RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 IFI30P13284 250 aa9.96□□□□□ -0.82
HDAC6-219ENST00000476625 TNFRSF1AP19438 455 aa9.96□□□□□ -0.82
HDAC6-219ENST00000476625 GSTM3P21266 225 aa9.96□□□□□ -0.82
HDAC6-219ENST00000476625 YAP1P46937 504 aaKnown RBP9.96□□□□□ -0.82
HDAC6-219ENST00000476625 RPL27P61353 136 aaKnown RBP9.96□□□□□ -0.82
HDAC6-219ENST00000476625 ZMAT1Q5H9K5 638 aa9.96□□□□□ -0.82
HDAC6-219ENST00000476625 BTNL3Q6UXE8 466 aa9.96□□□□□ -0.82
HDAC6-219ENST00000476625 LRRN1Q6UXK5 716 aa9.96□□□□□ -0.82
HDAC6-219ENST00000476625 VASH1Q7L8A9 365 aaPredicted RBP9.96□□□□□ -0.82
HDAC6-219ENST00000476625 SLC30A8Q8IWU4 369 aa9.96□□□□□ -0.82
HDAC6-219ENST00000476625 PDZD9Q8IXQ8 264 aa9.96□□□□□ -0.82
HDAC6-219ENST00000476625 FGFRL1Q8N441 504 aa9.96□□□□□ -0.82
HDAC6-219ENST00000476625 OR13C2Q8NGS9 318 aa9.96□□□□□ -0.82
HDAC6-219ENST00000476625 OR51A7Q8NH64 312 aa9.96□□□□□ -0.82
HDAC6-219ENST00000476625 TLCD1Q96CP7 247 aa9.96□□□□□ -0.82
HDAC6-219ENST00000476625 SEMA6AQ9H2E6 1030 aa9.96□□□□□ -0.82
HDAC6-219ENST00000476625 MMP27Q9H306 513 aa9.96□□□□□ -0.82
HDAC6-219ENST00000476625 KAT8Q9H7Z6 458 aaKnown RBP9.96□□□□□ -0.82
HDAC6-219ENST00000476625 EVA1AQ9H8M9 152 aa9.96□□□□□ -0.82
HDAC6-219ENST00000476625 SMURF2Q9HAU4 748 aa9.96□□□□□ -0.82
HDAC6-219ENST00000476625 BEX1Q9HBH7 125 aa9.96□□□□□ -0.82
HDAC6-219ENST00000476625 NKIRAS1Q9NYS0 192 aa9.96□□□□□ -0.82
HDAC6-219ENST00000476625 GMPR2Q9P2T1 348 aaKnown RBP9.96□□□□□ -0.82
HDAC6-219ENST00000476625 CTSZQ9UBR2 303 aa9.96□□□□□ -0.82
HDAC6-219ENST00000476625 CGGBP1Q9UFW8 167 aaPredicted RBP9.96□□□□□ -0.82
HDAC6-219ENST00000476625 ADAM18Q9Y3Q7 739 aa9.96□□□□□ -0.82
HDAC6-219ENST00000476625 KIR2DS1A0A191URI9 304 aa9.95□□□□□ -0.82
HDAC6-219ENST00000476625 CLPSL1A2RUU4 121 aa9.95□□□□□ -0.82
HDAC6-219ENST00000476625 H3BSA7 217 aa9.95□□□□□ -0.82
HDAC6-219ENST00000476625 J3KTA2 159 aa9.95□□□□□ -0.82
HDAC6-219ENST00000476625 FBP2O00757 339 aa9.95□□□□□ -0.82
HDAC6-219ENST00000476625 IGHV4-59P01825 116 aa9.95□□□□□ -0.82
HDAC6-219ENST00000476625 ZNF26P17031 533 aaPredicted RBP9.95□□□□□ -0.82
HDAC6-219ENST00000476625 MSR1P21757 451 aa9.95□□□□□ -0.82
HDAC6-219ENST00000476625 ANOS1P23352 680 aa9.95□□□□□ -0.82
HDAC6-219ENST00000476625 TNFSF4P23510 183 aa9.95□□□□□ -0.82
HDAC6-219ENST00000476625 PITPNBP48739 271 aa9.95□□□□□ -0.82
HDAC6-219ENST00000476625 DLX1P56177 255 aa9.95□□□□□ -0.82
HDAC6-219ENST00000476625 VMACQ2NL98 169 aa9.95□□□□□ -0.82
HDAC6-219ENST00000476625 ZNF404Q494X3 552 aa9.95□□□□□ -0.82
HDAC6-219ENST00000476625 CCDC92Q53HC0 331 aaPredicted RBP9.95□□□□□ -0.82
HDAC6-219ENST00000476625 RABL3Q5HYI8 236 aa9.95□□□□□ -0.82
HDAC6-219ENST00000476625 PRAMEF6Q5VXH4 476 aa9.95□□□□□ -0.82
HDAC6-219ENST00000476625 ZNF841Q6ZN19 808 aa9.95□□□□□ -0.82
HDAC6-219ENST00000476625 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.95□□□□□ -0.82
HDAC6-219ENST00000476625 PATL1Q86TB9 770 aaKnown RBP9.95□□□□□ -0.82
HDAC6-219ENST00000476625 ALDH16A1Q8IZ83 802 aa9.95□□□□□ -0.82
HDAC6-219ENST00000476625 MUC20Q8N307 709 aaPredicted RBP9.95□□□□□ -0.82
HDAC6-219ENST00000476625 OR4F5Q8NH21 305 aa9.95□□□□□ -0.82
HDAC6-219ENST00000476625 C10orf82Q8WW14 230 aa9.95□□□□□ -0.82
HDAC6-219ENST00000476625 HAVCR1Q96D42 359 aa9.95□□□□□ -0.82
HDAC6-219ENST00000476625 NEIL1Q96FI4 390 aaPredicted RBP9.95□□□□□ -0.82
HDAC6-219ENST00000476625 TBX15Q96SF7 602 aa9.95□□□□□ -0.82
HDAC6-219ENST00000476625 CCDC28BQ9BUN5 200 aa9.95□□□□□ -0.82
HDAC6-219ENST00000476625 ALG12Q9BV10 488 aa9.95□□□□□ -0.82
HDAC6-219ENST00000476625 RASSF4Q9H2L5 321 aa9.95□□□□□ -0.82
HDAC6-219ENST00000476625 RERGLQ9H628 205 aa9.95□□□□□ -0.82
HDAC6-219ENST00000476625 MAN2C1Q9NTJ4 1040 aa9.95□□□□□ -0.82
HDAC6-219ENST00000476625 TMCC3Q9ULS5 477 aa9.95□□□□□ -0.82
HDAC6-219ENST00000476625 HIF3AQ9Y2N7 669 aa9.95□□□□□ -0.82
HDAC6-219ENST00000476625 RNF114Q9Y508 228 aa9.95□□□□□ -0.82
HDAC6-219ENST00000476625 SNX13Q9Y5W8 968 aa9.95□□□□□ -0.82
HDAC6-219ENST00000476625 G3V4G9 280 aa9.94□□□□□ -0.82
HDAC6-219ENST00000476625 M0QZ24 198 aa9.94□□□□□ -0.82
HDAC6-219ENST00000476625 SGCEO43556 437 aa9.94□□□□□ -0.82
HDAC6-219ENST00000476625 CRYBA1P05813 215 aa9.94□□□□□ -0.82
HDAC6-219ENST00000476625 CTLA4P16410 223 aa9.94□□□□□ -0.82
HDAC6-219ENST00000476625 RBM34P42696 430 aaKnown RBP9.94□□□□□ -0.82
HDAC6-219ENST00000476625 ELF3P78545 371 aaPredicted RBP9.94□□□□□ -0.82
HDAC6-219ENST00000476625 GUCY1A3Q02108 690 aa9.94□□□□□ -0.82
HDAC6-219ENST00000476625 NFYCQ13952 458 aa9.94□□□□□ -0.82
HDAC6-219ENST00000476625 MEP1BQ16820 701 aa9.94□□□□□ -0.82
HDAC6-219ENST00000476625 MESTQ5EB52 335 aa9.94□□□□□ -0.82
HDAC6-219ENST00000476625 WDR25Q64LD2 544 aaPredicted RBP9.94□□□□□ -0.82
HDAC6-219ENST00000476625 HDDC2Q7Z4H3 204 aa9.94□□□□□ -0.82
HDAC6-219ENST00000476625 NPEPL1Q8NDH3 523 aa9.94□□□□□ -0.82
HDAC6-219ENST00000476625 OR8B3Q8NGG8 313 aa9.94□□□□□ -0.82
HDAC6-219ENST00000476625 LINC01006Q8NI28 216 aa9.94□□□□□ -0.82
HDAC6-219ENST00000476625 LIPHQ8WWY8 451 aa9.94□□□□□ -0.82
HDAC6-219ENST00000476625 UBE2FQ969M7 185 aa9.94□□□□□ -0.82
HDAC6-219ENST00000476625 RASD2Q96D21 266 aa9.94□□□□□ -0.82
HDAC6-219ENST00000476625 Q96M85 177 aa9.94□□□□□ -0.82
HDAC6-219ENST00000476625 RBP7Q96R05 134 aa9.94□□□□□ -0.82
HDAC6-219ENST00000476625 OR8B2Q96RD0 313 aa9.94□□□□□ -0.82
HDAC6-219ENST00000476625 PRDM13Q9H4Q3 707 aa9.94□□□□□ -0.82
HDAC6-219ENST00000476625 SMURF1Q9HCE7 757 aa9.94□□□□□ -0.82
HDAC6-219ENST00000476625 UFSP2Q9NUQ7 469 aa9.94□□□□□ -0.82
HDAC6-219ENST00000476625 TBCCD1Q9NVR7 557 aa9.94□□□□□ -0.82
HDAC6-219ENST00000476625 IL20RAQ9UHF4 553 aa9.94□□□□□ -0.82
HDAC6-219ENST00000476625 NDRG4Q9ULP0 352 aaKnown RBP9.94□□□□□ -0.82
HDAC6-219ENST00000476625 A4GNTQ9UNA3 340 aa9.94□□□□□ -0.82
HDAC6-219ENST00000476625 MED31Q9Y3C7 131 aa9.94□□□□□ -0.82
HDAC6-219ENST00000476625 NOTCH1P46531 2555 aa9.94□□□□□ -0.82
HDAC6-219ENST00000476625 A0A0U1RQK1 487 aa9.93□□□□□ -0.82
HDAC6-219ENST00000476625 CENPVL3A0A0U1RRI6 287 aa9.93□□□□□ -0.82
HDAC6-219ENST00000476625 C12orf71A8MTZ7 269 aa9.93□□□□□ -0.82
HDAC6-219ENST00000476625 C3orf80F5H4A9 247 aa9.93□□□□□ -0.82
HDAC6-219ENST00000476625 RER1O15258 196 aa9.93□□□□□ -0.82
HDAC6-219ENST00000476625 GPR137BO60478 399 aa9.93□□□□□ -0.82
HDAC6-219ENST00000476625 NDUFA7O95182 113 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms