RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 PRTGQ2VWP7 1150 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 TMEM249Q2WGJ8 235 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 RFX4Q33E94 735 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 BSXQ3C1V8 233 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 MANEAQ5SRI9 462 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 FNDC7Q5VTL7 733 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 BSPRYQ5W0U4 402 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 FRMPD2BQ6IN97 320 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 STAC2Q6ZMT1 411 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 FRRS1Q6ZNA5 592 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 STOX1Q6ZVD7 989 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 USP43Q70EL4 1123 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 NT5DC3Q86UY8 548 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 OR4N5Q8IXE1 308 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 DND1Q8IYX4 353 aaKnown RBP2.46□□□□□ -2.02
HMGN4-202ENST00000477243 STPG2Q8N412 459 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 ZNF740Q8NDX6 193 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 LFNGQ8NES3 379 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 OR2L2Q8NH16 312 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 OR6X1Q8NH79 312 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 Q8TCH9 128 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 CXorf40AQ8TE69 158 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 PYROXD1Q8WU10 500 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 DNASE2BQ8WZ79 361 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 SEC22AQ96IW7 307 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 HSFY1Q96LI6 401 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 RBBP8Q99708 897 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 FAM173AQ9BQD7 235 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 CALN1Q9BXU9 219 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 SHARPINQ9H0F6 387 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 MMP28Q9H239 520 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 GLIPR2Q9H4G4 154 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 DHX35Q9H5Z1 703 aaKnown RBP2.46□□□□□ -2.02
HMGN4-202ENST00000477243 PLCXD1Q9NUJ7 323 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 EXD2Q9NVH0 621 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 FGFR1OP2Q9NVK5 253 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 SDHAF2Q9NX18 166 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 BABAM2Q9NXR7 383 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 MSRB1Q9NZV6 116 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 FOXJ2Q9P0K8 574 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 WRAP73Q9P2S5 460 aaPredicted RBP2.46□□□□□ -2.02
HMGN4-202ENST00000477243 SLC17A6Q9P2U8 582 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 UVRAGQ9P2Y5 699 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 POU2F3Q9UKI9 436 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 FBXL3Q9UKT7 428 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 RCL1Q9Y2P8 373 aaKnown RBP2.46□□□□□ -2.02
HMGN4-202ENST00000477243 KCNIP3Q9Y2W7 256 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 ZNF337Q9Y3M9 751 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 TIMM22Q9Y584 194 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 WIF1Q9Y5W5 379 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 PTGDR2Q9Y5Y4 395 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 CSNK1G3Q9Y6M4 447 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 USH1CQ9Y6N9 552 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 ZNF646O15015 1829 aaPredicted RBP2.46□□□□□ -2.02
HMGN4-202ENST00000477243 AFDNP55196 1824 aaKnown RBP2.46□□□□□ -2.02
HMGN4-202ENST00000477243 DCHS2Q6V1P9 2916 aa2.45□□□□□ -2.02
HMGN4-202ENST00000477243 MN1Q10571 1320 aaPredicted RBP2.45□□□□□ -2.02
HMGN4-202ENST00000477243 ZNF521Q96K83 1311 aa2.45□□□□□ -2.02
HMGN4-202ENST00000477243 A0A0A6YYD5 115 aa2.45□□□□□ -2.02
HMGN4-202ENST00000477243 IGLV9-49A0A0B4J1Y8 123 aa2.45□□□□□ -2.02
HMGN4-202ENST00000477243 A0A1B0GTH9 108 aa2.45□□□□□ -2.02
HMGN4-202ENST00000477243 A0A1W2PQL4 384 aaPredicted RBP2.45□□□□□ -2.02
HMGN4-202ENST00000477243 FAM231BA6NCW3 169 aa2.45□□□□□ -2.02
HMGN4-202ENST00000477243 EFCAB7A8K855 629 aa2.45□□□□□ -2.02
HMGN4-202ENST00000477243 LYRM9A8MSI8 78 aa2.45□□□□□ -2.02
HMGN4-202ENST00000477243 RNF212BA8MTL3 300 aa2.45□□□□□ -2.02
HMGN4-202ENST00000477243 HACD1B0YJ81 288 aa2.45□□□□□ -2.02
HMGN4-202ENST00000477243 ZNF814B7Z6K7 855 aa2.45□□□□□ -2.02
HMGN4-202ENST00000477243 ANHXE9PGG2 379 aa2.45□□□□□ -2.02
HMGN4-202ENST00000477243 K7ERI5 159 aa2.45□□□□□ -2.02
HMGN4-202ENST00000477243 M0QZ92 97 aa2.45□□□□□ -2.02
HMGN4-202ENST00000477243 PPP1R2P9O14990 202 aa2.45□□□□□ -2.02
HMGN4-202ENST00000477243 INPP4BO15327 924 aa2.45□□□□□ -2.02
HMGN4-202ENST00000477243 ATP6V0E1O15342 81 aa2.45□□□□□ -2.02
HMGN4-202ENST00000477243 IDH3BO43837 385 aa2.45□□□□□ -2.02
HMGN4-202ENST00000477243 TYROBPO43914 113 aa2.45□□□□□ -2.02
HMGN4-202ENST00000477243 CDC40O60508 579 aaKnown RBP eCLIP2.45□□□□□ -2.02
HMGN4-202ENST00000477243 UGT1A9O60656 530 aa2.45□□□□□ -2.02
HMGN4-202ENST00000477243 HPGDSO60760 199 aa2.45□□□□□ -2.02
HMGN4-202ENST00000477243 ALOX12BO75342 701 aa2.45□□□□□ -2.02
HMGN4-202ENST00000477243 ADAP1O75689 374 aa2.45□□□□□ -2.02
HMGN4-202ENST00000477243 TRAPPC6AO75865 159 aa2.45□□□□□ -2.02
HMGN4-202ENST00000477243 RAB36O95755 333 aa2.45□□□□□ -2.02
HMGN4-202ENST00000477243 CLIC3O95833 236 aa2.45□□□□□ -2.02
HMGN4-202ENST00000477243 NUDT14O95848 222 aa2.45□□□□□ -2.02
HMGN4-202ENST00000477243 SYF2O95926 243 aaKnown RBP2.45□□□□□ -2.02
HMGN4-202ENST00000477243 OAS1P00973 400 aaKnown RBP2.45□□□□□ -2.02
HMGN4-202ENST00000477243 HMGN1P05114 100 aa2.45□□□□□ -2.02
HMGN4-202ENST00000477243 RPLP0P05388 317 aaKnown RBP2.45□□□□□ -2.02
HMGN4-202ENST00000477243 THRAP10827 490 aa2.45□□□□□ -2.02
HMGN4-202ENST00000477243 HLA-GP17693 338 aa2.45□□□□□ -2.02
HMGN4-202ENST00000477243 RPL35AP18077 110 aaKnown RBP2.45□□□□□ -2.02
HMGN4-202ENST00000477243 C4BPBP20851 252 aa2.45□□□□□ -2.02
HMGN4-202ENST00000477243 GPD1P21695 349 aa2.45□□□□□ -2.02
HMGN4-202ENST00000477243 RPS12P25398 132 aaKnown RBP2.45□□□□□ -2.02
HMGN4-202ENST00000477243 LOXP28300 417 aaPredicted RBP2.45□□□□□ -2.02
HMGN4-202ENST00000477243 SSTR2P30874 369 aa2.45□□□□□ -2.02
HMGN4-202ENST00000477243 GTF2H1P32780 548 aa2.45□□□□□ -2.02
HMGN4-202ENST00000477243 DDOSTP39656 456 aa2.45□□□□□ -2.02
HMGN4-202ENST00000477243 RFC3P40938 356 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms