 aaPredicted RBP9.94□□□□□ -0.82
COL27A1-204ENST00000477421 CRYZL1O95825 349 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 GUSBP08236 651 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 GAAP10253 952 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 POU3F2P20265 443 aaPredicted RBP9.94□□□□□ -0.82
COL27A1-204ENST00000477421 PTBP1P26599 531 aaKnown RBP eCLIP9.94□□□□□ -0.82
COL27A1-204ENST00000477421 AGTR1P30556 359 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 HTR5AP47898 357 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 PER3P56645 1201 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 MFAP5Q13361 173 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 SLC25A30Q5SVS4 291 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 UNQ6126/PRO20091Q6UXV3 157 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 DND1Q8IYX4 353 aaKnown RBP9.94□□□□□ -0.82
COL27A1-204ENST00000477421 SLC43A2Q8N370 569 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 FAM71CQ8NEG0 241 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 TSNAXQ99598 290 aaKnown RBP9.94□□□□□ -0.82
COL27A1-204ENST00000477421 SLX1AQ9BQ83 275 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 GPR84Q9NQS5 396 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 ASF1BQ9NVP2 202 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 GGT3PA6NGU5 568 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 SCO1O75880 301 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 RGS11O94810 467 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 TP53P04637 393 aaPredicted RBP9.94□□□□□ -0.82
COL27A1-204ENST00000477421 GNRHRP30968 328 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 SSR4P51571 173 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 NANOS3P60323 173 aaKnown RBP9.94□□□□□ -0.82
COL27A1-204ENST00000477421 ST3GAL2Q16842 350 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 MESTQ5EB52 335 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 B3GNTL1Q67FW5 361 aaPredicted RBP9.94□□□□□ -0.82
COL27A1-204ENST00000477421 PWWP2BQ6NUJ5 590 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 MEX3BQ6ZN04 569 aaKnown RBP9.94□□□□□ -0.82
COL27A1-204ENST00000477421 CREB3L2Q70SY1 520 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 Q7L0L9 218 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 ADGRE4PQ86SQ3 457 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 MISPQ8IVT2 679 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 LSMEM1Q8N8F7 131 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 PRR7Q8TB68 274 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 YIPF5Q969M3 257 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 SLC23A1Q9UHI7 598 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 HIF3AQ9Y2N7 669 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 HRH3Q9Y5N1 445 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 ETV7Q9Y603 341 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 KIF26BQ2KJY2 2108 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 MDC1Q14676 2089 aaKnown RBP9.94□□□□□ -0.82
COL27A1-204ENST00000477421 STMND1H3BQB6 276 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 APOBEC1P41238 236 aaKnown RBP9.93□□□□□ -0.82
COL27A1-204ENST00000477421 DOC2BQ14184 412 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 C16orf54Q6UWD8 224 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 AAED1Q7RTV5 226 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 GTPBP8Q8N3Z3 284 aaPredicted RBP9.93□□□□□ -0.82
COL27A1-204ENST00000477421 SLC22A24Q8N4F4 322 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 ESX1Q8N693 406 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 BHLHE23Q8NDY6 225 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 CCDC74BQ96LY2 380 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 OR8B4Q96RC9 309 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 MNTQ99583 582 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 POFUT1Q9H488 388 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 PPP1R3EQ9H7J1 279 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 FRRS1LQ9P0K9 344 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 PADI1Q9ULC6 663 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 TRPM7Q96QT4 1865 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 NLRC5Q86WI3 1866 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 TRAV8-7A0A075B6U6 113 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 RAF1P04049 648 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 TMIGD3P0DMS9 266 aaPredicted RBP9.93□□□□□ -0.82
COL27A1-204ENST00000477421 HLA-DOBP13765 273 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 ABOP16442 354 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 LAP3P28838 519 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 MMP15P51511 669 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 SEC61A1P61619 476 aaKnown RBP9.93□□□□□ -0.82
COL27A1-204ENST00000477421 HLA-BQ31612 363 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 EMC4Q5J8M3 183 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 PXKQ7Z7A4 578 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 LIX1LQ8IVB5 337 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 ZNF680Q8NEM1 530 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 IFI44Q8TCB0 444 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 MARVELD1Q9BSK0 173 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 SLC5A7Q9GZV3 580 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 NXF2Q9GZY0 626 aaKnown RBP9.93□□□□□ -0.82
COL27A1-204ENST00000477421 MLXQ9UH92 298 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 MTCH2Q9Y6C9 303 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 TEX51A0A1B0GUA7 166 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 ADAM11O75078 769 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms